RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 FOSL1P15407 271 aa5.3□□□□□ -1.56
SMAD1-202ENST00000394092 DEFB114Q30KQ6 69 aa5.3□□□□□ -1.56
SMAD1-202ENST00000394092 NEGR1Q7Z3B1 354 aa5.3□□□□□ -1.56
SMAD1-202ENST00000394092 CEND1Q8N111 149 aa5.3□□□□□ -1.56
SMAD1-202ENST00000394092 SPXQ9BT56 116 aa5.3□□□□□ -1.56
SMAD1-202ENST00000394092 ZANQ9Y493 2812 aa5.3□□□□□ -1.56
SMAD1-202ENST00000394092 CSMD2Q7Z408 3487 aa5.3□□□□□ -1.56
SMAD1-202ENST00000394092 CMC4P56277 68 aaPredicted RBP5.29□□□□□ -1.56
SMAD1-202ENST00000394092 FHL3Q13643 280 aa5.29□□□□□ -1.56
SMAD1-202ENST00000394092 AMMECR1LQ6DCA0 310 aa5.29□□□□□ -1.56
SMAD1-202ENST00000394092 TM2D2Q9BX73 214 aa5.29□□□□□ -1.56
SMAD1-202ENST00000394092 SORL1Q92673 2214 aa5.29□□□□□ -1.56
SMAD1-202ENST00000394092 KRTAP4-8A0A0G2JLE6 195 aa5.28□□□□□ -1.56
SMAD1-202ENST00000394092 GAGE10A6NGK3 116 aa5.28□□□□□ -1.56
SMAD1-202ENST00000394092 C11orf86A6NJI1 115 aa5.28□□□□□ -1.56
SMAD1-202ENST00000394092 J3QKU1 62 aa5.28□□□□□ -1.56
SMAD1-202ENST00000394092 K7EP13 123 aa5.28□□□□□ -1.56
SMAD1-202ENST00000394092 RBMY1A1P0DJD3 496 aaKnown RBP5.28□□□□□ -1.56
SMAD1-202ENST00000394092 RBMY1CP0DJD4 496 aa5.28□□□□□ -1.56
SMAD1-202ENST00000394092 RBMY1FQ15415 496 aaKnown RBP5.28□□□□□ -1.56
SMAD1-202ENST00000394092 CD300EQ496F6 205 aaPredicted RBP5.28□□□□□ -1.56
SMAD1-202ENST00000394092 MORN3Q6PF18 240 aaPredicted RBP5.28□□□□□ -1.56
SMAD1-202ENST00000394092 OR5A1Q8NGJ0 315 aa5.28□□□□□ -1.56
SMAD1-202ENST00000394092 HIST1H4GQ99525 98 aa5.28□□□□□ -1.56
SMAD1-202ENST00000394092 PRADC1Q9BSG0 188 aa5.28□□□□□ -1.56
SMAD1-202ENST00000394092 TTTY13Q9BZ97 58 aa5.28□□□□□ -1.56
SMAD1-202ENST00000394092 TSSC4Q9Y5U2 329 aaPredicted RBP5.28□□□□□ -1.56
SMAD1-202ENST00000394092 CENPEQ02224 2701 aa5.28□□□□□ -1.56
SMAD1-202ENST00000394092 MYO9AB2RTY4 2548 aa5.28□□□□□ -1.56
SMAD1-202ENST00000394092 EPG5Q9HCE0 2579 aa5.28□□□□□ -1.56
SMAD1-202ENST00000394092 TMEM238LA0A1B0GVL6 79 aa5.28□□□□□ -1.56
SMAD1-202ENST00000394092 RBMY1BA6NDE4 496 aaKnown RBP5.28□□□□□ -1.56
SMAD1-202ENST00000394092 RBMY1EA6NEQ0 496 aaKnown RBP5.28□□□□□ -1.56
SMAD1-202ENST00000394092 A6NJY4 79 aa5.28□□□□□ -1.56
SMAD1-202ENST00000394092 H3BUT2 72 aa5.28□□□□□ -1.56
SMAD1-202ENST00000394092 CCL24O00175 119 aa5.28□□□□□ -1.56
SMAD1-202ENST00000394092 RNASE1P07998 156 aaKnown RBP5.28□□□□□ -1.56
SMAD1-202ENST00000394092 RBMY1DP0C7P1 496 aaKnown RBP5.28□□□□□ -1.56
SMAD1-202ENST00000394092 FABP2P12104 132 aa5.28□□□□□ -1.56
SMAD1-202ENST00000394092 HTN1P15515 57 aa5.28□□□□□ -1.56
SMAD1-202ENST00000394092 FXYD2P54710 66 aa5.28□□□□□ -1.56
SMAD1-202ENST00000394092 RPL39P62891 51 aaKnown RBP5.28□□□□□ -1.56
SMAD1-202ENST00000394092 STHQ8IWL8 128 aa5.28□□□□□ -1.56
SMAD1-202ENST00000394092 C20orf203Q8NBC4 194 aa5.28□□□□□ -1.56
SMAD1-202ENST00000394092 LINC01587Q99440 93 aa5.28□□□□□ -1.56
SMAD1-202ENST00000394092 CST9LQ9H4G1 147 aa5.28□□□□□ -1.56
SMAD1-202ENST00000394092 C16orf95Q9H693 158 aa5.28□□□□□ -1.56
SMAD1-202ENST00000394092 TEX15Q9BXT5 2789 aa5.27□□□□□ -1.57
SMAD1-202ENST00000394092 NACAE9PAV3 2078 aa5.27□□□□□ -1.57
SMAD1-202ENST00000394092 MXRA5Q9NR99 2828 aa5.27□□□□□ -1.57
SMAD1-202ENST00000394092 ITPR3Q14573 2671 aa5.27□□□□□ -1.57
SMAD1-202ENST00000394092 IGLV4-69A0A075B6H9 119 aa5.27□□□□□ -1.57
SMAD1-202ENST00000394092 A0A1W2PPM0 123 aa5.27□□□□□ -1.57
SMAD1-202ENST00000394092 ZNF815PA8K554 130 aa5.27□□□□□ -1.57
SMAD1-202ENST00000394092 K7EP34 96 aa5.27□□□□□ -1.57
SMAD1-202ENST00000394092 TSHBP01222 138 aa5.27□□□□□ -1.57
SMAD1-202ENST00000394092 CRYBA4P53673 196 aa5.27□□□□□ -1.57
SMAD1-202ENST00000394092 SCGB1D4Q6XE38 83 aa5.27□□□□□ -1.57
SMAD1-202ENST00000394092 ZNF418Q8TF45 676 aaPredicted RBP5.27□□□□□ -1.57
SMAD1-202ENST00000394092 RAB37Q96AX2 223 aa5.27□□□□□ -1.57
SMAD1-202ENST00000394092 DNAJC30Q96LL9 226 aa5.27□□□□□ -1.57
SMAD1-202ENST00000394092 YAE1D1Q9NRH1 226 aa5.27□□□□□ -1.57
SMAD1-202ENST00000394092 NHP2Q9NX24 153 aaKnown RBP5.27□□□□□ -1.57
SMAD1-202ENST00000394092 TNFRSF18Q9Y5U5 241 aa5.27□□□□□ -1.57
SMAD1-202ENST00000394092 APCP25054 2843 aa5.27□□□□□ -1.57
SMAD1-202ENST00000394092 PLA2G2AP14555 144 aa5.26□□□□□ -1.57
SMAD1-202ENST00000394092 TMEM170BQ5T4T1 132 aa5.26□□□□□ -1.57
SMAD1-202ENST00000394092 NFE4Q86UQ8 179 aa5.26□□□□□ -1.57
SMAD1-202ENST00000394092 MAPKAPK5-AS1Q8N8E1 139 aa5.26□□□□□ -1.57
SMAD1-202ENST00000394092 PYGO1Q9Y3Y4 419 aa5.26□□□□□ -1.57
SMAD1-202ENST00000394092 TRBV7-3A0A075B6L6 115 aa5.25□□□□□ -1.57
SMAD1-202ENST00000394092 A0A1W2PRX2 142 aa5.25□□□□□ -1.57
SMAD1-202ENST00000394092 CD28P10747 220 aa5.25□□□□□ -1.57
SMAD1-202ENST00000394092 ODF3L2Q3SX64 289 aa5.25□□□□□ -1.57
SMAD1-202ENST00000394092 SAMD5Q5TGI4 173 aa5.25□□□□□ -1.57
SMAD1-202ENST00000394092 UFSP1Q6NVU6 142 aa5.25□□□□□ -1.57
SMAD1-202ENST00000394092 C11orf72Q8NBR9 251 aa5.25□□□□□ -1.57
SMAD1-202ENST00000394092 VCX2Q9H322 139 aa5.25□□□□□ -1.57
SMAD1-202ENST00000394092 ESM1Q9NQ30 184 aa5.25□□□□□ -1.57
SMAD1-202ENST00000394092 CBY1Q9Y3M2 126 aa5.25□□□□□ -1.57
SMAD1-202ENST00000394092 SPCS1Q9Y6A9 102 aa5.25□□□□□ -1.57
SMAD1-202ENST00000394092 GAGE12BA1L429 117 aa5.24□□□□□ -1.57
SMAD1-202ENST00000394092 RS1O15537 224 aa5.24□□□□□ -1.57
SMAD1-202ENST00000394092 IGHV3-53P01767 116 aa5.24□□□□□ -1.57
SMAD1-202ENST00000394092 LGALS3P17931 250 aaKnown RBP5.24□□□□□ -1.57
SMAD1-202ENST00000394092 BEAN1Q3B7T3 259 aa5.24□□□□□ -1.57
SMAD1-202ENST00000394092 CFAP126Q5VTH2 177 aa5.24□□□□□ -1.57
SMAD1-202ENST00000394092 FAM110AQ9BQ89 295 aa5.24□□□□□ -1.57
SMAD1-202ENST00000394092 SPANXA1Q9NS26 97 aa5.24□□□□□ -1.57
SMAD1-202ENST00000394092 TLN2Q9Y4G6 2542 aa5.24□□□□□ -1.57
SMAD1-202ENST00000394092 IGHV3-73A0A0B4J1V6 119 aa5.24□□□□□ -1.57
SMAD1-202ENST00000394092 A0A1B0GWB2 263 aa5.24□□□□□ -1.57
SMAD1-202ENST00000394092 LEPROTO15243 131 aa5.24□□□□□ -1.57
SMAD1-202ENST00000394092 NDUFA7O95182 113 aa5.24□□□□□ -1.57
SMAD1-202ENST00000394092 P0DMU3 169 aa5.24□□□□□ -1.57
SMAD1-202ENST00000394092 FAM231AP0DMU4 169 aa5.24□□□□□ -1.57
SMAD1-202ENST00000394092 FAM231CP0DMU5 169 aa5.24□□□□□ -1.57
SMAD1-202ENST00000394092 HILS1P60008 231 aa5.24□□□□□ -1.57
SMAD1-202ENST00000394092 KRTAP1-1Q07627 177 aa5.24□□□□□ -1.57
SMAD1-202ENST00000394092 SRSF9Q13242 221 aaKnown RBP eCLIP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms