RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 RNASE3P12724 160 aaKnown RBP10.92□□□□□ -0.66
SFXN3-202ENST00000393459 PMVKQ15126 192 aa10.92□□□□□ -0.66
SFXN3-202ENST00000393459 MDFICQ9P1T7 246 aa10.92□□□□□ -0.66
SFXN3-202ENST00000393459 ABCA12Q86UK0 2595 aa10.92□□□□□ -0.66
SFXN3-202ENST00000393459 NDUFV3P56181 108 aaKnown RBP10.91□□□□□ -0.66
SFXN3-202ENST00000393459 Q9UF83 564 aa10.91□□□□□ -0.66
SFXN3-202ENST00000393459 ZFYVE26Q68DK2 2539 aa10.91□□□□□ -0.66
SFXN3-202ENST00000393459 PROK1P58294 105 aa10.91□□□□□ -0.66
SFXN3-202ENST00000393459 GPHB5Q86YW7 130 aa10.91□□□□□ -0.66
SFXN3-202ENST00000393459 EEF1AKMT3Q96AZ1 226 aa10.91□□□□□ -0.66
SFXN3-202ENST00000393459 RNF5Q99942 180 aa10.91□□□□□ -0.66
SFXN3-202ENST00000393459 TMEM95Q3KNT9 176 aa10.9□□□□□ -0.66
SFXN3-202ENST00000393459 TRAV8-4A0A0B4J246 113 aa10.9□□□□□ -0.66
SFXN3-202ENST00000393459 PIEZO1Q92508 2521 aa10.9□□□□□ -0.66
SFXN3-202ENST00000393459 C2orf82Q6UX34 121 aa10.9□□□□□ -0.67
SFXN3-202ENST00000393459 CHD6Q8TD26 2715 aa10.9□□□□□ -0.67
SFXN3-202ENST00000393459 IGHV3-38A0A0C4DH36 116 aa10.89□□□□□ -0.67
SFXN3-202ENST00000393459 LINC01546A6NGU7 62 aa10.89□□□□□ -0.67
SFXN3-202ENST00000393459 FBXL19-AS1Q494R0 122 aa10.89□□□□□ -0.67
SFXN3-202ENST00000393459 LYRM7Q5U5X0 104 aa10.89□□□□□ -0.67
SFXN3-202ENST00000393459 COX8CQ7Z4L0 72 aa10.89□□□□□ -0.67
SFXN3-202ENST00000393459 NBEAL2Q6ZNJ1 2754 aa10.89□□□□□ -0.67
SFXN3-202ENST00000393459 TRIAP1O43715 76 aa10.88□□□□□ -0.67
SFXN3-202ENST00000393459 IGHV3-33P01772 117 aa10.88□□□□□ -0.67
SFXN3-202ENST00000393459 SLC25A29Q8N8R3 303 aa10.88□□□□□ -0.67
SFXN3-202ENST00000393459 GAGE12JA6NER3 117 aa10.88□□□□□ -0.67
SFXN3-202ENST00000393459 GAGE7O76087 117 aa10.88□□□□□ -0.67
SFXN3-202ENST00000393459 GAGE12FP0CL80 117 aa10.88□□□□□ -0.67
SFXN3-202ENST00000393459 GAGE12GP0CL81 117 aa10.88□□□□□ -0.67
SFXN3-202ENST00000393459 GAGE12IP0CL82 117 aa10.88□□□□□ -0.67
SFXN3-202ENST00000393459 IFITM1P13164 125 aa10.88□□□□□ -0.67
SFXN3-202ENST00000393459 GAGE4Q13068 117 aa10.88□□□□□ -0.67
SFXN3-202ENST00000393459 ZNF876PQ49A33 203 aa10.88□□□□□ -0.67
SFXN3-202ENST00000393459 PSMG4Q5JS54 123 aa10.88□□□□□ -0.67
SFXN3-202ENST00000393459 C9orf47Q6ZRZ4 202 aa10.88□□□□□ -0.67
SFXN3-202ENST00000393459 UBE2E1P51965 193 aa10.88□□□□□ -0.67
SFXN3-202ENST00000393459 SPINK13Q1W4C9 94 aa10.88□□□□□ -0.67
SFXN3-202ENST00000393459 MEIG1Q5JSS6 88 aa10.88□□□□□ -0.67
SFXN3-202ENST00000393459 ZNF22P17026 224 aaPredicted RBP10.87□□□□□ -0.67
SFXN3-202ENST00000393459 LINC01620Q4KN68 170 aa10.87□□□□□ -0.67
SFXN3-202ENST00000393459 LRRK2Q5S007 2527 aa10.87□□□□□ -0.67
SFXN3-202ENST00000393459 FAM110DQ8TAY7 271 aaPredicted RBP10.87□□□□□ -0.67
SFXN3-202ENST00000393459 IGIPA6NJ69 53 aa10.86□□□□□ -0.67
SFXN3-202ENST00000393459 ATP6V0E2Q8NHE4 81 aa10.86□□□□□ -0.67
SFXN3-202ENST00000393459 RHPN1-AS1Q9BWJ2 59 aa10.86□□□□□ -0.67
SFXN3-202ENST00000393459 TRBV7-9A0A0J9YWB2 115 aa10.86□□□□□ -0.67
SFXN3-202ENST00000393459 ODF3BA8MYP8 253 aa10.86□□□□□ -0.67
SFXN3-202ENST00000393459 TMEM262E9PQX1 116 aa10.86□□□□□ -0.67
SFXN3-202ENST00000393459 BLCAPP62952 87 aa10.86□□□□□ -0.67
SFXN3-202ENST00000393459 ADAMTSL4-AS1Q5T5F5 129 aa10.86□□□□□ -0.67
SFXN3-202ENST00000393459 MRPL23Q16540 153 aaKnown RBP10.85□□□□□ -0.67
SFXN3-202ENST00000393459 VCX2Q9H322 139 aa10.85□□□□□ -0.67
SFXN3-202ENST00000393459 LY6G5BQ8NDX9 201 aa10.85□□□□□ -0.67
SFXN3-202ENST00000393459 BPESC1Q9GZL8 116 aa10.85□□□□□ -0.67
SFXN3-202ENST00000393459 MXRA5Q9NR99 2828 aa10.84□□□□□ -0.67
SFXN3-202ENST00000393459 RPL32P62910 135 aaKnown RBP10.84□□□□□ -0.67
SFXN3-202ENST00000393459 C10orf99Q6UWK7 81 aa10.84□□□□□ -0.67
SFXN3-202ENST00000393459 ABCA2Q9BZC7 2435 aa10.84□□□□□ -0.67
SFXN3-202ENST00000393459 TRAV41A0A0B4J266 112 aa10.84□□□□□ -0.67
SFXN3-202ENST00000393459 IGHV3-16A0A0C4DH30 117 aa10.84□□□□□ -0.67
SFXN3-202ENST00000393459 A0A1W2PPR1 153 aa10.84□□□□□ -0.67
SFXN3-202ENST00000393459 H3BMM0 161 aa10.83□□□□□ -0.68
SFXN3-202ENST00000393459 VCYO14598 125 aa10.83□□□□□ -0.68
SFXN3-202ENST00000393459 UBE2WQ96B02 151 aa10.83□□□□□ -0.68
SFXN3-202ENST00000393459 CD28P10747 220 aa10.83□□□□□ -0.68
SFXN3-202ENST00000393459 ODF3Q96PU9 254 aa10.83□□□□□ -0.68
SFXN3-202ENST00000393459 SYNJ2BPP57105 145 aa10.83□□□□□ -0.68
SFXN3-202ENST00000393459 TMEM263Q8WUH6 116 aaKnown RBP10.83□□□□□ -0.68
SFXN3-202ENST00000393459 RHODO00212 210 aa10.82□□□□□ -0.68
SFXN3-202ENST00000393459 C9orf139Q6ZV77 190 aa10.82□□□□□ -0.68
SFXN3-202ENST00000393459 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.82□□□□□ -0.68
SFXN3-202ENST00000393459 IGKV2-29A2NJV5 120 aaPredicted RBP10.82□□□□□ -0.68
SFXN3-202ENST00000393459 ADORA2A-AS1P86434 159 aa10.82□□□□□ -0.68
SFXN3-202ENST00000393459 ATXN8Q156A1 80 aa10.82□□□□□ -0.68
SFXN3-202ENST00000393459 CITED1Q99966 193 aa10.82□□□□□ -0.68
SFXN3-202ENST00000393459 SRSF2Q01130 221 aaKnown RBP10.81□□□□□ -0.68
SFXN3-202ENST00000393459 Q8N6K4 173 aa10.81□□□□□ -0.68
SFXN3-202ENST00000393459 AMELXQ99217 191 aa10.81□□□□□ -0.68
SFXN3-202ENST00000393459 KLK5Q9Y337 293 aaPredicted RBP10.81□□□□□ -0.68
SFXN3-202ENST00000393459 A0A0J9YXY3 114 aa10.81□□□□□ -0.68
SFXN3-202ENST00000393459 IGHV3-30-3P0DP02 117 aa10.81□□□□□ -0.68
SFXN3-202ENST00000393459 LINC00315P59091 139 aa10.81□□□□□ -0.68
SFXN3-202ENST00000393459 CENPVL3A0A0U1RRI6 287 aa10.8□□□□□ -0.68
SFXN3-202ENST00000393459 MTORP42345 2549 aa10.8□□□□□ -0.68
SFXN3-202ENST00000393459 HOXD3P31249 432 aaPredicted RBP10.8□□□□□ -0.68
SFXN3-202ENST00000393459 POLR2KP53803 58 aaKnown RBP10.8□□□□□ -0.68
SFXN3-202ENST00000393459 TIMM21Q9BVV7 248 aa10.8□□□□□ -0.68
SFXN3-202ENST00000393459 IGHV4-4A0A075B6R2 117 aa10.79□□□□□ -0.68
SFXN3-202ENST00000393459 MINOS1Q5TGZ0 78 aa10.79□□□□□ -0.68
SFXN3-202ENST00000393459 PRORYQ9H606 182 aa10.79□□□□□ -0.68
SFXN3-202ENST00000393459 FAM236AA0A1B0GUQ0 79 aa10.78□□□□□ -0.68
SFXN3-202ENST00000393459 FAM236BA0A1B0GV22 79 aa10.78□□□□□ -0.68
SFXN3-202ENST00000393459 H7C423 109 aa10.78□□□□□ -0.68
SFXN3-202ENST00000393459 M0R1W7 72 aa10.78□□□□□ -0.68
SFXN3-202ENST00000393459 PKD1L2Q7Z442 2459 aa10.78□□□□□ -0.68
SFXN3-202ENST00000393459 NDUFA12Q9UI09 145 aa10.78□□□□□ -0.68
SFXN3-202ENST00000393459 IGKV3OR2-268A0A0C4DH90 116 aa10.78□□□□□ -0.68
SFXN3-202ENST00000393459 M0R2P5 195 aa10.78□□□□□ -0.68
SFXN3-202ENST00000393459 RPL13AP40429 203 aaKnown RBP10.78□□□□□ -0.68
SFXN3-202ENST00000393459 ITLN2Q8WWU7 325 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms