RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 KRTAP1-1Q07627 177 aa13.72□□□□□ -0.21
USP49-202ENST00000373010 ACANP16112 2415 aa13.72□□□□□ -0.21
USP49-202ENST00000373010 OR11H12B2RN74 326 aa13.72□□□□□ -0.21
USP49-202ENST00000373010 H3BUT2 72 aa13.72□□□□□ -0.21
USP49-202ENST00000373010 CD28P10747 220 aa13.72□□□□□ -0.21
USP49-202ENST00000373010 OR11H2Q8NH07 326 aa13.72□□□□□ -0.21
USP49-202ENST00000373010 CUBNO60494 3623 aa13.71□□□□□ -0.21
USP49-202ENST00000373010 PROK1P58294 105 aa13.71□□□□□ -0.21
USP49-202ENST00000373010 IGLV4-69A0A075B6H9 119 aa13.7□□□□□ -0.22
USP49-202ENST00000373010 C11orf86A6NJI1 115 aa13.7□□□□□ -0.22
USP49-202ENST00000373010 YAE1D1Q9NRH1 226 aa13.7□□□□□ -0.22
USP49-202ENST00000373010 P0DMU3 169 aa13.7□□□□□ -0.22
USP49-202ENST00000373010 FAM231AP0DMU4 169 aa13.7□□□□□ -0.22
USP49-202ENST00000373010 FAM231CP0DMU5 169 aa13.7□□□□□ -0.22
USP49-202ENST00000373010 PMVKQ15126 192 aa13.7□□□□□ -0.22
USP49-202ENST00000373010 TMEM141Q96I45 108 aa13.7□□□□□ -0.22
USP49-202ENST00000373010 PRADC1Q9BSG0 188 aa13.7□□□□□ -0.22
USP49-202ENST00000373010 CST9LQ9H4G1 147 aa13.7□□□□□ -0.22
USP49-202ENST00000373010 CEND1Q8N111 149 aa13.69□□□□□ -0.22
USP49-202ENST00000373010 TIMM17AQ99595 171 aa13.69□□□□□ -0.22
USP49-202ENST00000373010 MYMXA0A1B0GTQ4 84 aa13.69□□□□□ -0.22
USP49-202ENST00000373010 OPRPNQ99935 248 aaPredicted RBP13.69□□□□□ -0.22
USP49-202ENST00000373010 ITPR2Q14571 2701 aa13.68□□□□□ -0.22
USP49-202ENST00000373010 NACAE9PAV3 2078 aa13.68□□□□□ -0.22
USP49-202ENST00000373010 LINC01549A6NIU2 74 aa13.68□□□□□ -0.22
USP49-202ENST00000373010 E9PLD3 99 aa13.68□□□□□ -0.22
USP49-202ENST00000373010 K7ERJ3 54 aa13.68□□□□□ -0.22
USP49-202ENST00000373010 PLA2G2AP14555 144 aa13.68□□□□□ -0.22
USP49-202ENST00000373010 LINC01587Q99440 93 aa13.68□□□□□ -0.22
USP49-202ENST00000373010 SPAG8Q99932 426 aaPredicted RBP13.68□□□□□ -0.22
USP49-202ENST00000373010 CCL24O00175 119 aa13.68□□□□□ -0.22
USP49-202ENST00000373010 SMIM13P0DJ93 91 aa13.68□□□□□ -0.22
USP49-202ENST00000373010 NSUN5P1Q3KNT7 163 aa13.68□□□□□ -0.22
USP49-202ENST00000373010 TM2D2Q9BX73 214 aa13.68□□□□□ -0.22
USP49-202ENST00000373010 SETD2Q9BYW2 2564 aaPredicted RBP13.68□□□□□ -0.22
USP49-202ENST00000373010 FHL3Q13643 280 aa13.67□□□□□ -0.22
USP49-202ENST00000373010 ODF3L2Q3SX64 289 aa13.67□□□□□ -0.22
USP49-202ENST00000373010 CITED2Q99967 270 aaPredicted RBP13.67□□□□□ -0.22
USP49-202ENST00000373010 I3L3M4 83 aa13.66□□□□□ -0.22
USP49-202ENST00000373010 M0R2P5 195 aa13.66□□□□□ -0.22
USP49-202ENST00000373010 ZNF415Q09FC8 603 aa13.66□□□□□ -0.22
USP49-202ENST00000373010 RHOHQ15669 191 aa13.66□□□□□ -0.22
USP49-202ENST00000373010 NHP2Q9NX24 153 aaKnown RBP13.66□□□□□ -0.22
USP49-202ENST00000373010 GAGE10A6NGK3 116 aa13.65□□□□□ -0.22
USP49-202ENST00000373010 HIST1H4GQ99525 98 aa13.65□□□□□ -0.22
USP49-202ENST00000373010 UFSP1Q6NVU6 142 aa13.65□□□□□ -0.22
USP49-202ENST00000373010 RNASE8Q8TDE3 154 aaKnown RBP13.65□□□□□ -0.22
USP49-202ENST00000373010 Q9UF83 564 aa13.65□□□□□ -0.22
USP49-202ENST00000373010 J3QKU1 62 aa13.64□□□□□ -0.23
USP49-202ENST00000373010 INSP01308 110 aa13.64□□□□□ -0.23
USP49-202ENST00000373010 Q6ZSN1 163 aa13.64□□□□□ -0.23
USP49-202ENST00000373010 C20orf203Q8NBC4 194 aa13.64□□□□□ -0.23
USP49-202ENST00000373010 C11orf72Q8NBR9 251 aa13.64□□□□□ -0.23
USP49-202ENST00000373010 XCL2Q9UBD3 114 aa13.64□□□□□ -0.23
USP49-202ENST00000373010 ZNRF2Q8NHG8 242 aa13.64□□□□□ -0.23
USP49-202ENST00000373010 LINC01006Q8NI28 216 aa13.64□□□□□ -0.23
USP49-202ENST00000373010 MTORP42345 2549 aa13.64□□□□□ -0.23
USP49-202ENST00000373010 HELZ2Q9BYK8 2649 aaKnown RBP13.63□□□□□ -0.23
USP49-202ENST00000373010 ZNF815PA8K554 130 aa13.63□□□□□ -0.23
USP49-202ENST00000373010 TAL2Q16559 108 aa13.63□□□□□ -0.23
USP49-202ENST00000373010 MRPL16Q9NX20 251 aaKnown RBP13.63□□□□□ -0.23
USP49-202ENST00000373010 TRBV7-3A0A075B6L6 115 aa13.63□□□□□ -0.23
USP49-202ENST00000373010 A8MWV9 139 aa13.63□□□□□ -0.23
USP49-202ENST00000373010 PAPPA-AS1Q5QFB9 102 aa13.63□□□□□ -0.23
USP49-202ENST00000373010 PHLDA1Q8WV24 401 aaPredicted RBP13.63□□□□□ -0.23
USP49-202ENST00000373010 A0A1W2PPM0 123 aa13.62□□□□□ -0.23
USP49-202ENST00000373010 CFAP126Q5VTH2 177 aa13.62□□□□□ -0.23
USP49-202ENST00000373010 PLEKHB2Q96CS7 222 aa13.62□□□□□ -0.23
USP49-202ENST00000373010 TRAV25A0A0B4J276 109 aa13.62□□□□□ -0.23
USP49-202ENST00000373010 TMEM170BQ5T4T1 132 aa13.62□□□□□ -0.23
USP49-202ENST00000373010 EDA2RQ9HAV5 297 aa13.62□□□□□ -0.23
USP49-202ENST00000373010 STHQ8IWL8 128 aa13.61□□□□□ -0.23
USP49-202ENST00000373010 KMT2BQ9UMN6 2715 aaPredicted RBP13.61□□□□□ -0.23
USP49-202ENST00000373010 K7EP34 96 aa13.61□□□□□ -0.23
USP49-202ENST00000373010 AZU1P20160 251 aa13.61□□□□□ -0.23
USP49-202ENST00000373010 SCGB2A2Q13296 93 aa13.61□□□□□ -0.23
USP49-202ENST00000373010 SAMD5Q5TGI4 173 aa13.61□□□□□ -0.23
USP49-202ENST00000373010 TNFRSF18Q9Y5U5 241 aa13.61□□□□□ -0.23
USP49-202ENST00000373010 IGHV3OR16-12A0A075B7B8 117 aa13.6□□□□□ -0.23
USP49-202ENST00000373010 RNASE1P07998 156 aaKnown RBP13.6□□□□□ -0.23
USP49-202ENST00000373010 GTF2H5Q6ZYL4 71 aa13.6□□□□□ -0.23
USP49-202ENST00000373010 LINC00467Q9BRT7 94 aa13.6□□□□□ -0.23
USP49-202ENST00000373010 TSSC4Q9Y5U2 329 aaPredicted RBP13.6□□□□□ -0.23
USP49-202ENST00000373010 GAGE12BA1L429 117 aa13.6□□□□□ -0.23
USP49-202ENST00000373010 HERVK_113P61574 105 aa13.6□□□□□ -0.23
USP49-202ENST00000373010 ANK3Q12955 4377 aaKnown RBP13.6□□□□□ -0.23
USP49-202ENST00000373010 NIPBLQ6KC79 2804 aaeCLIP13.59□□□□□ -0.23
USP49-202ENST00000373010 TSPEAR-AS2P59090 65 aa13.59□□□□□ -0.23
USP49-202ENST00000373010 PIK3CD-AS1Q5SR53 167 aa13.59□□□□□ -0.23
USP49-202ENST00000373010 SCGB1D4Q6XE38 83 aa13.59□□□□□ -0.23
USP49-202ENST00000373010 IGLV4-3A0A075B6K6 122 aa13.58□□□□□ -0.24
USP49-202ENST00000373010 C12orf74Q32Q52 190 aa13.58□□□□□ -0.24
USP49-202ENST00000373010 C1orf158Q8N1D5 194 aa13.58□□□□□ -0.24
USP49-202ENST00000373010 PTH2Q96A98 100 aa13.58□□□□□ -0.24
USP49-202ENST00000373010 CLUHP3Q96NS8 147 aa13.58□□□□□ -0.24
USP49-202ENST00000373010 C16orf95Q9H693 158 aa13.58□□□□□ -0.24
USP49-202ENST00000373010 SPCS1Q9Y6A9 102 aa13.58□□□□□ -0.24
USP49-202ENST00000373010 UNC79Q9P2D8 2635 aa13.58□□□□□ -0.24
USP49-202ENST00000373010 SPXQ9BT56 116 aa13.58□□□□□ -0.24
USP49-202ENST00000373010 FABP2P12104 132 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms