RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 CFAP126Q5VTH2 177 aa9.69□□□□□ -0.86
PTN-202ENST00000393083 Q6ZTI0 123 aa9.69□□□□□ -0.86
PTN-202ENST00000393083 NXT2Q9NPJ8 142 aaKnown RBP9.69□□□□□ -0.86
PTN-202ENST00000393083 X6R8D5 127 aa9.69□□□□□ -0.86
PTN-202ENST00000393083 DNAH7Q8WXX0 4024 aa9.68□□□□□ -0.86
PTN-202ENST00000393083 SMIM9A6NGZ8 99 aa9.68□□□□□ -0.86
PTN-202ENST00000393083 LGALS9BQ3B8N2 356 aa9.68□□□□□ -0.86
PTN-202ENST00000393083 UFSP1Q6NVU6 142 aa9.68□□□□□ -0.86
PTN-202ENST00000393083 Q8N8P6 123 aa9.68□□□□□ -0.86
PTN-202ENST00000393083 OR11H2Q8NH07 326 aa9.68□□□□□ -0.86
PTN-202ENST00000393083 SMIM2Q9BVW6 85 aa9.68□□□□□ -0.86
PTN-202ENST00000393083 PRSS47A8MTI9 375 aa9.67□□□□□ -0.86
PTN-202ENST00000393083 SUMO2P61956 95 aaKnown RBP9.67□□□□□ -0.86
PTN-202ENST00000393083 C20orf78Q9BR46 151 aa9.67□□□□□ -0.86
PTN-202ENST00000393083 IGLV2-18A0A075B6J9 118 aa9.67□□□□□ -0.86
PTN-202ENST00000393083 M0QY20 66 aa9.67□□□□□ -0.86
PTN-202ENST00000393083 EMP1P54849 157 aa9.67□□□□□ -0.86
PTN-202ENST00000393083 OR4C5Q8NGB2 326 aa9.67□□□□□ -0.86
PTN-202ENST00000393083 ST20Q9HBF5 79 aa9.67□□□□□ -0.86
PTN-202ENST00000393083 TRAV4A0A0B4J268 109 aa9.66□□□□□ -0.86
PTN-202ENST00000393083 GAGE12BA1L429 117 aa9.66□□□□□ -0.86
PTN-202ENST00000393083 H7C1H1 209 aa9.66□□□□□ -0.86
PTN-202ENST00000393083 GAGE7O76087 117 aa9.66□□□□□ -0.86
PTN-202ENST00000393083 GAGE12FP0CL80 117 aa9.66□□□□□ -0.86
PTN-202ENST00000393083 GAGE12GP0CL81 117 aa9.66□□□□□ -0.86
PTN-202ENST00000393083 GAGE12IP0CL82 117 aa9.66□□□□□ -0.86
PTN-202ENST00000393083 SMIM6P0DI80 62 aa9.66□□□□□ -0.86
PTN-202ENST00000393083 A0A0J9YWU9 116 aa9.65□□□□□ -0.86
PTN-202ENST00000393083 LINC01546A6NGU7 62 aa9.65□□□□□ -0.86
PTN-202ENST00000393083 ZFP2Q6ZN57 461 aa9.65□□□□□ -0.86
PTN-202ENST00000393083 Q8NAQ8 132 aa9.65□□□□□ -0.86
PTN-202ENST00000393083 TRGV2A0A075B6R0 118 aa9.64□□□□□ -0.87
PTN-202ENST00000393083 TRBV6-5A0A0K0K1A5 114 aa9.64□□□□□ -0.87
PTN-202ENST00000393083 IGHV3-53P01767 116 aa9.64□□□□□ -0.87
PTN-202ENST00000393083 A0A096LNJ9 63 aa9.63□□□□□ -0.87
PTN-202ENST00000393083 TCAPO15273 167 aa9.63□□□□□ -0.87
PTN-202ENST00000393083 LEPROTL1O95214 131 aa9.63□□□□□ -0.87
PTN-202ENST00000393083 HBDP02042 147 aa9.63□□□□□ -0.87
PTN-202ENST00000393083 KRTDAPP60985 99 aa9.63□□□□□ -0.87
PTN-202ENST00000393083 RPL32P62910 135 aaKnown RBP9.63□□□□□ -0.87
PTN-202ENST00000393083 PYY3Q5JQD4 70 aa9.63□□□□□ -0.87
PTN-202ENST00000393083 Q6ZSN1 163 aa9.63□□□□□ -0.87
PTN-202ENST00000393083 ZNF479Q96JC4 524 aa9.63□□□□□ -0.87
PTN-202ENST00000393083 TMEM70Q9BUB7 260 aa9.63□□□□□ -0.87
PTN-202ENST00000393083 C11orf68Q9H3H3 251 aaKnown RBP9.63□□□□□ -0.87
PTN-202ENST00000393083 NIT2Q9NQR4 276 aa9.63□□□□□ -0.87
PTN-202ENST00000393083 IGHV4-28A0A0C4DH34 117 aa9.63□□□□□ -0.87
PTN-202ENST00000393083 SDHAF1A6NFY7 115 aa9.63□□□□□ -0.87
PTN-202ENST00000393083 P0DMU3 169 aa9.63□□□□□ -0.87
PTN-202ENST00000393083 FAM231AP0DMU4 169 aa9.63□□□□□ -0.87
PTN-202ENST00000393083 FAM231CP0DMU5 169 aa9.63□□□□□ -0.87
PTN-202ENST00000393083 MIFP14174 115 aa9.63□□□□□ -0.87
PTN-202ENST00000393083 LAGE3Q14657 143 aa9.63□□□□□ -0.87
PTN-202ENST00000393083 NEGR1Q7Z3B1 354 aa9.63□□□□□ -0.87
PTN-202ENST00000393083 LINC00518Q8N0U6 118 aa9.63□□□□□ -0.87
PTN-202ENST00000393083 DEFB4AO15263 64 aa9.62□□□□□ -0.87
PTN-202ENST00000393083 POLR2KP53803 58 aaKnown RBP9.62□□□□□ -0.87
PTN-202ENST00000393083 JOSD1Q15040 202 aaPredicted RBP9.62□□□□□ -0.87
PTN-202ENST00000393083 C3orf79P0CE67 100 aa9.61□□□□□ -0.87
PTN-202ENST00000393083 FCER1GP30273 86 aa9.61□□□□□ -0.87
PTN-202ENST00000393083 LINC00173Q6ZV60 143 aa9.61□□□□□ -0.87
PTN-202ENST00000393083 LINC00612Q8N6U2 182 aa9.61□□□□□ -0.87
PTN-202ENST00000393083 MUC7Q8TAX7 377 aa9.61□□□□□ -0.87
PTN-202ENST00000393083 C12orf57Q99622 126 aa9.61□□□□□ -0.87
PTN-202ENST00000393083 HSPB8Q9UJY1 196 aa9.61□□□□□ -0.87
PTN-202ENST00000393083 K7EMI3 77 aa9.6□□□□□ -0.87
PTN-202ENST00000393083 VCYO14598 125 aa9.6□□□□□ -0.87
PTN-202ENST00000393083 ORMDL2Q53FV1 153 aa9.6□□□□□ -0.87
PTN-202ENST00000393083 FAM222AQ5U5X8 452 aa9.6□□□□□ -0.87
PTN-202ENST00000393083 NEXN-AS1Q8NBZ9 246 aa9.6□□□□□ -0.87
PTN-202ENST00000393083 TRBV27A0A0K0K1C4 114 aa9.59□□□□□ -0.87
PTN-202ENST00000393083 LYRM9A8MSI8 78 aa9.59□□□□□ -0.87
PTN-202ENST00000393083 K7EQD1 137 aa9.59□□□□□ -0.87
PTN-202ENST00000393083 CIDEAO60543 219 aa9.59□□□□□ -0.87
PTN-202ENST00000393083 NUDT3O95989 172 aa9.59□□□□□ -0.87
PTN-202ENST00000393083 DEFB130BP0DP73 79 aa9.59□□□□□ -0.87
PTN-202ENST00000393083 DEFB130AP0DP74 79 aa9.59□□□□□ -0.87
PTN-202ENST00000393083 BTF3P20290 206 aaKnown RBP9.59□□□□□ -0.87
PTN-202ENST00000393083 DNAJC30Q96LL9 226 aa9.59□□□□□ -0.87
PTN-202ENST00000393083 KIR2DL4Q99706 377 aa9.59□□□□□ -0.87
PTN-202ENST00000393083 TNFRSF18Q9Y5U5 241 aa9.59□□□□□ -0.87
PTN-202ENST00000393083 SCGB1D1O95968 90 aa9.58□□□□□ -0.88
PTN-202ENST00000393083 CDPF1Q6NVV7 123 aa9.58□□□□□ -0.88
PTN-202ENST00000393083 TRGV4A0A0C4DH28 118 aa9.58□□□□□ -0.88
PTN-202ENST00000393083 C3orf84H3BNL1 204 aa9.58□□□□□ -0.88
PTN-202ENST00000393083 DEFB104AQ8WTQ1 72 aa9.58□□□□□ -0.88
PTN-202ENST00000393083 C18orf15Q96N68 181 aa9.58□□□□□ -0.88
PTN-202ENST00000393083 MAP1LC3CQ9BXW4 147 aa9.58□□□□□ -0.88
PTN-202ENST00000393083 DKK2Q9UBU2 259 aa9.58□□□□□ -0.88
PTN-202ENST00000393083 Q9UF83 564 aa9.58□□□□□ -0.88
PTN-202ENST00000393083 CSMD3Q7Z407 3707 aa9.57□□□□□ -0.88
PTN-202ENST00000393083 STARD9Q9P2P6 4700 aa9.57□□□□□ -0.88
PTN-202ENST00000393083 I3L3M4 83 aa9.57□□□□□ -0.88
PTN-202ENST00000393083 TRBV10-1A0A0K0K1A3 114 aa9.56□□□□□ -0.88
PTN-202ENST00000393083 SLC25A29Q8N8R3 303 aa9.56□□□□□ -0.88
PTN-202ENST00000393083 Q8N976 141 aa9.56□□□□□ -0.88
PTN-202ENST00000393083 C11orf45Q8TAV5 145 aa9.56□□□□□ -0.88
PTN-202ENST00000393083 CELA1Q9UNI1 258 aa9.56□□□□□ -0.88
PTN-202ENST00000393083 H0Y8G0 127 aa9.55□□□□□ -0.88
PTN-202ENST00000393083 SYS1-DBNDD2H3BUS1 97 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms