RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 NEXN-AS1Q8NBZ9 246 aa6.01□□□□□ -1.45
IFT88-203ENST00000389373 PRSS3P2Q8NHM4 247 aa6.01□□□□□ -1.45
IFT88-203ENST00000389373 SMIM3Q9BZL3 60 aa6.01□□□□□ -1.45
IFT88-203ENST00000389373 PRR34Q9NV39 138 aa6.01□□□□□ -1.45
IFT88-203ENST00000389373 TMSB15BA0A087X1C1 80 aa6□□□□□ -1.45
IFT88-203ENST00000389373 REG3AQ06141 175 aa6□□□□□ -1.45
IFT88-203ENST00000389373 ZNF56Q15929 161 aa6□□□□□ -1.45
IFT88-203ENST00000389373 WFDC1Q9HC57 220 aa6□□□□□ -1.45
IFT88-203ENST00000389373 EPDR1Q9UM22 224 aa6□□□□□ -1.45
IFT88-203ENST00000389373 BORCS7-ASMTA0A0B4J1R7 106 aa5.99□□□□□ -1.45
IFT88-203ENST00000389373 NDUFS6O75380 124 aaKnown RBP5.99□□□□□ -1.45
IFT88-203ENST00000389373 IFNA7P01567 189 aa5.99□□□□□ -1.45
IFT88-203ENST00000389373 ARL14EPLP0DKL9 152 aa5.99□□□□□ -1.45
IFT88-203ENST00000389373 RAB2AP61019 212 aa5.99□□□□□ -1.45
IFT88-203ENST00000389373 SRSF9Q13242 221 aaKnown RBP eCLIP5.99□□□□□ -1.45
IFT88-203ENST00000389373 NTM-AS1Q6ZSK4 140 aa5.99□□□□□ -1.45
IFT88-203ENST00000389373 DERL1Q9BUN8 251 aa5.99□□□□□ -1.45
IFT88-203ENST00000389373 LPAP08519 4548 aa5.99□□□□□ -1.45
IFT88-203ENST00000389373 FAM231BA6NCW3 169 aa5.98□□□□□ -1.45
IFT88-203ENST00000389373 KRBOX1C9JBD0 128 aa5.98□□□□□ -1.45
IFT88-203ENST00000389373 MBP02144 154 aa5.98□□□□□ -1.45
IFT88-203ENST00000389373 RPS10P46783 165 aaKnown RBP5.98□□□□□ -1.45
IFT88-203ENST00000389373 HIGD2BQ4VC39 106 aa5.98□□□□□ -1.45
IFT88-203ENST00000389373 ZFP82Q8N141 532 aa5.98□□□□□ -1.45
IFT88-203ENST00000389373 OR10G8Q8NGN5 311 aa5.98□□□□□ -1.45
IFT88-203ENST00000389373 VAX2Q9UIW0 290 aa5.98□□□□□ -1.45
IFT88-203ENST00000389373 TNFSF18Q9UNG2 199 aa5.98□□□□□ -1.45
IFT88-203ENST00000389373 ARL2-SNX15V9GYD0 113 aa5.98□□□□□ -1.45
IFT88-203ENST00000389373 TRBV25-1A0A075B6N4 114 aa5.97□□□□□ -1.45
IFT88-203ENST00000389373 TRAV8-4A0A0B4J246 113 aa5.97□□□□□ -1.45
IFT88-203ENST00000389373 F5H697 171 aa5.97□□□□□ -1.45
IFT88-203ENST00000389373 ARPC5O15511 151 aa5.97□□□□□ -1.45
IFT88-203ENST00000389373 P01737 135 aa5.97□□□□□ -1.45
IFT88-203ENST00000389373 STAG3L2P0CL84 134 aa5.97□□□□□ -1.45
IFT88-203ENST00000389373 STAG3L3P0CL85 134 aa5.97□□□□□ -1.45
IFT88-203ENST00000389373 RAB4BP61018 213 aa5.97□□□□□ -1.45
IFT88-203ENST00000389373 SERF2P84101 59 aa5.97□□□□□ -1.45
IFT88-203ENST00000389373 TMEM97Q5BJF2 176 aa5.97□□□□□ -1.45
IFT88-203ENST00000389373 Q6ZRP5 223 aa5.97□□□□□ -1.45
IFT88-203ENST00000389373 SUN5Q8TC36 379 aa5.97□□□□□ -1.45
IFT88-203ENST00000389373 PSMG3Q9BT73 122 aaPredicted RBP5.97□□□□□ -1.45
IFT88-203ENST00000389373 TRAV26-2A0A0B4J265 109 aa5.96□□□□□ -1.46
IFT88-203ENST00000389373 TRBV6-1A0A0K0K1D8 114 aa5.96□□□□□ -1.46
IFT88-203ENST00000389373 SH2D1AO60880 128 aa5.96□□□□□ -1.46
IFT88-203ENST00000389373 GCHFRP30047 84 aa5.96□□□□□ -1.46
IFT88-203ENST00000389373 CDC34P49427 236 aaPredicted RBP5.96□□□□□ -1.46
IFT88-203ENST00000389373 CRIP1P50238 77 aa5.96□□□□□ -1.46
IFT88-203ENST00000389373 SSTP61278 116 aa5.96□□□□□ -1.46
IFT88-203ENST00000389373 PRR4Q16378 134 aa5.96□□□□□ -1.46
IFT88-203ENST00000389373 Q5BKY6 102 aa5.96□□□□□ -1.46
IFT88-203ENST00000389373 DNLZQ5SXM8 178 aa5.96□□□□□ -1.46
IFT88-203ENST00000389373 CFAP161Q6P656 301 aa5.96□□□□□ -1.46
IFT88-203ENST00000389373 IGLV4-60A0A075B6I1 120 aa5.95□□□□□ -1.46
IFT88-203ENST00000389373 A0A096LNI7 61 aa5.95□□□□□ -1.46
IFT88-203ENST00000389373 IGHV1-24A0A0C4DH33 117 aa5.95□□□□□ -1.46
IFT88-203ENST00000389373 GAGE12HA6NDE8 117 aa5.95□□□□□ -1.46
IFT88-203ENST00000389373 GZMBP10144 247 aa5.95□□□□□ -1.46
IFT88-203ENST00000389373 ATP6V0CP27449 155 aa5.95□□□□□ -1.46
IFT88-203ENST00000389373 SULT1A2P50226 295 aa5.95□□□□□ -1.46
IFT88-203ENST00000389373 EIF5AP63241 154 aaKnown RBP5.95□□□□□ -1.46
IFT88-203ENST00000389373 ZNF345Q14585 488 aa5.95□□□□□ -1.46
IFT88-203ENST00000389373 C20orf203Q8NBC4 194 aa5.95□□□□□ -1.46
IFT88-203ENST00000389373 RAB24Q969Q5 203 aa5.95□□□□□ -1.46
IFT88-203ENST00000389373 IGKV3OR2-268A0A0C4DH90 116 aa5.94□□□□□ -1.46
IFT88-203ENST00000389373 MUC21A0A140T8X8 626 aa5.94□□□□□ -1.46
IFT88-203ENST00000389373 HMSDA8MTL9 139 aa5.94□□□□□ -1.46
IFT88-203ENST00000389373 AKR1C8PQ5T2L2 129 aa5.94□□□□□ -1.46
IFT88-203ENST00000389373 RPL7L1Q6DKI1 246 aaKnown RBP5.94□□□□□ -1.46
IFT88-203ENST00000389373 PRR27Q6MZM9 219 aa5.94□□□□□ -1.46
IFT88-203ENST00000389373 C15orf56Q8N910 161 aa5.94□□□□□ -1.46
IFT88-203ENST00000389373 ACTR3CQ9C0K3 210 aaPredicted RBP5.94□□□□□ -1.46
IFT88-203ENST00000389373 GFRA4Q9GZZ7 299 aa5.94□□□□□ -1.46
IFT88-203ENST00000389373 KANTRA0A1W2PQU2 76 aa5.93□□□□□ -1.46
IFT88-203ENST00000389373 G3V3Q6 166 aa5.93□□□□□ -1.46
IFT88-203ENST00000389373 PFDN1O60925 122 aa5.93□□□□□ -1.46
IFT88-203ENST00000389373 CACNG7P62955 275 aa5.93□□□□□ -1.46
IFT88-203ENST00000389373 IQCJQ1A5X6 159 aa5.93□□□□□ -1.46
IFT88-203ENST00000389373 FAM162BQ5T6X4 162 aa5.93□□□□□ -1.46
IFT88-203ENST00000389373 Q86TA4 180 aa5.93□□□□□ -1.46
IFT88-203ENST00000389373 ZNF664Q8N3J9 261 aa5.93□□□□□ -1.46
IFT88-203ENST00000389373 KCNRGQ8N5I3 272 aa5.93□□□□□ -1.46
IFT88-203ENST00000389373 PRR26Q8N8Z3 221 aa5.93□□□□□ -1.46
IFT88-203ENST00000389373 PSORS1C2Q9UIG4 136 aa5.93□□□□□ -1.46
IFT88-203ENST00000389373 SMLR1H3BR10 107 aa5.92□□□□□ -1.46
IFT88-203ENST00000389373 CXorf1O96002 111 aa5.92□□□□□ -1.46
IFT88-203ENST00000389373 UBE2G2P60604 165 aa5.92□□□□□ -1.46
IFT88-203ENST00000389373 OR10AG1Q8NH19 301 aa5.92□□□□□ -1.46
IFT88-203ENST00000389373 ZNF471Q9BX82 626 aaPredicted RBP5.92□□□□□ -1.46
IFT88-203ENST00000389373 TMEM167BQ9NRX6 74 aa5.92□□□□□ -1.46
IFT88-203ENST00000389373 LINC00474Q9P2X8 69 aa5.92□□□□□ -1.46
IFT88-203ENST00000389373 CTXND1A0A1B0GTU2 59 aa5.91□□□□□ -1.46
IFT88-203ENST00000389373 A0A1W2PRE2 83 aa5.91□□□□□ -1.46
IFT88-203ENST00000389373 UMAD1C9J7I0 102 aa5.91□□□□□ -1.46
IFT88-203ENST00000389373 PEX7O00628 323 aa5.91□□□□□ -1.46
IFT88-203ENST00000389373 BCL2L11O43521 198 aa5.91□□□□□ -1.46
IFT88-203ENST00000389373 SMIM17P0DL12 118 aa5.91□□□□□ -1.46
IFT88-203ENST00000389373 LINC01559Q495D7 138 aa5.91□□□□□ -1.46
IFT88-203ENST00000389373 SPANXN1Q5VSR9 72 aa5.91□□□□□ -1.46
IFT88-203ENST00000389373 EIF5AL1Q6IS14 154 aaKnown RBP5.91□□□□□ -1.46
IFT88-203ENST00000389373 AKAP14Q86UN6 197 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms