RNA–Protein interactions for RNA: ENST00000373993.5

A1CF-202, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene A1CF, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-202ENST00000373993 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.87□□□□□ -0.676e-21■■■■■ 60.1
A1CF-202ENST00000373993 IGLV11-55A0A075B6I3 123 aa10.87□□□□□ -0.67
A1CF-202ENST00000373993 A0A1B0GX51 115 aa10.87□□□□□ -0.67
A1CF-202ENST00000373993 TMEM178BH3BS89 294 aa10.87□□□□□ -0.67
A1CF-202ENST00000373993 PMVKQ15126 192 aa10.87□□□□□ -0.67
A1CF-202ENST00000373993 CFHR4Q92496 578 aa10.87□□□□□ -0.67
A1CF-202ENST00000373993 TIMM17AQ99595 171 aa10.87□□□□□ -0.67
A1CF-202ENST00000373993 FBN1P35555 2871 aaKnown RBP10.87□□□□□ -0.67
A1CF-202ENST00000373993 LINC01548A6NM66 108 aa10.86□□□□□ -0.67
A1CF-202ENST00000373993 BUB1B-PAK6H3BSN5 160 aa10.86□□□□□ -0.67
A1CF-202ENST00000373993 RPS28P62857 69 aaKnown RBP10.86□□□□□ -0.67
A1CF-202ENST00000373993 SPANXN1Q5VSR9 72 aa10.86□□□□□ -0.67
A1CF-202ENST00000373993 NPBQ8NG41 125 aa10.86□□□□□ -0.67
A1CF-202ENST00000373993 DPH3P1Q9H4G8 78 aa10.86□□□□□ -0.67
A1CF-202ENST00000373993 TGFAP01135 160 aa10.86□□□□□ -0.67
A1CF-202ENST00000373993 TRGV3P03979 118 aa10.86□□□□□ -0.67
A1CF-202ENST00000373993 C9orf47Q6ZRZ4 202 aa10.86□□□□□ -0.67
A1CF-202ENST00000373993 Q8TAT8 98 aa10.86□□□□□ -0.67
A1CF-202ENST00000373993 LINC01587Q99440 93 aa10.86□□□□□ -0.67
A1CF-202ENST00000373993 SMAD5-AS1Q9Y6J3 95 aa10.86□□□□□ -0.67
A1CF-202ENST00000373993 C17orf100A8MU93 164 aa10.85□□□□□ -0.67
A1CF-202ENST00000373993 WIPF1O43516 503 aa10.85□□□□□ -0.67
A1CF-202ENST00000373993 KLK9Q2XQG4 91 aa10.85□□□□□ -0.67
A1CF-202ENST00000373993 TMEM101Q96IK0 257 aa10.85□□□□□ -0.67
A1CF-202ENST00000373993 KLK9Q9UKQ9 250 aa10.85□□□□□ -0.67
A1CF-202ENST00000373993 COL6A5A8TX70 2615 aa10.85□□□□□ -0.67
A1CF-202ENST00000373993 SDHAF1A6NFY7 115 aa10.85□□□□□ -0.67
A1CF-202ENST00000373993 CNTFRP26992 372 aa10.85□□□□□ -0.67
A1CF-202ENST00000373993 CCL8P80075 99 aa10.85□□□□□ -0.67
A1CF-202ENST00000373993 DYNAPQ8N1N2 210 aa10.85□□□□□ -0.67
A1CF-202ENST00000373993 CITED2Q99967 270 aaPredicted RBP10.85□□□□□ -0.67
A1CF-202ENST00000373993 C21orf62Q9NYP8 219 aa10.85□□□□□ -0.67
A1CF-202ENST00000373993 IGLV4-69A0A075B6H9 119 aa10.84□□□□□ -0.67
A1CF-202ENST00000373993 IGHV4OR15-8A0A075B7B6 117 aa10.84□□□□□ -0.67
A1CF-202ENST00000373993 A0A087WW49 117 aa10.84□□□□□ -0.67
A1CF-202ENST00000373993 LY6LH3BQJ8 138 aa10.84□□□□□ -0.67
A1CF-202ENST00000373993 MXRA5Q9NR99 2828 aa10.83□□□□□ -0.68
A1CF-202ENST00000373993 CRYGDP07320 174 aa10.83□□□□□ -0.68
A1CF-202ENST00000373993 EBI3Q14213 229 aa10.83□□□□□ -0.68
A1CF-202ENST00000373993 AMELXQ99217 191 aa10.83□□□□□ -0.68
A1CF-202ENST00000373993 IGIPA6NJ69 53 aa10.83□□□□□ -0.68
A1CF-202ENST00000373993 LEPROTO15243 131 aa10.83□□□□□ -0.68
A1CF-202ENST00000373993 FANCD2OSQ96PS1 177 aa10.83□□□□□ -0.68
A1CF-202ENST00000373993 IGHV3-72A0A0B4J1Y9 119 aa10.82□□□□□ -0.68
A1CF-202ENST00000373993 F8W735 103 aaPredicted RBP10.82□□□□□ -0.68
A1CF-202ENST00000373993 J3QQQ9 107 aa10.82□□□□□ -0.68
A1CF-202ENST00000373993 COX6CP09669 75 aa10.82□□□□□ -0.68
A1CF-202ENST00000373993 LGALS3P17931 250 aaKnown RBP10.82□□□□□ -0.68
A1CF-202ENST00000373993 A4D1N5 150 aa10.81□□□□□ -0.68
A1CF-202ENST00000373993 UQCRQO14949 82 aa10.81□□□□□ -0.68
A1CF-202ENST00000373993 NBR2O15453 112 aa10.81□□□□□ -0.68
A1CF-202ENST00000373993 KLHL30-AS1Q8NEE0 82 aa10.81□□□□□ -0.68
A1CF-202ENST00000373993 C11orf21Q9P2W6 132 aa10.81□□□□□ -0.68
A1CF-202ENST00000373993 APELAP0DMC3 54 aa10.81□□□□□ -0.68
A1CF-202ENST00000373993 ZNF876PQ49A33 203 aa10.81□□□□□ -0.68
A1CF-202ENST00000373993 AGPAT4-IT1Q9H0P7 198 aa10.81□□□□□ -0.68
A1CF-202ENST00000373993 CTSZQ9UBR2 303 aa10.81□□□□□ -0.68
A1CF-202ENST00000373993 SFTA2Q6UW10 78 aa10.8□□□□□ -0.68
A1CF-202ENST00000373993 Q6ZQT7 251 aa10.8□□□□□ -0.68
A1CF-202ENST00000373993 LINC01356Q8N9X3 169 aa10.8□□□□□ -0.68
A1CF-202ENST00000373993 IGHV1-69P01742 117 aa10.79□□□□□ -0.68
A1CF-202ENST00000373993 CRIP2P52943 208 aaPredicted RBP10.79□□□□□ -0.68
A1CF-202ENST00000373993 ANXA2RQ3ZCQ2 193 aa10.79□□□□□ -0.68
A1CF-202ENST00000373993 C2orf82Q6UX34 121 aa10.79□□□□□ -0.68
A1CF-202ENST00000373993 C3orf22Q8N5N4 141 aa10.79□□□□□ -0.68
A1CF-202ENST00000373993 LINC00526Q96FQ7 95 aa10.79□□□□□ -0.68
A1CF-202ENST00000373993 TRAV26-2A0A0B4J265 109 aa10.79□□□□□ -0.68
A1CF-202ENST00000373993 CXCL5P42830 114 aa10.79□□□□□ -0.68
A1CF-202ENST00000373993 TRPT1Q86TN4 253 aaKnown RBP10.79□□□□□ -0.68
A1CF-202ENST00000373993 PLXNB1O43157 2135 aa10.78□□□□□ -0.68
A1CF-202ENST00000373993 CTSGP08311 255 aa10.78□□□□□ -0.68
A1CF-202ENST00000373993 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.78□□□□□ -0.68
A1CF-202ENST00000373993 CCL17Q92583 94 aa10.78□□□□□ -0.68
A1CF-202ENST00000373993 CSDC2Q9Y534 153 aaKnown RBP10.78□□□□□ -0.68
A1CF-202ENST00000373993 TEX49A0A1B0GTD5 131 aa10.77□□□□□ -0.68
A1CF-202ENST00000373993 J3KT08 172 aa10.77□□□□□ -0.68
A1CF-202ENST00000373993 VCYO14598 125 aa10.77□□□□□ -0.68
A1CF-202ENST00000373993 BUB3O43684 328 aa10.77□□□□□ -0.68
A1CF-202ENST00000373993 NXPH4O95158 308 aa10.77□□□□□ -0.68
A1CF-202ENST00000373993 Q6ZS46 218 aa10.77□□□□□ -0.68
A1CF-202ENST00000373993 LINC00477Q96M19 166 aa10.77□□□□□ -0.68
A1CF-202ENST00000373993 NDUFA7O95182 113 aa10.77□□□□□ -0.69
A1CF-202ENST00000373993 DLX1P56177 255 aa10.77□□□□□ -0.69
A1CF-202ENST00000373993 LYPD2Q6UXB3 125 aa10.77□□□□□ -0.69
A1CF-202ENST00000373993 ZFAND3Q9H8U3 227 aa10.77□□□□□ -0.69
A1CF-202ENST00000373993 WNK2Q9Y3S1 2297 aa10.77□□□□□ -0.69
A1CF-202ENST00000373993 B4DSR2 109 aa10.76□□□□□ -0.69
A1CF-202ENST00000373993 POLR2KP53803 58 aaKnown RBP10.76□□□□□ -0.69
A1CF-202ENST00000373993 LINC00643Q86TS7 51 aa10.76□□□□□ -0.69
A1CF-202ENST00000373993 GPHB5Q86YW7 130 aa10.76□□□□□ -0.69
A1CF-202ENST00000373993 PPDPFQ9H3Y8 114 aa10.76□□□□□ -0.69
A1CF-202ENST00000373993 ARHGAP32A7KAX9 2087 aa10.76□□□□□ -0.69
A1CF-202ENST00000373993 TRAV21A0A0B4J279 112 aa10.76□□□□□ -0.69
A1CF-202ENST00000373993 TMEM223A0PJW6 202 aa10.76□□□□□ -0.69
A1CF-202ENST00000373993 PRAC2D3DTV9 90 aa10.76□□□□□ -0.69
A1CF-202ENST00000373993 H7C423 109 aa10.76□□□□□ -0.69
A1CF-202ENST00000373993 TSHBP01222 138 aa10.76□□□□□ -0.69
A1CF-202ENST00000373993 SDIM1Q6ZPB5 146 aa10.76□□□□□ -0.69
A1CF-202ENST00000373993 KLK15Q9H2R5 256 aa10.76□□□□□ -0.69
A1CF-202ENST00000373993 STAB1Q9NY15 2570 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms