RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 SCGB3A1Q96QR1 104 aa13.27□□□□□ -0.29
ACTN4-202ENST00000390009 NACAE9PAV3 2078 aa13.26□□□□□ -0.29
ACTN4-202ENST00000390009 NSD1Q96L73 2696 aaPredicted RBP13.26□□□□□ -0.29
ACTN4-202ENST00000390009 MPV17L2Q567V2 206 aa13.25□□□□□ -0.29
ACTN4-202ENST00000390009 C11orf72Q8NBR9 251 aa13.25□□□□□ -0.29
ACTN4-202ENST00000390009 KIR2DL4Q99706 377 aa13.25□□□□□ -0.29
ACTN4-202ENST00000390009 NIPBLQ6KC79 2804 aaeCLIP13.25□□□□□ -0.292e-6■■■■□ 25.1
ACTN4-202ENST00000390009 TRBV27A0A0K0K1C4 114 aa13.25□□□□□ -0.29
ACTN4-202ENST00000390009 IGKCP01834 107 aa13.25□□□□□ -0.29
ACTN4-202ENST00000390009 CMC4P56277 68 aaPredicted RBP13.25□□□□□ -0.29
ACTN4-202ENST00000390009 TCTAP57738 103 aa13.24□□□□□ -0.29
ACTN4-202ENST00000390009 VAMP3Q15836 100 aa13.24□□□□□ -0.29
ACTN4-202ENST00000390009 PIK3CD-AS1Q5SR53 167 aa13.24□□□□□ -0.29
ACTN4-202ENST00000390009 ZFP2Q6ZN57 461 aa13.24□□□□□ -0.29
ACTN4-202ENST00000390009 A0A087WX48 190 aa13.24□□□□□ -0.29
ACTN4-202ENST00000390009 DPM2O94777 84 aa13.24□□□□□ -0.29
ACTN4-202ENST00000390009 DEFB104AQ8WTQ1 72 aa13.24□□□□□ -0.29
ACTN4-202ENST00000390009 MRPL35Q9NZE8 188 aaKnown RBP13.24□□□□□ -0.29
ACTN4-202ENST00000390009 HHLA3Q9XRX5 114 aa13.24□□□□□ -0.29
ACTN4-202ENST00000390009 A8MWV9 139 aa13.23□□□□□ -0.29
ACTN4-202ENST00000390009 C1orf158Q8N1D5 194 aa13.23□□□□□ -0.29
ACTN4-202ENST00000390009 PTH2Q96A98 100 aa13.23□□□□□ -0.29
ACTN4-202ENST00000390009 FN1P02751 2386 aaKnown RBP13.23□□□□□ -0.29
ACTN4-202ENST00000390009 C2CD3Q4AC94 2353 aa13.23□□□□□ -0.29
ACTN4-202ENST00000390009 IGHV3-73A0A0B4J1V6 119 aa13.22□□□□□ -0.29
ACTN4-202ENST00000390009 TRAV12-1A0A0B4J245 112 aa13.22□□□□□ -0.29
ACTN4-202ENST00000390009 COTL1Q14019 142 aa13.22□□□□□ -0.29
ACTN4-202ENST00000390009 BEAN1Q3B7T3 259 aa13.22□□□□□ -0.29
ACTN4-202ENST00000390009 ERASQ7Z444 233 aa13.22□□□□□ -0.29
ACTN4-202ENST00000390009 FAM110AQ9BQ89 295 aa13.22□□□□□ -0.29
ACTN4-202ENST00000390009 CYSLTR1Q9Y271 337 aa13.22□□□□□ -0.29
ACTN4-202ENST00000390009 TAX1BP3O14907 124 aa13.22□□□□□ -0.29
ACTN4-202ENST00000390009 PF4P02776 101 aa13.22□□□□□ -0.29
ACTN4-202ENST00000390009 FGF6P10767 208 aa13.22□□□□□ -0.29
ACTN4-202ENST00000390009 SPXQ9BT56 116 aa13.22□□□□□ -0.29
ACTN4-202ENST00000390009 WFDC10AQ9H1F0 79 aa13.22□□□□□ -0.29
ACTN4-202ENST00000390009 JMJD1CQ15652 2540 aa13.22□□□□□ -0.29
ACTN4-202ENST00000390009 IGHV3OR16-12A0A075B7B8 117 aa13.21□□□□□ -0.29
ACTN4-202ENST00000390009 BVES-AS1Q5T3Y7 98 aa13.21□□□□□ -0.29
ACTN4-202ENST00000390009 UFSP1Q6NVU6 142 aa13.21□□□□□ -0.29
ACTN4-202ENST00000390009 C19orf73Q9NVV2 129 aa13.21□□□□□ -0.29
ACTN4-202ENST00000390009 HIVEP1P15822 2718 aa13.21□□□□□ -0.29
ACTN4-202ENST00000390009 H7C1H1 209 aa13.21□□□□□ -0.3
ACTN4-202ENST00000390009 AZU1P20160 251 aa13.21□□□□□ -0.3
ACTN4-202ENST00000390009 NEXN-AS1Q8NBZ9 246 aa13.21□□□□□ -0.3
ACTN4-202ENST00000390009 EDA2RQ9HAV5 297 aa13.21□□□□□ -0.3
ACTN4-202ENST00000390009 TP53TG1Q9Y2A0 90 aa13.21□□□□□ -0.3
ACTN4-202ENST00000390009 BAALCQ8WXS3 180 aa13.2□□□□□ -0.3
ACTN4-202ENST00000390009 LINC01549A6NIU2 74 aa13.19□□□□□ -0.3
ACTN4-202ENST00000390009 NMUP48645 174 aa13.19□□□□□ -0.3
ACTN4-202ENST00000390009 RIPPLY3P57055 190 aa13.19□□□□□ -0.3
ACTN4-202ENST00000390009 RNF151Q2KHN1 245 aa13.19□□□□□ -0.3
ACTN4-202ENST00000390009 CFAP126Q5VTH2 177 aa13.19□□□□□ -0.3
ACTN4-202ENST00000390009 BOD1L2Q8IYS8 172 aa13.19□□□□□ -0.3
ACTN4-202ENST00000390009 LINC00482Q8N8I6 264 aa13.19□□□□□ -0.3
ACTN4-202ENST00000390009 MRPL16Q9NX20 251 aaKnown RBP13.19□□□□□ -0.3
ACTN4-202ENST00000390009 F8VRH5 84 aa13.19□□□□□ -0.3
ACTN4-202ENST00000390009 ZC2HC1BQ5TFG8 222 aa13.19□□□□□ -0.3
ACTN4-202ENST00000390009 C2orf91Q6ZV80 131 aa13.19□□□□□ -0.3
ACTN4-202ENST00000390009 PLNP26678 52 aa13.18□□□□□ -0.3
ACTN4-202ENST00000390009 RPL39P62891 51 aaKnown RBP13.18□□□□□ -0.3
ACTN4-202ENST00000390009 C12orf54Q6X4T0 127 aa13.18□□□□□ -0.3
ACTN4-202ENST00000390009 CHTOPQ9Y3Y2 248 aaKnown RBP13.18□□□□□ -0.3
ACTN4-202ENST00000390009 IGIPA6NJ69 53 aa13.17□□□□□ -0.3
ACTN4-202ENST00000390009 CRLF1O75462 422 aa13.17□□□□□ -0.3
ACTN4-202ENST00000390009 GIG44P09565 113 aaPredicted RBP13.17□□□□□ -0.3
ACTN4-202ENST00000390009 P0DMU3 169 aa13.17□□□□□ -0.3
ACTN4-202ENST00000390009 FAM231AP0DMU4 169 aa13.17□□□□□ -0.3
ACTN4-202ENST00000390009 FAM231CP0DMU5 169 aa13.17□□□□□ -0.3
ACTN4-202ENST00000390009 GTSCR1Q86UQ5 136 aa13.17□□□□□ -0.3
ACTN4-202ENST00000390009 PCP2Q8IVA1 136 aa13.17□□□□□ -0.3
ACTN4-202ENST00000390009 IGKV2D-26A0A0A0MRZ7 120 aa13.16□□□□□ -0.3
ACTN4-202ENST00000390009 I3L3M4 83 aa13.16□□□□□ -0.3
ACTN4-202ENST00000390009 TSHBP01222 138 aa13.16□□□□□ -0.3
ACTN4-202ENST00000390009 RHOHQ15669 191 aa13.16□□□□□ -0.3
ACTN4-202ENST00000390009 RHODO00212 210 aa13.16□□□□□ -0.3
ACTN4-202ENST00000390009 RPL35AP18077 110 aaKnown RBP13.16□□□□□ -0.3
ACTN4-202ENST00000390009 IL17DQ8TAD2 202 aa13.16□□□□□ -0.3
ACTN4-202ENST00000390009 CST9LQ9H4G1 147 aa13.16□□□□□ -0.3
ACTN4-202ENST00000390009 PRSS29PA6NIE9 313 aa13.15□□□□□ -0.3
ACTN4-202ENST00000390009 Q6ZSN1 163 aa13.15□□□□□ -0.3
ACTN4-202ENST00000390009 NOTCH3Q9UM47 2321 aa13.15□□□□□ -0.3
ACTN4-202ENST00000390009 TIMM17AQ99595 171 aa13.15□□□□□ -0.3
ACTN4-202ENST00000390009 RS1O15537 224 aa13.14□□□□□ -0.31
ACTN4-202ENST00000390009 OCIAD2Q56VL3 154 aa13.14□□□□□ -0.31
ACTN4-202ENST00000390009 TMEM263Q8WUH6 116 aaKnown RBP13.14□□□□□ -0.31
ACTN4-202ENST00000390009 TMEM141Q96I45 108 aa13.14□□□□□ -0.31
ACTN4-202ENST00000390009 AMMECR1LQ6DCA0 310 aa13.13□□□□□ -0.31
ACTN4-202ENST00000390009 TNFRSF18Q9Y5U5 241 aa13.13□□□□□ -0.31
ACTN4-202ENST00000390009 Q9UF83 564 aa13.13□□□□□ -0.31
ACTN4-202ENST00000390009 TRGV1A0A0A0MS02 117 aa13.12□□□□□ -0.31
ACTN4-202ENST00000390009 IGHV3-53P01767 116 aa13.12□□□□□ -0.31
ACTN4-202ENST00000390009 SIVA1O15304 175 aa13.12□□□□□ -0.31
ACTN4-202ENST00000390009 C20orf203Q8NBC4 194 aa13.12□□□□□ -0.31
ACTN4-202ENST00000390009 C1QTNF4Q9BXJ3 329 aa13.12□□□□□ -0.31
ACTN4-202ENST00000390009 TTTY13Q9BZ97 58 aa13.12□□□□□ -0.31
ACTN4-202ENST00000390009 PMVKQ15126 192 aa13.11□□□□□ -0.31
ACTN4-202ENST00000390009 VPS25Q9BRG1 176 aa13.11□□□□□ -0.31
ACTN4-202ENST00000390009 CSNK1G2-AS1Q8NCQ2 148 aa13.1□□□□□ -0.31
ACTN4-202ENST00000390009 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms