RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 Q6YL49 198 aa12.61□□□□□ -0.39
RXRB-201ENST00000374680 IGHV3OR16-12A0A075B7B8 117 aa12.61□□□□□ -0.39
RXRB-201ENST00000374680 MORN3Q6PF18 240 aaPredicted RBP12.6□□□□□ -0.39
RXRB-201ENST00000374680 HIGD1BQ9P298 99 aa12.6□□□□□ -0.39
RXRB-201ENST00000374680 FN1P02751 2386 aaKnown RBP12.6□□□□□ -0.39
RXRB-201ENST00000374680 TRAV12-1A0A0B4J245 112 aa12.6□□□□□ -0.39
RXRB-201ENST00000374680 C12orf74Q32Q52 190 aa12.6□□□□□ -0.39
RXRB-201ENST00000374680 CEMP1Q6PRD7 247 aaPredicted RBP12.59□□□□□ -0.39
RXRB-201ENST00000374680 TMEM61Q8N0U2 210 aa12.59□□□□□ -0.39
RXRB-201ENST00000374680 ZNF843Q8N446 348 aa12.59□□□□□ -0.39
RXRB-201ENST00000374680 MED14OSP0DP75 135 aa12.59□□□□□ -0.39
RXRB-201ENST00000374680 CR1P17927 2039 aa12.59□□□□□ -0.39
RXRB-201ENST00000374680 AKAP9Q99996 3911 aa12.59□□□□□ -0.39
RXRB-201ENST00000374680 K7ERU9 68 aa12.58□□□□□ -0.39
RXRB-201ENST00000374680 M0QY20 66 aa12.58□□□□□ -0.4
RXRB-201ENST00000374680 APOMO95445 188 aa12.58□□□□□ -0.4
RXRB-201ENST00000374680 SYT8Q8NBV8 401 aa12.58□□□□□ -0.4
RXRB-201ENST00000374680 UBE2E2Q96LR5 201 aa12.58□□□□□ -0.4
RXRB-201ENST00000374680 TENM4Q6N022 2769 aa12.58□□□□□ -0.4
RXRB-201ENST00000374680 IGIPA6NJ69 53 aa12.57□□□□□ -0.4
RXRB-201ENST00000374680 H3BMG7 143 aa12.57□□□□□ -0.4
RXRB-201ENST00000374680 ELANEP08246 267 aa12.57□□□□□ -0.4
RXRB-201ENST00000374680 PHLDA1Q8WV24 401 aaPredicted RBP12.57□□□□□ -0.4
RXRB-201ENST00000374680 DLX4Q92988 240 aaPredicted RBP12.57□□□□□ -0.4
RXRB-201ENST00000374680 ZNF479Q96JC4 524 aa12.57□□□□□ -0.4
RXRB-201ENST00000374680 PPP1R17O96001 155 aa12.57□□□□□ -0.4
RXRB-201ENST00000374680 ZNRF2Q8NHG8 242 aa12.57□□□□□ -0.4
RXRB-201ENST00000374680 C9orf85Q96MD7 179 aa12.57□□□□□ -0.4
RXRB-201ENST00000374680 TM2D2Q9BX73 214 aa12.57□□□□□ -0.4
RXRB-201ENST00000374680 TRBV7-9A0A0J9YWB2 115 aa12.56□□□□□ -0.4
RXRB-201ENST00000374680 IGLL5B9A064 214 aa12.56□□□□□ -0.4
RXRB-201ENST00000374680 NXPH4O95158 308 aa12.56□□□□□ -0.4
RXRB-201ENST00000374680 IGLV4-69A0A075B6H9 119 aa12.56□□□□□ -0.4
RXRB-201ENST00000374680 PMVKQ15126 192 aa12.56□□□□□ -0.4
RXRB-201ENST00000374680 ZNF580Q9UK33 172 aa12.56□□□□□ -0.4
RXRB-201ENST00000374680 HELZ2Q9BYK8 2649 aaKnown RBP12.56□□□□□ -0.4
RXRB-201ENST00000374680 IGHV3-38A0A0C4DH36 116 aa12.55□□□□□ -0.4
RXRB-201ENST00000374680 J3QLI3 93 aa12.55□□□□□ -0.4
RXRB-201ENST00000374680 RBMY1BA6NDE4 496 aaKnown RBP12.55□□□□□ -0.4
RXRB-201ENST00000374680 RBMY1EA6NEQ0 496 aaKnown RBP12.55□□□□□ -0.4
RXRB-201ENST00000374680 RBMY1DP0C7P1 496 aaKnown RBP12.55□□□□□ -0.4
RXRB-201ENST00000374680 TSPEAR-AS2P59090 65 aa12.55□□□□□ -0.4
RXRB-201ENST00000374680 DEFB113Q30KQ7 82 aa12.55□□□□□ -0.4
RXRB-201ENST00000374680 DYNLRB2Q8TF09 96 aa12.55□□□□□ -0.4
RXRB-201ENST00000374680 E9PLD3 99 aa12.55□□□□□ -0.4
RXRB-201ENST00000374680 ADARB2-AS1A8MUL3 147 aa12.54□□□□□ -0.4
RXRB-201ENST00000374680 WFDC11Q8NEX6 87 aa12.54□□□□□ -0.4
RXRB-201ENST00000374680 TRBV7-3A0A075B6L6 115 aa12.54□□□□□ -0.4
RXRB-201ENST00000374680 WFDC2Q14508 124 aa12.54□□□□□ -0.4
RXRB-201ENST00000374680 FOXI2Q6ZQN5 318 aa12.54□□□□□ -0.4
RXRB-201ENST00000374680 XCL2Q9UBD3 114 aa12.54□□□□□ -0.4
RXRB-201ENST00000374680 SETXQ7Z333 2677 aaKnown RBP12.53□□□□□ -0.4
RXRB-201ENST00000374680 HIVEP2P31629 2446 aa12.53□□□□□ -0.4
RXRB-201ENST00000374680 LGALS9O00182 355 aa12.53□□□□□ -0.4
RXRB-201ENST00000374680 LINC01587Q99440 93 aa12.53□□□□□ -0.4
RXRB-201ENST00000374680 NBEAL2Q6ZNJ1 2754 aa12.52□□□□□ -0.4
RXRB-201ENST00000374680 Q6ZSN1 163 aa12.52□□□□□ -0.4
RXRB-201ENST00000374680 SPAG8Q99932 426 aaPredicted RBP12.52□□□□□ -0.4
RXRB-201ENST00000374680 LOC107984156A0A0G2JMH3 177 aa12.52□□□□□ -0.41
RXRB-201ENST00000374680 A0A0J9YXV3 536 aa12.52□□□□□ -0.41
RXRB-201ENST00000374680 SH2D6Q7Z4S9 175 aa12.52□□□□□ -0.41
RXRB-201ENST00000374680 ARL17AQ8IVW1 177 aa12.52□□□□□ -0.41
RXRB-201ENST00000374680 MRPL16Q9NX20 251 aaKnown RBP12.52□□□□□ -0.41
RXRB-201ENST00000374680 PGPEP1Q9NXJ5 209 aa12.52□□□□□ -0.41
RXRB-201ENST00000374680 TRBV27A0A0K0K1C4 114 aa12.51□□□□□ -0.41
RXRB-201ENST00000374680 LINC01549A6NIU2 74 aa12.51□□□□□ -0.41
RXRB-201ENST00000374680 LINC01619G3V211 115 aa12.51□□□□□ -0.41
RXRB-201ENST00000374680 H3BMM0 161 aa12.51□□□□□ -0.41
RXRB-201ENST00000374680 SAMD13Q5VXD3 122 aa12.51□□□□□ -0.41
RXRB-201ENST00000374680 POM121L12Q8N7R1 296 aa12.51□□□□□ -0.41
RXRB-201ENST00000374680 FASNP49327 2511 aaKnown RBP12.5□□□□□ -0.41
RXRB-201ENST00000374680 TEX48A0A1B0GUV7 120 aa12.5□□□□□ -0.41
RXRB-201ENST00000374680 TRPT1Q86TN4 253 aaKnown RBP12.5□□□□□ -0.41
RXRB-201ENST00000374680 SPXQ9BT56 116 aa12.5□□□□□ -0.41
RXRB-201ENST00000374680 HECTD1Q9ULT8 2610 aa12.5□□□□□ -0.41
RXRB-201ENST00000374680 H7C2G1 150 aa12.49□□□□□ -0.41
RXRB-201ENST00000374680 HERVK_113P61574 105 aa12.49□□□□□ -0.41
RXRB-201ENST00000374680 ETDBQ3ZM63 59 aa12.48□□□□□ -0.41
RXRB-201ENST00000374680 OR5A1Q8NGJ0 315 aa12.48□□□□□ -0.41
RXRB-201ENST00000374680 VCX2Q9H322 139 aa12.48□□□□□ -0.41
RXRB-201ENST00000374680 TRGV11A0A075B6L2 103 aa12.48□□□□□ -0.41
RXRB-201ENST00000374680 FSHBP01225 129 aa12.48□□□□□ -0.41
RXRB-201ENST00000374680 CD28P10747 220 aa12.48□□□□□ -0.41
RXRB-201ENST00000374680 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.48□□□□□ -0.41
RXRB-201ENST00000374680 IGKV2-29A2NJV5 120 aaPredicted RBP12.48□□□□□ -0.41
RXRB-201ENST00000374680 TMEM89A2RUT3 159 aa12.48□□□□□ -0.41
RXRB-201ENST00000374680 I3L3M4 83 aa12.48□□□□□ -0.41
RXRB-201ENST00000374680 IGHV3-53P01767 116 aa12.48□□□□□ -0.41
RXRB-201ENST00000374680 TNFRSF18Q9Y5U5 241 aa12.48□□□□□ -0.41
RXRB-201ENST00000374680 A8MZ25 164 aa12.47□□□□□ -0.41
RXRB-201ENST00000374680 AZU1P20160 251 aa12.47□□□□□ -0.41
RXRB-201ENST00000374680 MAP6D1Q9H9H5 199 aa12.47□□□□□ -0.41
RXRB-201ENST00000374680 RRN3P1Q2M238 152 aa12.47□□□□□ -0.41
RXRB-201ENST00000374680 C20orf203Q8NBC4 194 aa12.47□□□□□ -0.41
RXRB-201ENST00000374680 LGALS3P17931 250 aaKnown RBP12.46□□□□□ -0.41
RXRB-201ENST00000374680 Q6ZSV7 163 aa12.46□□□□□ -0.41
RXRB-201ENST00000374680 TMEM141Q96I45 108 aa12.46□□□□□ -0.41
RXRB-201ENST00000374680 ODF3Q96PU9 254 aa12.46□□□□□ -0.41
RXRB-201ENST00000374680 A0A0J9YY99 117 aa12.46□□□□□ -0.42
RXRB-201ENST00000374680 J3QQQ9 107 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms