RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 GTSCR1Q86UQ5 136 aa5.89□□□□□ -1.47
PDLIM5-204ENST00000380176 SMIM20Q8N5G0 67 aa5.89□□□□□ -1.47
PDLIM5-204ENST00000380176 POM121L12Q8N7R1 296 aa5.89□□□□□ -1.47
PDLIM5-204ENST00000380176 ODF3Q96PU9 254 aa5.89□□□□□ -1.47
PDLIM5-204ENST00000380176 LINC01619G3V211 115 aa5.88□□□□□ -1.47
PDLIM5-204ENST00000380176 LCE2AQ5TA79 106 aaPredicted RBP5.88□□□□□ -1.47
PDLIM5-204ENST00000380176 SUMO4Q6EEV6 95 aa5.88□□□□□ -1.47
PDLIM5-204ENST00000380176 C9orf85Q96MD7 179 aa5.88□□□□□ -1.47
PDLIM5-204ENST00000380176 DPM2O94777 84 aa5.88□□□□□ -1.47
PDLIM5-204ENST00000380176 PRM2P04554 102 aa5.88□□□□□ -1.47
PDLIM5-204ENST00000380176 Q6ZSV7 163 aa5.88□□□□□ -1.47
PDLIM5-204ENST00000380176 DLX4Q92988 240 aaPredicted RBP5.88□□□□□ -1.47
PDLIM5-204ENST00000380176 HELZ2Q9BYK8 2649 aaKnown RBP5.88□□□□□ -1.47
PDLIM5-204ENST00000380176 IGHV1OR15-1A0A075B7D0 117 aa5.88□□□□□ -1.47
PDLIM5-204ENST00000380176 DEFB131AP59861 70 aa5.88□□□□□ -1.47
PDLIM5-204ENST00000380176 ZC2HC1BQ5TFG8 222 aa5.88□□□□□ -1.47
PDLIM5-204ENST00000380176 FAM74A4Q5TZK3 123 aa5.88□□□□□ -1.47
PDLIM5-204ENST00000380176 FOXI2Q6ZQN5 318 aa5.88□□□□□ -1.47
PDLIM5-204ENST00000380176 TMEM61Q8N0U2 210 aa5.88□□□□□ -1.47
PDLIM5-204ENST00000380176 OR9G4Q8NGQ1 327 aa5.88□□□□□ -1.47
PDLIM5-204ENST00000380176 TOMM6Q96B49 74 aa5.88□□□□□ -1.47
PDLIM5-204ENST00000380176 CSDC2Q9Y534 153 aaKnown RBP5.88□□□□□ -1.47
PDLIM5-204ENST00000380176 A0A087WX48 190 aa5.87□□□□□ -1.47
PDLIM5-204ENST00000380176 F5H697 171 aa5.87□□□□□ -1.47
PDLIM5-204ENST00000380176 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.87□□□□□ -1.47
PDLIM5-204ENST00000380176 GAGE5Q13069 117 aa5.87□□□□□ -1.47
PDLIM5-204ENST00000380176 GAGE6Q13070 117 aa5.87□□□□□ -1.47
PDLIM5-204ENST00000380176 ORMDL2Q53FV1 153 aa5.87□□□□□ -1.47
PDLIM5-204ENST00000380176 TMEM97Q5BJF2 176 aa5.87□□□□□ -1.47
PDLIM5-204ENST00000380176 C2orf66Q6UXQ4 117 aa5.87□□□□□ -1.47
PDLIM5-204ENST00000380176 KLHL30-AS1Q8NEE0 82 aa5.87□□□□□ -1.47
PDLIM5-204ENST00000380176 C4orf3Q8WVX3 66 aa5.87□□□□□ -1.47
PDLIM5-204ENST00000380176 SCGB3A1Q96QR1 104 aa5.87□□□□□ -1.47
PDLIM5-204ENST00000380176 ESM1Q9NQ30 184 aa5.87□□□□□ -1.47
PDLIM5-204ENST00000380176 MTORP42345 2549 aa5.87□□□□□ -1.47
PDLIM5-204ENST00000380176 NIPBLQ6KC79 2804 aaeCLIP5.87□□□□□ -1.47
PDLIM5-204ENST00000380176 RBMY1BA6NDE4 496 aaKnown RBP5.87□□□□□ -1.47
PDLIM5-204ENST00000380176 RBMY1EA6NEQ0 496 aaKnown RBP5.87□□□□□ -1.47
PDLIM5-204ENST00000380176 DNAJC9-AS1A6NH13 148 aa5.87□□□□□ -1.47
PDLIM5-204ENST00000380176 RBMY1DP0C7P1 496 aaKnown RBP5.87□□□□□ -1.47
PDLIM5-204ENST00000380176 HTN1P15515 57 aa5.87□□□□□ -1.47
PDLIM5-204ENST00000380176 DUSP14O95147 198 aaKnown RBP5.86□□□□□ -1.47
PDLIM5-204ENST00000380176 POLR2KP53803 58 aaKnown RBP5.86□□□□□ -1.47
PDLIM5-204ENST00000380176 KMT2BQ9UMN6 2715 aaPredicted RBP5.86□□□□□ -1.47
PDLIM5-204ENST00000380176 CRYGDP07320 174 aa5.86□□□□□ -1.47
PDLIM5-204ENST00000380176 MRAPQ8TCY5 172 aa5.86□□□□□ -1.47
PDLIM5-204ENST00000380176 NACAE9PAV3 2078 aa5.85□□□□□ -1.47
PDLIM5-204ENST00000380176 MORN3Q6PF18 240 aaPredicted RBP5.85□□□□□ -1.47
PDLIM5-204ENST00000380176 NEXN-AS1Q8NBZ9 246 aa5.85□□□□□ -1.47
PDLIM5-204ENST00000380176 BAALCQ8WXS3 180 aa5.85□□□□□ -1.47
PDLIM5-204ENST00000380176 SPANXA1Q9NS26 97 aa5.85□□□□□ -1.47
PDLIM5-204ENST00000380176 H3BMM0 161 aa5.85□□□□□ -1.47
PDLIM5-204ENST00000380176 KRTAP1-1Q07627 177 aa5.85□□□□□ -1.47
PDLIM5-204ENST00000380176 ZNF876PQ49A33 203 aa5.85□□□□□ -1.47
PDLIM5-204ENST00000380176 MAPKAPK5-AS1Q8N8E1 139 aa5.85□□□□□ -1.47
PDLIM5-204ENST00000380176 SDHAF1A6NFY7 115 aa5.85□□□□□ -1.47
PDLIM5-204ENST00000380176 K7EMI3 77 aa5.85□□□□□ -1.47
PDLIM5-204ENST00000380176 TSHBP01222 138 aa5.85□□□□□ -1.47
PDLIM5-204ENST00000380176 HLA-DRB4P13762 266 aa5.85□□□□□ -1.47
PDLIM5-204ENST00000380176 RPL39P62891 51 aaKnown RBP5.85□□□□□ -1.47
PDLIM5-204ENST00000380176 ZFP2Q6ZN57 461 aa5.85□□□□□ -1.47
PDLIM5-204ENST00000380176 HLA-DRB4X5D2U9 266 aa5.85□□□□□ -1.47
PDLIM5-204ENST00000380176 TRAV12-1A0A0B4J245 112 aa5.84□□□□□ -1.47
PDLIM5-204ENST00000380176 A0A0U1RRA0 63 aa5.84□□□□□ -1.47
PDLIM5-204ENST00000380176 F8VRH5 84 aa5.84□□□□□ -1.47
PDLIM5-204ENST00000380176 H7C1H1 209 aa5.84□□□□□ -1.47
PDLIM5-204ENST00000380176 M0QY20 66 aa5.84□□□□□ -1.47
PDLIM5-204ENST00000380176 PPP1R17O96001 155 aa5.84□□□□□ -1.47
PDLIM5-204ENST00000380176 ZNF56Q15929 161 aa5.84□□□□□ -1.47
PDLIM5-204ENST00000380176 DEFB114Q30KQ6 69 aa5.84□□□□□ -1.47
PDLIM5-204ENST00000380176 CD300EQ496F6 205 aaPredicted RBP5.84□□□□□ -1.47
PDLIM5-204ENST00000380176 MAP6D1Q9H9H5 199 aa5.84□□□□□ -1.47
PDLIM5-204ENST00000380176 GAGE12BA1L429 117 aa5.84□□□□□ -1.47
PDLIM5-204ENST00000380176 TMEM86BQ8N661 226 aa5.84□□□□□ -1.47
PDLIM5-204ENST00000380176 TP53TG1Q9Y2A0 90 aa5.84□□□□□ -1.47
PDLIM5-204ENST00000380176 TRBV25-1A0A075B6N4 114 aa5.83□□□□□ -1.48
PDLIM5-204ENST00000380176 TRAV8-6A0A0B4J262 113 aa5.83□□□□□ -1.48
PDLIM5-204ENST00000380176 CD28P10747 220 aa5.83□□□□□ -1.48
PDLIM5-204ENST00000380176 PLA2G2AP14555 144 aa5.83□□□□□ -1.48
PDLIM5-204ENST00000380176 HSD52Q0P140 79 aa5.83□□□□□ -1.48
PDLIM5-204ENST00000380176 SMAGPQ0VAQ4 97 aa5.83□□□□□ -1.48
PDLIM5-204ENST00000380176 SYT8Q8NBV8 401 aa5.83□□□□□ -1.48
PDLIM5-204ENST00000380176 DYNLRB2Q8TF09 96 aa5.83□□□□□ -1.48
PDLIM5-204ENST00000380176 ERG28Q9UKR5 140 aa5.83□□□□□ -1.48
PDLIM5-204ENST00000380176 ZNF256Q9Y2P7 627 aaPredicted RBP5.83□□□□□ -1.48
PDLIM5-204ENST00000380176 UNC79Q9P2D8 2635 aa5.83□□□□□ -1.48
PDLIM5-204ENST00000380176 IGHV3-73A0A0B4J1V6 119 aa5.83□□□□□ -1.48
PDLIM5-204ENST00000380176 A8MTW9 85 aa5.83□□□□□ -1.48
PDLIM5-204ENST00000380176 VCYO14598 125 aa5.83□□□□□ -1.48
PDLIM5-204ENST00000380176 PLNP26678 52 aa5.83□□□□□ -1.48
PDLIM5-204ENST00000380176 PROK1P58294 105 aa5.83□□□□□ -1.48
PDLIM5-204ENST00000380176 SEC11AP67812 179 aa5.83□□□□□ -1.48
PDLIM5-204ENST00000380176 AMMECR1LQ6DCA0 310 aa5.83□□□□□ -1.48
PDLIM5-204ENST00000380176 TRBV27A0A0K0K1C4 114 aa5.83□□□□□ -1.48
PDLIM5-204ENST00000380176 SMIM9A6NGZ8 99 aa5.83□□□□□ -1.48
PDLIM5-204ENST00000380176 IGIPA6NJ69 53 aa5.83□□□□□ -1.48
PDLIM5-204ENST00000380176 CYSLTR1Q9Y271 337 aa5.83□□□□□ -1.48
PDLIM5-204ENST00000380176 SETXQ7Z333 2677 aaKnown RBP5.82□□□□□ -1.48
PDLIM5-204ENST00000380176 TRGV11A0A075B6L2 103 aa5.82□□□□□ -1.48
PDLIM5-204ENST00000380176 TRBV6-5A0A0K0K1A5 114 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms