RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 TRBV7-3A0A075B6L6 115 aa9.18□□□□□ -0.94
USP44-202ENST00000393091 LINC01546A6NGU7 62 aa9.18□□□□□ -0.94
USP44-202ENST00000393091 DAZ4Q86SG3 579 aaKnown RBP9.18□□□□□ -0.94
USP44-202ENST00000393091 C20orf78Q9BR46 151 aa9.18□□□□□ -0.94
USP44-202ENST00000393091 DAZ3Q9NR90 486 aaKnown RBP9.18□□□□□ -0.94
USP44-202ENST00000393091 MRPL51Q4U2R6 128 aaKnown RBP9.17□□□□□ -0.94
USP44-202ENST00000393091 MRPS16Q9Y3D3 137 aaKnown RBP9.17□□□□□ -0.94
USP44-202ENST00000393091 MUC21A0A0G2JKD1 596 aa9.17□□□□□ -0.94
USP44-202ENST00000393091 MUC21A0A140T8X8 626 aa9.17□□□□□ -0.94
USP44-202ENST00000393091 NCR2O95944 276 aa9.17□□□□□ -0.94
USP44-202ENST00000393091 BTF3P20290 206 aaKnown RBP9.17□□□□□ -0.94
USP44-202ENST00000393091 ZNF56Q15929 161 aa9.16□□□□□ -0.94
USP44-202ENST00000393091 TGP01266 2768 aa9.16□□□□□ -0.94
USP44-202ENST00000393091 K7EP13 123 aa9.16□□□□□ -0.94
USP44-202ENST00000393091 P0DMU3 169 aa9.16□□□□□ -0.94
USP44-202ENST00000393091 FAM231AP0DMU4 169 aa9.16□□□□□ -0.94
USP44-202ENST00000393091 FAM231CP0DMU5 169 aa9.16□□□□□ -0.94
USP44-202ENST00000393091 GYPEP15421 78 aa9.16□□□□□ -0.94
USP44-202ENST00000393091 POLR2KP53803 58 aaKnown RBP9.16□□□□□ -0.94
USP44-202ENST00000393091 AMN1Q8IY45 258 aa9.16□□□□□ -0.94
USP44-202ENST00000393091 TRBV27A0A0K0K1C4 114 aa9.15□□□□□ -0.94
USP44-202ENST00000393091 RPL36AP83881 106 aaKnown RBP9.15□□□□□ -0.94
USP44-202ENST00000393091 MRPL54Q6P161 138 aaKnown RBP9.15□□□□□ -0.94
USP44-202ENST00000393091 RPL36ALQ969Q0 106 aaKnown RBP9.15□□□□□ -0.94
USP44-202ENST00000393091 LYPD5Q6UWN5 251 aa9.15□□□□□ -0.95
USP44-202ENST00000393091 NEGR1Q7Z3B1 354 aa9.15□□□□□ -0.95
USP44-202ENST00000393091 K7EMI3 77 aa9.14□□□□□ -0.95
USP44-202ENST00000393091 TCAPO15273 167 aa9.14□□□□□ -0.95
USP44-202ENST00000393091 FAM74A4Q5TZK3 123 aa9.14□□□□□ -0.95
USP44-202ENST00000393091 COLCA2A8K830 154 aa9.14□□□□□ -0.95
USP44-202ENST00000393091 IGLL5B9A064 214 aa9.14□□□□□ -0.95
USP44-202ENST00000393091 SRIP30626 198 aa9.14□□□□□ -0.95
USP44-202ENST00000393091 TGIF2-C20orf24A0A0A6YYL0 155 aa9.13□□□□□ -0.95
USP44-202ENST00000393091 IGHV3-73A0A0B4J1V6 119 aa9.13□□□□□ -0.95
USP44-202ENST00000393091 LELP1Q5T871 98 aa9.13□□□□□ -0.95
USP44-202ENST00000393091 ATP6V0E2Q8NHE4 81 aa9.13□□□□□ -0.95
USP44-202ENST00000393091 H7C423 109 aa9.12□□□□□ -0.95
USP44-202ENST00000393091 ORMDL3Q8N138 153 aa9.12□□□□□ -0.95
USP44-202ENST00000393091 IGLV2-18A0A075B6J9 118 aa9.12□□□□□ -0.95
USP44-202ENST00000393091 LOC100131303A0A0U1RQF7 123 aa9.12□□□□□ -0.95
USP44-202ENST00000393091 ATP6V1G1O75348 118 aa9.12□□□□□ -0.95
USP44-202ENST00000393091 MGPP08493 103 aa9.12□□□□□ -0.95
USP44-202ENST00000393091 HTN3P15516 51 aa9.12□□□□□ -0.95
USP44-202ENST00000393091 CHCHD7Q9BUK0 85 aa9.12□□□□□ -0.95
USP44-202ENST00000393091 Q9UF83 564 aa9.12□□□□□ -0.95
USP44-202ENST00000393091 CAMPP49913 170 aa9.12□□□□□ -0.95
USP44-202ENST00000393091 PKIAP61925 76 aa9.12□□□□□ -0.95
USP44-202ENST00000393091 ESRGQ1W209 222 aa9.12□□□□□ -0.95
USP44-202ENST00000393091 IQCJQ1A5X6 159 aa9.11□□□□□ -0.95
USP44-202ENST00000393091 A0A0J9YY99 117 aa9.11□□□□□ -0.95
USP44-202ENST00000393091 OR10J3Q5JRS4 329 aa9.11□□□□□ -0.95
USP44-202ENST00000393091 ZFAND6Q6FIF0 208 aa9.11□□□□□ -0.95
USP44-202ENST00000393091 CBLN2Q8IUK8 224 aa9.11□□□□□ -0.95
USP44-202ENST00000393091 LINC00476Q8WZB0 136 aa9.11□□□□□ -0.95
USP44-202ENST00000393091 LINC00588Q9Y4M8 146 aa9.11□□□□□ -0.95
USP44-202ENST00000393091 F5H697 171 aa9.1□□□□□ -0.95
USP44-202ENST00000393091 APCSP02743 223 aa9.1□□□□□ -0.95
USP44-202ENST00000393091 TNFRSF18Q9Y5U5 241 aa9.1□□□□□ -0.95
USP44-202ENST00000393091 ZNRF2Q8NHG8 242 aa9.1□□□□□ -0.95
USP44-202ENST00000393091 TMEM70Q9BUB7 260 aa9.1□□□□□ -0.95
USP44-202ENST00000393091 ST20Q9HBF5 79 aa9.1□□□□□ -0.95
USP44-202ENST00000393091 TNFRSF6BO95407 300 aa9.1□□□□□ -0.95
USP44-202ENST00000393091 ALKBH7Q9BT30 221 aaPredicted RBP9.1□□□□□ -0.95
USP44-202ENST00000393091 LCE6AA0A183 80 aa9.09□□□□□ -0.95
USP44-202ENST00000393091 D6R8Y8 96 aa9.09□□□□□ -0.95
USP44-202ENST00000393091 DNAH10OSP0CZ25 163 aa9.09□□□□□ -0.95
USP44-202ENST00000393091 SUMO2P61956 95 aaKnown RBP9.09□□□□□ -0.95
USP44-202ENST00000393091 RPL39LQ96EH5 51 aaKnown RBP9.09□□□□□ -0.95
USP44-202ENST00000393091 URGCP-MRPS24S4R325 110 aa9.09□□□□□ -0.95
USP44-202ENST00000393091 TRAV26-2A0A0B4J265 109 aa9.09□□□□□ -0.95
USP44-202ENST00000393091 I3L3M4 83 aa9.09□□□□□ -0.95
USP44-202ENST00000393091 GAS8-AS1O95177 125 aa9.09□□□□□ -0.95
USP44-202ENST00000393091 CKS2P33552 79 aa9.09□□□□□ -0.95
USP44-202ENST00000393091 RPS10P46783 165 aaKnown RBP9.09□□□□□ -0.95
USP44-202ENST00000393091 CCL18P55774 89 aa9.09□□□□□ -0.95
USP44-202ENST00000393091 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.09□□□□□ -0.95
USP44-202ENST00000393091 MRPL18Q9H0U6 180 aaKnown RBP9.09□□□□□ -0.95
USP44-202ENST00000393091 SACSQ9NZJ4 4579 aa9.09□□□□□ -0.96
USP44-202ENST00000393091 TRBV6-8A0A0A6YYG3 113 aa9.08□□□□□ -0.96
USP44-202ENST00000393091 VCYO14598 125 aa9.08□□□□□ -0.96
USP44-202ENST00000393091 ESDP10768 282 aa9.08□□□□□ -0.96
USP44-202ENST00000393091 GAGE12JA6NER3 117 aa9.08□□□□□ -0.96
USP44-202ENST00000393091 NPSP0C0P6 89 aa9.08□□□□□ -0.96
USP44-202ENST00000393091 GAGE1Q13065 139 aa9.08□□□□□ -0.96
USP44-202ENST00000393091 GAGE4Q13068 117 aa9.08□□□□□ -0.96
USP44-202ENST00000393091 GAGE5Q13069 117 aa9.08□□□□□ -0.96
USP44-202ENST00000393091 GAGE13Q4V321 117 aa9.08□□□□□ -0.96
USP44-202ENST00000393091 NTM-AS1Q6ZSK4 140 aa9.08□□□□□ -0.96
USP44-202ENST00000393091 PRELID3AQ96N28 172 aa9.08□□□□□ -0.96
USP44-202ENST00000393091 TSHBP01222 138 aa9.08□□□□□ -0.96
USP44-202ENST00000393091 SDHAF1A6NFY7 115 aa9.07□□□□□ -0.96
USP44-202ENST00000393091 NUDT3O95989 172 aa9.07□□□□□ -0.96
USP44-202ENST00000393091 SMIM2Q9BVW6 85 aa9.07□□□□□ -0.96
USP44-202ENST00000393091 NPYP01303 97 aa9.07□□□□□ -0.96
USP44-202ENST00000393091 LINC01556Q5JQF7 62 aa9.07□□□□□ -0.96
USP44-202ENST00000393091 RAB5AP20339 215 aa9.06□□□□□ -0.96
USP44-202ENST00000393091 Q8N8P6 123 aa9.06□□□□□ -0.96
USP44-202ENST00000393091 TIMM21Q9BVV7 248 aa9.06□□□□□ -0.96
USP44-202ENST00000393091 TRAPPC1Q9Y5R8 145 aa9.06□□□□□ -0.96
USP44-202ENST00000393091 A0A1B0GUV1 79 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms