RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 RBMY1A1P0DJD3 496 aaKnown RBP9.97□□□□□ -0.81
GTF2F1-201ENST00000394456 RBMY1CP0DJD4 496 aa9.97□□□□□ -0.81
GTF2F1-201ENST00000394456 RBMY1FQ15415 496 aaKnown RBP9.97□□□□□ -0.81
GTF2F1-201ENST00000394456 Q9UF83 564 aa9.97□□□□□ -0.81
GTF2F1-201ENST00000394456 WNK1Q9H4A3 2382 aa9.97□□□□□ -0.81
GTF2F1-201ENST00000394456 AKAP9Q99996 3911 aa9.97□□□□□ -0.81
GTF2F1-201ENST00000394456 ID1P41134 155 aa9.97□□□□□ -0.81
GTF2F1-201ENST00000394456 SH2D6Q7Z4S9 175 aa9.97□□□□□ -0.81
GTF2F1-201ENST00000394456 POM121L12Q8N7R1 296 aa9.97□□□□□ -0.81
GTF2F1-201ENST00000394456 OR5A1Q8NGJ0 315 aa9.97□□□□□ -0.81
GTF2F1-201ENST00000394456 ZNRF2Q8NHG8 242 aa9.97□□□□□ -0.81
GTF2F1-201ENST00000394456 NIPBLQ6KC79 2804 aaeCLIP9.96□□□□□ -0.81
GTF2F1-201ENST00000394456 P0DMU3 169 aa9.96□□□□□ -0.81
GTF2F1-201ENST00000394456 FAM231AP0DMU4 169 aa9.96□□□□□ -0.81
GTF2F1-201ENST00000394456 FAM231CP0DMU5 169 aa9.96□□□□□ -0.81
GTF2F1-201ENST00000394456 PROK1P58294 105 aa9.96□□□□□ -0.81
GTF2F1-201ENST00000394456 ZNF56Q15929 161 aa9.96□□□□□ -0.81
GTF2F1-201ENST00000394456 KNCNA6PVL3 124 aa9.96□□□□□ -0.82
GTF2F1-201ENST00000394456 K7EMT4 169 aa9.96□□□□□ -0.82
GTF2F1-201ENST00000394456 PLA2G2AP14555 144 aa9.96□□□□□ -0.82
GTF2F1-201ENST00000394456 IGHV3-64A0A075B6Q5 118 aa9.95□□□□□ -0.82
GTF2F1-201ENST00000394456 TMEM89A2RUT3 159 aa9.95□□□□□ -0.82
GTF2F1-201ENST00000394456 K7EQG2 157 aa9.95□□□□□ -0.82
GTF2F1-201ENST00000394456 SCGB1D4Q6XE38 83 aa9.95□□□□□ -0.82
GTF2F1-201ENST00000394456 C9orf85Q96MD7 179 aa9.95□□□□□ -0.82
GTF2F1-201ENST00000394456 SCGB2A2Q13296 93 aa9.94□□□□□ -0.82
GTF2F1-201ENST00000394456 FOXI2Q6ZQN5 318 aa9.94□□□□□ -0.82
GTF2F1-201ENST00000394456 ELANEP08246 267 aa9.94□□□□□ -0.82
GTF2F1-201ENST00000394456 HOXD3P31249 432 aaPredicted RBP9.94□□□□□ -0.82
GTF2F1-201ENST00000394456 SLURP1P55000 103 aa9.94□□□□□ -0.82
GTF2F1-201ENST00000394456 TMEM170BQ5T4T1 132 aa9.94□□□□□ -0.82
GTF2F1-201ENST00000394456 TRBV7-9A0A0J9YWB2 115 aa9.93□□□□□ -0.82
GTF2F1-201ENST00000394456 J3QKU1 62 aa9.93□□□□□ -0.82
GTF2F1-201ENST00000394456 M0QY20 66 aa9.93□□□□□ -0.82
GTF2F1-201ENST00000394456 RRN3P1Q2M238 152 aa9.93□□□□□ -0.82
GTF2F1-201ENST00000394456 PGPEP1Q9NXJ5 209 aa9.93□□□□□ -0.82
GTF2F1-201ENST00000394456 VCYO14598 125 aa9.92□□□□□ -0.82
GTF2F1-201ENST00000394456 INSL3P51460 131 aa9.92□□□□□ -0.82
GTF2F1-201ENST00000394456 ZNF876PQ49A33 203 aa9.92□□□□□ -0.82
GTF2F1-201ENST00000394456 KHDC1LQ5JSQ8 128 aa9.92□□□□□ -0.82
GTF2F1-201ENST00000394456 UBE2E2Q96LR5 201 aa9.92□□□□□ -0.82
GTF2F1-201ENST00000394456 IGHV1OR15-1A0A075B7D0 117 aa9.92□□□□□ -0.82
GTF2F1-201ENST00000394456 LINC01549A6NIU2 74 aa9.92□□□□□ -0.82
GTF2F1-201ENST00000394456 LGALS9O00182 355 aa9.92□□□□□ -0.82
GTF2F1-201ENST00000394456 APOMO95445 188 aa9.92□□□□□ -0.82
GTF2F1-201ENST00000394456 PMVKQ15126 192 aa9.92□□□□□ -0.82
GTF2F1-201ENST00000394456 TAL2Q16559 108 aa9.92□□□□□ -0.82
GTF2F1-201ENST00000394456 ETDBQ3ZM63 59 aa9.92□□□□□ -0.82
GTF2F1-201ENST00000394456 KIR2DL4Q99706 377 aa9.92□□□□□ -0.82
GTF2F1-201ENST00000394456 SNRPD3P62318 126 aaKnown RBP9.91□□□□□ -0.82
GTF2F1-201ENST00000394456 SRSF9Q13242 221 aaKnown RBP eCLIP9.91□□□□□ -0.82
GTF2F1-201ENST00000394456 CEMP1Q6PRD7 247 aaPredicted RBP9.91□□□□□ -0.82
GTF2F1-201ENST00000394456 RNASE13Q5GAN3 156 aaKnown RBP9.91□□□□□ -0.82
GTF2F1-201ENST00000394456 TRBV27A0A0K0K1C4 114 aa9.91□□□□□ -0.82
GTF2F1-201ENST00000394456 NOTCH3Q9UM47 2321 aa9.9□□□□□ -0.82
GTF2F1-201ENST00000394456 A0A1B0GWB2 263 aa9.9□□□□□ -0.82
GTF2F1-201ENST00000394456 RBMY1BA6NDE4 496 aaKnown RBP9.9□□□□□ -0.82
GTF2F1-201ENST00000394456 RBMY1EA6NEQ0 496 aaKnown RBP9.9□□□□□ -0.82
GTF2F1-201ENST00000394456 RBMY1DP0C7P1 496 aaKnown RBP9.9□□□□□ -0.82
GTF2F1-201ENST00000394456 TCTEX1D4Q5JR98 221 aa9.9□□□□□ -0.82
GTF2F1-201ENST00000394456 SPANXB1Q9NS25 103 aaPredicted RBP9.9□□□□□ -0.82
GTF2F1-201ENST00000394456 A0A0J9YY99 117 aa9.9□□□□□ -0.83
GTF2F1-201ENST00000394456 COTL1Q14019 142 aa9.9□□□□□ -0.83
GTF2F1-201ENST00000394456 PPP1R17O96001 155 aa9.89□□□□□ -0.83
GTF2F1-201ENST00000394456 DEFB131AP59861 70 aa9.89□□□□□ -0.83
GTF2F1-201ENST00000394456 PRO0461Q9UI25 63 aa9.89□□□□□ -0.83
GTF2F1-201ENST00000394456 Q6ZSN1 163 aa9.89□□□□□ -0.83
GTF2F1-201ENST00000394456 Q8N2B8 174 aa9.89□□□□□ -0.83
GTF2F1-201ENST00000394456 RNF152Q8N8N0 203 aa9.89□□□□□ -0.83
GTF2F1-201ENST00000394456 AMELXQ99217 191 aa9.89□□□□□ -0.83
GTF2F1-201ENST00000394456 MRPL16Q9NX20 251 aaKnown RBP9.89□□□□□ -0.83
GTF2F1-201ENST00000394456 DNAJC9-AS1A6NH13 148 aa9.88□□□□□ -0.83
GTF2F1-201ENST00000394456 C11orf44Q8N8P7 122 aa9.88□□□□□ -0.83
GTF2F1-201ENST00000394456 A0A0J9YXV3 536 aa9.88□□□□□ -0.83
GTF2F1-201ENST00000394456 ADARB2-AS1A8MUL3 147 aa9.88□□□□□ -0.83
GTF2F1-201ENST00000394456 TSPAN13O95857 204 aa9.88□□□□□ -0.83
GTF2F1-201ENST00000394456 RPL32P62910 135 aaKnown RBP9.87□□□□□ -0.83
GTF2F1-201ENST00000394456 Q6ZSV7 163 aa9.87□□□□□ -0.83
GTF2F1-201ENST00000394456 ESM1Q9NQ30 184 aa9.87□□□□□ -0.83
GTF2F1-201ENST00000394456 LOC107984156A0A0G2JMH3 177 aa9.87□□□□□ -0.83
GTF2F1-201ENST00000394456 TRBV6-5A0A0K0K1A5 114 aa9.87□□□□□ -0.83
GTF2F1-201ENST00000394456 UBE2D1P51668 147 aa9.87□□□□□ -0.83
GTF2F1-201ENST00000394456 ARL17AQ8IVW1 177 aa9.87□□□□□ -0.83
GTF2F1-201ENST00000394456 TIMM17AQ99595 171 aa9.87□□□□□ -0.83
GTF2F1-201ENST00000394456 EIF4EBP3O60516 100 aaPredicted RBP9.86□□□□□ -0.83
GTF2F1-201ENST00000394456 SMCPP49901 116 aaPredicted RBP9.86□□□□□ -0.83
GTF2F1-201ENST00000394456 FAM104AQ969W3 186 aa9.86□□□□□ -0.83
GTF2F1-201ENST00000394456 PTH2Q96A98 100 aa9.86□□□□□ -0.83
GTF2F1-201ENST00000394456 SPAG8Q99932 426 aaPredicted RBP9.86□□□□□ -0.83
GTF2F1-201ENST00000394456 LINC01619G3V211 115 aa9.86□□□□□ -0.83
GTF2F1-201ENST00000394456 KRTAP1-1Q07627 177 aa9.86□□□□□ -0.83
GTF2F1-201ENST00000394456 SYT8Q8NBV8 401 aa9.86□□□□□ -0.83
GTF2F1-201ENST00000394456 YAE1D1Q9NRH1 226 aa9.86□□□□□ -0.83
GTF2F1-201ENST00000394456 TSSC4Q9Y5U2 329 aaPredicted RBP9.86□□□□□ -0.83
GTF2F1-201ENST00000394456 JMJD1CQ15652 2540 aa9.86□□□□□ -0.83
GTF2F1-201ENST00000394456 GAGE13Q4V321 117 aa9.85□□□□□ -0.83
GTF2F1-201ENST00000394456 TMEM141Q96I45 108 aa9.85□□□□□ -0.83
GTF2F1-201ENST00000394456 GTSF1LQ9H1H1 148 aa9.85□□□□□ -0.83
GTF2F1-201ENST00000394456 NACAE9PAV3 2078 aa9.85□□□□□ -0.83
GTF2F1-201ENST00000394456 J3QQQ9 107 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms