RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 IGHV3OR16-13A0A075B7E8 117 aa6.69□□□□□ -1.34
GPNMB-202ENST00000381990 IGHV3-74A0A0B4J1X5 117 aa6.69□□□□□ -1.34
GPNMB-202ENST00000381990 TMEM89A2RUT3 159 aa6.69□□□□□ -1.34
GPNMB-202ENST00000381990 IGIPA6NJ69 53 aa6.69□□□□□ -1.34
GPNMB-202ENST00000381990 MGPP08493 103 aa6.69□□□□□ -1.34
GPNMB-202ENST00000381990 CFC1BP0CG36 223 aa6.69□□□□□ -1.34
GPNMB-202ENST00000381990 CFC1P0CG37 223 aa6.69□□□□□ -1.34
GPNMB-202ENST00000381990 HIST2H2BCQ6DN03 193 aa6.69□□□□□ -1.34
GPNMB-202ENST00000381990 GPHB5Q86YW7 130 aa6.69□□□□□ -1.34
GPNMB-202ENST00000381990 TEX15Q9BXT5 2789 aa6.69□□□□□ -1.34
GPNMB-202ENST00000381990 IGHV3-49A0A0A0MS15 119 aa6.69□□□□□ -1.34
GPNMB-202ENST00000381990 PSMB8P28062 276 aa6.69□□□□□ -1.34
GPNMB-202ENST00000381990 ZFAND6Q6FIF0 208 aa6.69□□□□□ -1.34
GPNMB-202ENST00000381990 Q6ZQT7 251 aa6.69□□□□□ -1.34
GPNMB-202ENST00000381990 KLHL30-AS1Q8NEE0 82 aa6.69□□□□□ -1.34
GPNMB-202ENST00000381990 KIR2DL4Q99706 377 aa6.69□□□□□ -1.34
GPNMB-202ENST00000381990 ITPR3Q14573 2671 aa6.69□□□□□ -1.34
GPNMB-202ENST00000381990 DUSP14O95147 198 aaKnown RBP6.69□□□□□ -1.34
GPNMB-202ENST00000381990 UNQ9165/PRO28630Q6UXU0 137 aa6.69□□□□□ -1.34
GPNMB-202ENST00000381990 WFDC11Q8NEX6 87 aa6.69□□□□□ -1.34
GPNMB-202ENST00000381990 FAM19A4Q96LR4 140 aa6.69□□□□□ -1.34
GPNMB-202ENST00000381990 TP53TG1Q9Y2A0 90 aa6.69□□□□□ -1.34
GPNMB-202ENST00000381990 VCYO14598 125 aa6.68□□□□□ -1.34
GPNMB-202ENST00000381990 SCGB1C2P0DMR2 95 aa6.68□□□□□ -1.34
GPNMB-202ENST00000381990 ANKRD29Q8N6D5 301 aa6.68□□□□□ -1.34
GPNMB-202ENST00000381990 TEX29Q8N6K0 151 aa6.68□□□□□ -1.34
GPNMB-202ENST00000381990 PTH2Q96A98 100 aa6.68□□□□□ -1.34
GPNMB-202ENST00000381990 CCDC168Q8NDH2 2452 aa6.68□□□□□ -1.34
GPNMB-202ENST00000381990 TSHBP01222 138 aa6.68□□□□□ -1.34
GPNMB-202ENST00000381990 POLR2KP53803 58 aaKnown RBP6.68□□□□□ -1.34
GPNMB-202ENST00000381990 ANXA2RQ3ZCQ2 193 aa6.68□□□□□ -1.34
GPNMB-202ENST00000381990 ZNF876PQ49A33 203 aa6.68□□□□□ -1.34
GPNMB-202ENST00000381990 ANAPC13Q9BS18 74 aa6.68□□□□□ -1.34
GPNMB-202ENST00000381990 P0DMU3 169 aa6.67□□□□□ -1.34
GPNMB-202ENST00000381990 FAM231AP0DMU4 169 aa6.67□□□□□ -1.34
GPNMB-202ENST00000381990 FAM231CP0DMU5 169 aa6.67□□□□□ -1.34
GPNMB-202ENST00000381990 SRD5A1P18405 259 aa6.67□□□□□ -1.34
GPNMB-202ENST00000381990 SFTA2Q6UW10 78 aa6.67□□□□□ -1.34
GPNMB-202ENST00000381990 C20orf173Q96LM9 149 aa6.67□□□□□ -1.34
GPNMB-202ENST00000381990 LINC01600Q96MT4 127 aa6.67□□□□□ -1.34
GPNMB-202ENST00000381990 ZNF702PQ9H963 129 aa6.67□□□□□ -1.34
GPNMB-202ENST00000381990 MXRA5Q9NR99 2828 aa6.67□□□□□ -1.34
GPNMB-202ENST00000381990 TLN2Q9Y4G6 2542 aa6.67□□□□□ -1.34
GPNMB-202ENST00000381990 A0A0B4J2C4 111 aa6.67□□□□□ -1.34
GPNMB-202ENST00000381990 J3QQQ9 107 aa6.67□□□□□ -1.34
GPNMB-202ENST00000381990 SOCS3O14543 225 aa6.67□□□□□ -1.34
GPNMB-202ENST00000381990 SLC25A20O43772 301 aa6.67□□□□□ -1.34
GPNMB-202ENST00000381990 RNASE3P12724 160 aaKnown RBP6.67□□□□□ -1.34
GPNMB-202ENST00000381990 KIF25-AS1Q9Y6Z4 181 aa6.67□□□□□ -1.34
GPNMB-202ENST00000381990 LGALS3P17931 250 aaKnown RBP6.66□□□□□ -1.34
GPNMB-202ENST00000381990 TMEM170BQ5T4T1 132 aa6.66□□□□□ -1.34
GPNMB-202ENST00000381990 WFDC12Q8WWY7 111 aa6.66□□□□□ -1.34
GPNMB-202ENST00000381990 AMELXQ99217 191 aa6.66□□□□□ -1.34
GPNMB-202ENST00000381990 CITED1Q99966 193 aa6.66□□□□□ -1.34
GPNMB-202ENST00000381990 TRBV27A0A0K0K1C4 114 aa6.66□□□□□ -1.34
GPNMB-202ENST00000381990 ELANEP08246 267 aa6.66□□□□□ -1.34
GPNMB-202ENST00000381990 C10orf99Q6UWK7 81 aa6.66□□□□□ -1.34
GPNMB-202ENST00000381990 RNF183Q96D59 192 aa6.66□□□□□ -1.34
GPNMB-202ENST00000381990 DAZ1Q9NQZ3 744 aaKnown RBP6.66□□□□□ -1.34
GPNMB-202ENST00000381990 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.65□□□□□ -1.34
GPNMB-202ENST00000381990 TRBV6-5A0A0K0K1A5 114 aa6.65□□□□□ -1.34
GPNMB-202ENST00000381990 K7EMT4 169 aa6.65□□□□□ -1.34
GPNMB-202ENST00000381990 LINC00315P59091 139 aa6.65□□□□□ -1.34
GPNMB-202ENST00000381990 GAGE5Q13069 117 aa6.65□□□□□ -1.34
GPNMB-202ENST00000381990 GAGE6Q13070 117 aa6.65□□□□□ -1.34
GPNMB-202ENST00000381990 J3KRW8 73 aa6.65□□□□□ -1.35
GPNMB-202ENST00000381990 RNASE4P34096 147 aaKnown RBP6.65□□□□□ -1.35
GPNMB-202ENST00000381990 TSPEAR-AS2P59090 65 aa6.65□□□□□ -1.35
GPNMB-202ENST00000381990 SPANXA1Q9NS26 97 aa6.65□□□□□ -1.35
GPNMB-202ENST00000381990 FLNAP21333 2647 aaKnown RBP6.65□□□□□ -1.35
GPNMB-202ENST00000381990 A0A0J9YX75 114 aa6.64□□□□□ -1.35
GPNMB-202ENST00000381990 RHODO00212 210 aa6.64□□□□□ -1.35
GPNMB-202ENST00000381990 LEPROTO15243 131 aa6.64□□□□□ -1.35
GPNMB-202ENST00000381990 IGHV3-33P01772 117 aa6.64□□□□□ -1.35
GPNMB-202ENST00000381990 Q8N2B8 174 aa6.64□□□□□ -1.35
GPNMB-202ENST00000381990 TMEM86BQ8N661 226 aa6.64□□□□□ -1.35
GPNMB-202ENST00000381990 ZNRF2Q8NHG8 242 aa6.64□□□□□ -1.35
GPNMB-202ENST00000381990 RHPN1-AS1Q9BWJ2 59 aa6.64□□□□□ -1.35
GPNMB-202ENST00000381990 SNCGO76070 127 aa6.64□□□□□ -1.35
GPNMB-202ENST00000381990 RHOHQ15669 191 aa6.64□□□□□ -1.35
GPNMB-202ENST00000381990 ATXN8Q156A1 80 aa6.64□□□□□ -1.35
GPNMB-202ENST00000381990 Q6Q795 121 aa6.64□□□□□ -1.35
GPNMB-202ENST00000381990 RNF152Q8N8N0 203 aa6.64□□□□□ -1.35
GPNMB-202ENST00000381990 TMEM263Q8WUH6 116 aaKnown RBP6.64□□□□□ -1.35
GPNMB-202ENST00000381990 ZFHX3Q15911 3703 aa6.64□□□□□ -1.35
GPNMB-202ENST00000381990 A4D1N5 150 aa6.63□□□□□ -1.35
GPNMB-202ENST00000381990 SDHAF1A6NFY7 115 aa6.63□□□□□ -1.35
GPNMB-202ENST00000381990 C9JAW5 83 aa6.63□□□□□ -1.35
GPNMB-202ENST00000381990 LGALS9O00182 355 aa6.63□□□□□ -1.35
GPNMB-202ENST00000381990 GNRH2O43555 120 aa6.63□□□□□ -1.35
GPNMB-202ENST00000381990 RPL13AP40429 203 aaKnown RBP6.63□□□□□ -1.35
GPNMB-202ENST00000381990 EMP1P54849 157 aa6.63□□□□□ -1.35
GPNMB-202ENST00000381990 GAGE2BQ13066 116 aa6.63□□□□□ -1.35
GPNMB-202ENST00000381990 NSUN5P1Q3KNT7 163 aa6.63□□□□□ -1.35
GPNMB-202ENST00000381990 GAGE2EQ4V326 116 aa6.63□□□□□ -1.35
GPNMB-202ENST00000381990 SUMO4Q6EEV6 95 aa6.63□□□□□ -1.35
GPNMB-202ENST00000381990 GAGE2DQ9UEU5 116 aa6.63□□□□□ -1.35
GPNMB-202ENST00000381990 PDZD2O15018 2839 aa6.63□□□□□ -1.35
GPNMB-202ENST00000381990 UNC79Q9P2D8 2635 aa6.63□□□□□ -1.35
GPNMB-202ENST00000381990 KLLNB2CW77 178 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms