RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 M0QY20 66 aa6.92□□□□□ -1.3
PTPN20-202ENST00000374339 HSBP1O75506 76 aa6.92□□□□□ -1.3
PTPN20-202ENST00000374339 SPART-AS1P0CW21 52 aa6.92□□□□□ -1.3
PTPN20-202ENST00000374339 DEFB130BP0DP73 79 aa6.92□□□□□ -1.3
PTPN20-202ENST00000374339 DEFB130AP0DP74 79 aa6.92□□□□□ -1.3
PTPN20-202ENST00000374339 GATA1P15976 413 aaPredicted RBP6.92□□□□□ -1.3
PTPN20-202ENST00000374339 SUMO2P61956 95 aaKnown RBP6.92□□□□□ -1.3
PTPN20-202ENST00000374339 RPL32P62910 135 aaKnown RBP6.92□□□□□ -1.3
PTPN20-202ENST00000374339 FAM222AQ5U5X8 452 aa6.92□□□□□ -1.3
PTPN20-202ENST00000374339 NIT1Q86X76 327 aa6.92□□□□□ -1.3
PTPN20-202ENST00000374339 HIST3H2BBQ8N257 126 aa6.92□□□□□ -1.3
PTPN20-202ENST00000374339 C11orf68Q9H3H3 251 aaKnown RBP6.92□□□□□ -1.3
PTPN20-202ENST00000374339 AP5S1Q9NUS5 200 aa6.92□□□□□ -1.3
PTPN20-202ENST00000374339 DKK2Q9UBU2 259 aa6.92□□□□□ -1.3
PTPN20-202ENST00000374339 NBEAL1Q6ZS30 2694 aa6.91□□□□□ -1.3
PTPN20-202ENST00000374339 NACAE9PAV3 2078 aa6.91□□□□□ -1.3
PTPN20-202ENST00000374339 IGHV3-73A0A0B4J1V6 119 aa6.91□□□□□ -1.3
PTPN20-202ENST00000374339 LOC389332A0A1B0GUA5 103 aa6.91□□□□□ -1.3
PTPN20-202ENST00000374339 K7EMI3 77 aa6.91□□□□□ -1.3
PTPN20-202ENST00000374339 GAS8-AS1O95177 125 aa6.91□□□□□ -1.3
PTPN20-202ENST00000374339 IFI27P40305 119 aaPredicted RBP6.91□□□□□ -1.3
PTPN20-202ENST00000374339 DAD1P61803 113 aa6.91□□□□□ -1.3
PTPN20-202ENST00000374339 SBSPONQ8IVN8 264 aa6.91□□□□□ -1.3
PTPN20-202ENST00000374339 Q8N8P6 123 aa6.91□□□□□ -1.3
PTPN20-202ENST00000374339 TMEM18Q96B42 140 aa6.91□□□□□ -1.3
PTPN20-202ENST00000374339 RPL39LQ96EH5 51 aaKnown RBP6.91□□□□□ -1.3
PTPN20-202ENST00000374339 ZNF479Q96JC4 524 aa6.91□□□□□ -1.3
PTPN20-202ENST00000374339 PACRGQ96M98 296 aaPredicted RBP6.91□□□□□ -1.3
PTPN20-202ENST00000374339 SMIM2Q9BVW6 85 aa6.91□□□□□ -1.3
PTPN20-202ENST00000374339 NOTCH1P46531 2555 aa6.91□□□□□ -1.3
PTPN20-202ENST00000374339 TRGV4A0A0C4DH28 118 aa6.9□□□□□ -1.31
PTPN20-202ENST00000374339 TRBV10-1A0A0K0K1A3 114 aa6.9□□□□□ -1.31
PTPN20-202ENST00000374339 LINC01546A6NGU7 62 aa6.9□□□□□ -1.31
PTPN20-202ENST00000374339 TCAPO15273 167 aa6.9□□□□□ -1.31
PTPN20-202ENST00000374339 LINC00310P59036 64 aa6.9□□□□□ -1.31
PTPN20-202ENST00000374339 PDZD11Q5EBL8 140 aa6.9□□□□□ -1.31
PTPN20-202ENST00000374339 DNAJC30Q96LL9 226 aa6.9□□□□□ -1.31
PTPN20-202ENST00000374339 TM2D3Q9BRN9 247 aa6.9□□□□□ -1.31
PTPN20-202ENST00000374339 RETNQ9HD89 108 aa6.9□□□□□ -1.31
PTPN20-202ENST00000374339 TNFRSF18Q9Y5U5 241 aa6.9□□□□□ -1.31
PTPN20-202ENST00000374339 MGAM2Q2M2H8 2515 aa6.9□□□□□ -1.31
PTPN20-202ENST00000374339 TRBV6-4A0A1B0GX49 114 aa6.89□□□□□ -1.31
PTPN20-202ENST00000374339 K7EQD1 137 aa6.89□□□□□ -1.31
PTPN20-202ENST00000374339 VCYO14598 125 aa6.89□□□□□ -1.31
PTPN20-202ENST00000374339 DEFB4AO15263 64 aa6.89□□□□□ -1.31
PTPN20-202ENST00000374339 MRAPQ8TCY5 172 aa6.89□□□□□ -1.31
PTPN20-202ENST00000374339 KIR2DL4Q99706 377 aa6.89□□□□□ -1.31
PTPN20-202ENST00000374339 ZMAT4Q9H898 229 aa6.89□□□□□ -1.31
PTPN20-202ENST00000374339 NBEAL2Q6ZNJ1 2754 aa6.88□□□□□ -1.31
PTPN20-202ENST00000374339 TRBV27A0A0K0K1C4 114 aa6.88□□□□□ -1.31
PTPN20-202ENST00000374339 SDHAF1A6NFY7 115 aa6.88□□□□□ -1.31
PTPN20-202ENST00000374339 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.88□□□□□ -1.31
PTPN20-202ENST00000374339 NUPR1O60356 82 aa6.88□□□□□ -1.31
PTPN20-202ENST00000374339 ATP5G1P05496 136 aa6.88□□□□□ -1.31
PTPN20-202ENST00000374339 FABP4P15090 132 aa6.88□□□□□ -1.31
PTPN20-202ENST00000374339 G0S2P27469 103 aa6.88□□□□□ -1.31
PTPN20-202ENST00000374339 AMTP48728 403 aa6.88□□□□□ -1.31
PTPN20-202ENST00000374339 POLR2KP53803 58 aaKnown RBP6.88□□□□□ -1.31
PTPN20-202ENST00000374339 ORMDL2Q53FV1 153 aa6.88□□□□□ -1.31
PTPN20-202ENST00000374339 Q6ZSN1 163 aa6.88□□□□□ -1.31
PTPN20-202ENST00000374339 URB1-AS1Q96HZ7 61 aa6.88□□□□□ -1.31
PTPN20-202ENST00000374339 HIST1H2BLQ99880 126 aa6.88□□□□□ -1.31
PTPN20-202ENST00000374339 PRADC1Q9BSG0 188 aa6.88□□□□□ -1.31
PTPN20-202ENST00000374339 TMEM70Q9BUB7 260 aa6.88□□□□□ -1.31
PTPN20-202ENST00000374339 KRTAP9-2Q9BYQ4 174 aa6.88□□□□□ -1.31
PTPN20-202ENST00000374339 IGLV2-18A0A075B6J9 118 aa6.87□□□□□ -1.31
PTPN20-202ENST00000374339 I3L3M4 83 aa6.87□□□□□ -1.31
PTPN20-202ENST00000374339 RPL36AP83881 106 aaKnown RBP6.87□□□□□ -1.31
PTPN20-202ENST00000374339 FHL2Q14192 279 aa6.87□□□□□ -1.31
PTPN20-202ENST00000374339 LAGE3Q14657 143 aa6.87□□□□□ -1.31
PTPN20-202ENST00000374339 RHOHQ15669 191 aa6.87□□□□□ -1.31
PTPN20-202ENST00000374339 SLC25A29Q8N8R3 303 aa6.87□□□□□ -1.31
PTPN20-202ENST00000374339 NEXN-AS1Q8NBZ9 246 aa6.87□□□□□ -1.31
PTPN20-202ENST00000374339 RPL36ALQ969Q0 106 aaKnown RBP6.87□□□□□ -1.31
PTPN20-202ENST00000374339 CELA1Q9UNI1 258 aa6.87□□□□□ -1.31
PTPN20-202ENST00000374339 TRBV7-3A0A075B6L6 115 aa6.86□□□□□ -1.31
PTPN20-202ENST00000374339 IGHV1-24A0A0C4DH33 117 aa6.86□□□□□ -1.31
PTPN20-202ENST00000374339 LINC01549A6NIU2 74 aa6.86□□□□□ -1.31
PTPN20-202ENST00000374339 IFITM10A6NMD0 228 aa6.86□□□□□ -1.31
PTPN20-202ENST00000374339 FCER1GP30273 86 aa6.86□□□□□ -1.31
PTPN20-202ENST00000374339 FAM19A2Q8N3H0 131 aa6.86□□□□□ -1.31
PTPN20-202ENST00000374339 B9D2Q9BPU9 175 aa6.86□□□□□ -1.31
PTPN20-202ENST00000374339 PRO0255Q9UI72 69 aa6.86□□□□□ -1.31
PTPN20-202ENST00000374339 HHLA3Q9XRX5 114 aa6.86□□□□□ -1.31
PTPN20-202ENST00000374339 HBDP02042 147 aa6.85□□□□□ -1.31
PTPN20-202ENST00000374339 P0DMU3 169 aa6.85□□□□□ -1.31
PTPN20-202ENST00000374339 FAM231AP0DMU4 169 aa6.85□□□□□ -1.31
PTPN20-202ENST00000374339 FAM231CP0DMU5 169 aa6.85□□□□□ -1.31
PTPN20-202ENST00000374339 TNP2Q05952 138 aa6.85□□□□□ -1.31
PTPN20-202ENST00000374339 CFAP161Q6P656 301 aa6.85□□□□□ -1.31
PTPN20-202ENST00000374339 HSPB8Q9UJY1 196 aa6.85□□□□□ -1.31
PTPN20-202ENST00000374339 A0A0J9YWU9 116 aa6.84□□□□□ -1.31
PTPN20-202ENST00000374339 KRTAP9-6A0A140TA67 174 aa6.84□□□□□ -1.31
PTPN20-202ENST00000374339 LEPROTL1O95214 131 aa6.84□□□□□ -1.31
PTPN20-202ENST00000374339 NUDT3O95989 172 aa6.84□□□□□ -1.31
PTPN20-202ENST00000374339 AKR1D1P51857 326 aa6.84□□□□□ -1.31
PTPN20-202ENST00000374339 CRYBA4P53673 196 aa6.84□□□□□ -1.31
PTPN20-202ENST00000374339 PMCHL1Q16048 86 aa6.84□□□□□ -1.31
PTPN20-202ENST00000374339 DAZ4Q86SG3 579 aaKnown RBP6.84□□□□□ -1.31
PTPN20-202ENST00000374339 ZNRF2Q8NHG8 242 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms