RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 BVES-AS1Q5T3Y7 98 aa16.93■□□□□ 0.3
VPS16-201ENST00000380443 C11orf44Q8N8P7 122 aa16.93■□□□□ 0.3
VPS16-201ENST00000380443 NEXN-AS1Q8NBZ9 246 aa16.93■□□□□ 0.3
VPS16-201ENST00000380443 OR11H12B2RN74 326 aa16.93■□□□□ 0.3
VPS16-201ENST00000380443 ODF3L2Q3SX64 289 aa16.93■□□□□ 0.3
VPS16-201ENST00000380443 ZFP2Q6ZN57 461 aa16.93■□□□□ 0.3
VPS16-201ENST00000380443 GAGE1Q13065 139 aa16.92■□□□□ 0.3
VPS16-201ENST00000380443 RHOHQ15669 191 aa16.92■□□□□ 0.3
VPS16-201ENST00000380443 ZNF124Q15973 351 aa16.92■□□□□ 0.3
VPS16-201ENST00000380443 TMEM141Q96I45 108 aa16.92■□□□□ 0.3
VPS16-201ENST00000380443 FAM110AQ9BQ89 295 aa16.92■□□□□ 0.3
VPS16-201ENST00000380443 STHQ8IWL8 128 aa16.91■□□□□ 0.3
VPS16-201ENST00000380443 LINC01587Q99440 93 aa16.91■□□□□ 0.3
VPS16-201ENST00000380443 CHTOPQ9Y3Y2 248 aaKnown RBP16.91■□□□□ 0.3
VPS16-201ENST00000380443 ZNF25P17030 456 aaPredicted RBP16.91■□□□□ 0.3
VPS16-201ENST00000380443 NMUP48645 174 aa16.91■□□□□ 0.3
VPS16-201ENST00000380443 ZC2HC1BQ5TFG8 222 aa16.9■□□□□ 0.3
VPS16-201ENST00000380443 TIMM17AQ99595 171 aa16.9■□□□□ 0.3
VPS16-201ENST00000380443 SORL1Q92673 2214 aa16.9■□□□□ 0.3
VPS16-201ENST00000380443 PROK1P58294 105 aa16.89■□□□□ 0.29
VPS16-201ENST00000380443 BAALCQ8WXS3 180 aa16.89■□□□□ 0.29
VPS16-201ENST00000380443 TP73-AS1Q9UF72 201 aa16.89■□□□□ 0.29
VPS16-201ENST00000380443 ORAOV1Q8WV07 137 aa16.89■□□□□ 0.29
VPS16-201ENST00000380443 HIGD1BQ9P298 99 aa16.89■□□□□ 0.29
VPS16-201ENST00000380443 SEC11AP67812 179 aa16.88■□□□□ 0.29
VPS16-201ENST00000380443 NSUN5P1Q3KNT7 163 aa16.88■□□□□ 0.29
VPS16-201ENST00000380443 TMEM97Q5BJF2 176 aa16.88■□□□□ 0.29
VPS16-201ENST00000380443 PAPPA-AS1Q5QFB9 102 aa16.88■□□□□ 0.29
VPS16-201ENST00000380443 MORN3Q6PF18 240 aaPredicted RBP16.88■□□□□ 0.29
VPS16-201ENST00000380443 RHODO00212 210 aa16.87■□□□□ 0.29
VPS16-201ENST00000380443 HSD52Q0P140 79 aa16.87■□□□□ 0.29
VPS16-201ENST00000380443 HIST2H2BDQ6DRA6 164 aa16.87■□□□□ 0.29
VPS16-201ENST00000380443 TMEM208Q9BTX3 173 aa16.87■□□□□ 0.29
VPS16-201ENST00000380443 IGIPA6NJ69 53 aa16.86■□□□□ 0.29
VPS16-201ENST00000380443 I3L3M4 83 aa16.86■□□□□ 0.29
VPS16-201ENST00000380443 HTN1P15515 57 aa16.86■□□□□ 0.29
VPS16-201ENST00000380443 BEAN1Q3B7T3 259 aa16.86■□□□□ 0.29
VPS16-201ENST00000380443 TP53TG1Q9Y2A0 90 aa16.86■□□□□ 0.29
VPS16-201ENST00000380443 C2CD3Q4AC94 2353 aa16.86■□□□□ 0.29
VPS16-201ENST00000380443 NEGR1Q7Z3B1 354 aa16.86■□□□□ 0.29
VPS16-201ENST00000380443 C11orf72Q8NBR9 251 aa16.86■□□□□ 0.29
VPS16-201ENST00000380443 IGLV1-51P01701 117 aa16.85■□□□□ 0.29
VPS16-201ENST00000380443 UFSP1Q6NVU6 142 aa16.85■□□□□ 0.29
VPS16-201ENST00000380443 GTSCR1Q86UQ5 136 aa16.85■□□□□ 0.29
VPS16-201ENST00000380443 PCP2Q8IVA1 136 aa16.85■□□□□ 0.29
VPS16-201ENST00000380443 COX11Q9Y6N1 276 aa16.85■□□□□ 0.29
VPS16-201ENST00000380443 PRSS29PA6NIE9 313 aa16.84■□□□□ 0.29
VPS16-201ENST00000380443 SAP30O75446 220 aa16.84■□□□□ 0.29
VPS16-201ENST00000380443 PRIMA1Q86XR5 153 aa16.84■□□□□ 0.29
VPS16-201ENST00000380443 CUBNO60494 3623 aa16.84■□□□□ 0.29
VPS16-201ENST00000380443 ADARB2-AS1A8MUL3 147 aa16.84■□□□□ 0.29
VPS16-201ENST00000380443 NDUFA11Q86Y39 141 aa16.83■□□□□ 0.28
VPS16-201ENST00000380443 IGKV2D-26A0A0A0MRZ7 120 aa16.82■□□□□ 0.28
VPS16-201ENST00000380443 PMVKQ15126 192 aa16.82■□□□□ 0.28
VPS16-201ENST00000380443 DNAJC30Q96LL9 226 aa16.81■□□□□ 0.28
VPS16-201ENST00000380443 RS1O15537 224 aa16.8■□□□□ 0.28
VPS16-201ENST00000380443 TSHBP01222 138 aa16.8■□□□□ 0.28
VPS16-201ENST00000380443 CFAP126Q5VTH2 177 aa16.8■□□□□ 0.28
VPS16-201ENST00000380443 XCL2Q9UBD3 114 aa16.8■□□□□ 0.28
VPS16-201ENST00000380443 A6NDN8 102 aa16.8■□□□□ 0.28
VPS16-201ENST00000380443 JMJD1CQ15652 2540 aa16.79■□□□□ 0.28
VPS16-201ENST00000380443 C1orf158Q8N1D5 194 aa16.79■□□□□ 0.28
VPS16-201ENST00000380443 TNFRSF18Q9Y5U5 241 aa16.79■□□□□ 0.28
VPS16-201ENST00000380443 TCTAP57738 103 aa16.78■□□□□ 0.28
VPS16-201ENST00000380443 KRTAP21-3Q3LHN1 58 aa16.78■□□□□ 0.28
VPS16-201ENST00000380443 C20orf203Q8NBC4 194 aa16.78■□□□□ 0.28
VPS16-201ENST00000380443 CST9LQ9H4G1 147 aa16.77■□□□□ 0.28
VPS16-201ENST00000380443 TAX1BP3O14907 124 aa16.77■□□□□ 0.27
VPS16-201ENST00000380443 IGHV3-53P01767 116 aa16.77■□□□□ 0.27
VPS16-201ENST00000380443 NPSP0C0P6 89 aa16.77■□□□□ 0.27
VPS16-201ENST00000380443 IL17DQ8TAD2 202 aa16.77■□□□□ 0.27
VPS16-201ENST00000380443 E9PLD3 99 aa16.76■□□□□ 0.27
VPS16-201ENST00000380443 RPL39P62891 51 aaKnown RBP16.76■□□□□ 0.27
VPS16-201ENST00000380443 OR11H2Q8NH07 326 aa16.76■□□□□ 0.27
VPS16-201ENST00000380443 C1QTNF4Q9BXJ3 329 aa16.76■□□□□ 0.27
VPS16-201ENST00000380443 TRBV25-1A0A075B6N4 114 aa16.75■□□□□ 0.27
VPS16-201ENST00000380443 P0DMU3 169 aa16.75■□□□□ 0.27
VPS16-201ENST00000380443 FAM231AP0DMU4 169 aa16.75■□□□□ 0.27
VPS16-201ENST00000380443 FAM231CP0DMU5 169 aa16.75■□□□□ 0.27
VPS16-201ENST00000380443 CRYBA4P53673 196 aa16.75■□□□□ 0.27
VPS16-201ENST00000380443 TAL2Q16559 108 aa16.75■□□□□ 0.27
VPS16-201ENST00000380443 PYGO1Q9Y3Y4 419 aa16.75■□□□□ 0.27
VPS16-201ENST00000380443 HERVK_113P61574 105 aa16.74■□□□□ 0.27
VPS16-201ENST00000380443 TMEM263Q8WUH6 116 aaKnown RBP16.74■□□□□ 0.27
VPS16-201ENST00000380443 PRM2P04554 102 aa16.73■□□□□ 0.27
VPS16-201ENST00000380443 CHAC1Q9BUX1 264 aa16.73■□□□□ 0.27
VPS16-201ENST00000380443 RNASE8Q8TDE3 154 aaKnown RBP16.73■□□□□ 0.27
VPS16-201ENST00000380443 C19orf73Q9NVV2 129 aa16.73■□□□□ 0.27
VPS16-201ENST00000380443 MRPL16Q9NX20 251 aaKnown RBP16.73■□□□□ 0.27
VPS16-201ENST00000380443 IGLV4-69A0A075B6H9 119 aa16.72■□□□□ 0.27
VPS16-201ENST00000380443 IGHV3-73A0A0B4J1V6 119 aa16.72■□□□□ 0.27
VPS16-201ENST00000380443 TRAV8-6A0A0B4J262 113 aa16.71■□□□□ 0.27
VPS16-201ENST00000380443 H3BRM9 83 aa16.71■□□□□ 0.27
VPS16-201ENST00000380443 AZU1P20160 251 aa16.71■□□□□ 0.27
VPS16-201ENST00000380443 MYMXA0A1B0GTQ4 84 aa16.7■□□□□ 0.26
VPS16-201ENST00000380443 C11orf86A6NJI1 115 aa16.7■□□□□ 0.26
VPS16-201ENST00000380443 NFE4Q86UQ8 179 aa16.7■□□□□ 0.26
VPS16-201ENST00000380443 CIDEAO60543 219 aa16.69■□□□□ 0.26
VPS16-201ENST00000380443 PF4P02776 101 aa16.69■□□□□ 0.26
VPS16-201ENST00000380443 UBE2V1Q13404 147 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms