RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 A0A087WWL8 130 aa14.63□□□□□ -0.07
LHX3-202ENST00000371748 TMEM238C9JI98 176 aa14.63□□□□□ -0.07
LHX3-202ENST00000371748 LINC00315P59091 139 aa14.63□□□□□ -0.07
LHX3-202ENST00000371748 SUMO2P61956 95 aaKnown RBP14.63□□□□□ -0.07
LHX3-202ENST00000371748 K7EMI3 77 aa14.62□□□□□ -0.07
LHX3-202ENST00000371748 MAPKAPK5-AS1Q8N8E1 139 aa14.62□□□□□ -0.07
LHX3-202ENST00000371748 C16orf95Q9H693 158 aa14.62□□□□□ -0.07
LHX3-202ENST00000371748 ZNF418Q8TF45 676 aaPredicted RBP14.62□□□□□ -0.07
LHX3-202ENST00000371748 SCGB2A2Q13296 93 aa14.61□□□□□ -0.07
LHX3-202ENST00000371748 POM121L12Q8N7R1 296 aa14.61□□□□□ -0.07
LHX3-202ENST00000371748 TSSC4Q9Y5U2 329 aaPredicted RBP14.61□□□□□ -0.07
LHX3-202ENST00000371748 TEX48A0A1B0GUV7 120 aa14.6□□□□□ -0.07
LHX3-202ENST00000371748 HTN1P15515 57 aa14.6□□□□□ -0.07
LHX3-202ENST00000371748 HILS1P60008 231 aa14.6□□□□□ -0.07
LHX3-202ENST00000371748 C20orf78Q9BR46 151 aa14.6□□□□□ -0.07
LHX3-202ENST00000371748 A8MTW9 85 aa14.6□□□□□ -0.07
LHX3-202ENST00000371748 ZNF256Q9Y2P7 627 aaPredicted RBP14.6□□□□□ -0.07
LHX3-202ENST00000371748 A0A087WX48 190 aa14.59□□□□□ -0.07
LHX3-202ENST00000371748 E9PLD3 99 aa14.59□□□□□ -0.07
LHX3-202ENST00000371748 FAM74A4Q5TZK3 123 aa14.59□□□□□ -0.07
LHX3-202ENST00000371748 HIVEP2P31629 2446 aa14.59□□□□□ -0.07
LHX3-202ENST00000371748 RPL24P83731 157 aaKnown RBP14.59□□□□□ -0.07
LHX3-202ENST00000371748 SUMO4Q6EEV6 95 aa14.59□□□□□ -0.07
LHX3-202ENST00000371748 SPAG8Q99932 426 aaPredicted RBP14.59□□□□□ -0.07
LHX3-202ENST00000371748 F5H697 171 aa14.58□□□□□ -0.08
LHX3-202ENST00000371748 IGLL5B9A064 214 aa14.57□□□□□ -0.08
LHX3-202ENST00000371748 PRM2P04554 102 aa14.57□□□□□ -0.08
LHX3-202ENST00000371748 SYT8Q8NBV8 401 aa14.57□□□□□ -0.08
LHX3-202ENST00000371748 TRGV11A0A075B6L2 103 aa14.56□□□□□ -0.08
LHX3-202ENST00000371748 LY6G6DO95868 133 aa14.56□□□□□ -0.08
LHX3-202ENST00000371748 NOTCH2Q04721 2471 aa14.56□□□□□ -0.08
LHX3-202ENST00000371748 TAL2Q16559 108 aa14.55□□□□□ -0.08
LHX3-202ENST00000371748 ODF3L2Q3SX64 289 aa14.55□□□□□ -0.08
LHX3-202ENST00000371748 PPP1R17O96001 155 aa14.55□□□□□ -0.08
LHX3-202ENST00000371748 PLNP26678 52 aa14.55□□□□□ -0.08
LHX3-202ENST00000371748 ZNF876PQ49A33 203 aa14.55□□□□□ -0.08
LHX3-202ENST00000371748 ORMDL2Q53FV1 153 aa14.55□□□□□ -0.08
LHX3-202ENST00000371748 C12orf74Q32Q52 190 aa14.54□□□□□ -0.08
LHX3-202ENST00000371748 DEFB104AQ8WTQ1 72 aa14.54□□□□□ -0.08
LHX3-202ENST00000371748 CRYGDP07320 174 aa14.54□□□□□ -0.08
LHX3-202ENST00000371748 ZNF479Q96JC4 524 aa14.54□□□□□ -0.08
LHX3-202ENST00000371748 TRAV25A0A0B4J276 109 aa14.53□□□□□ -0.08
LHX3-202ENST00000371748 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.53□□□□□ -0.08
LHX3-202ENST00000371748 ZNF56Q15929 161 aa14.53□□□□□ -0.08
LHX3-202ENST00000371748 WFDC2Q14508 124 aa14.53□□□□□ -0.08
LHX3-202ENST00000371748 SETXQ7Z333 2677 aaKnown RBP14.53□□□□□ -0.08
LHX3-202ENST00000371748 OTOGQ6ZRI0 2925 aa14.52□□□□□ -0.08
LHX3-202ENST00000371748 TRAV12-1A0A0B4J245 112 aa14.52□□□□□ -0.08
LHX3-202ENST00000371748 F8VRH5 84 aa14.52□□□□□ -0.08
LHX3-202ENST00000371748 F8W1H4 67 aa14.52□□□□□ -0.08
LHX3-202ENST00000371748 NIPBLQ6KC79 2804 aaeCLIP14.52□□□□□ -0.08
LHX3-202ENST00000371748 NSUN5P1Q3KNT7 163 aa14.52□□□□□ -0.09
LHX3-202ENST00000371748 HIST1H4GQ99525 98 aa14.52□□□□□ -0.09
LHX3-202ENST00000371748 SPANXB1Q9NS25 103 aaPredicted RBP14.52□□□□□ -0.09
LHX3-202ENST00000371748 TRBV7-3A0A075B6L6 115 aa14.51□□□□□ -0.09
LHX3-202ENST00000371748 H7C1H1 209 aa14.51□□□□□ -0.09
LHX3-202ENST00000371748 TOMM6Q96B49 74 aa14.51□□□□□ -0.09
LHX3-202ENST00000371748 H3BMG7 143 aa14.51□□□□□ -0.09
LHX3-202ENST00000371748 PROK1P58294 105 aa14.51□□□□□ -0.09
LHX3-202ENST00000371748 ADARB2-AS1A8MUL3 147 aa14.5□□□□□ -0.09
LHX3-202ENST00000371748 NDUFA7O95182 113 aa14.5□□□□□ -0.09
LHX3-202ENST00000371748 POLR2KP53803 58 aaKnown RBP14.5□□□□□ -0.09
LHX3-202ENST00000371748 C2orf66Q6UXQ4 117 aa14.49□□□□□ -0.09
LHX3-202ENST00000371748 SCGB3A1Q96QR1 104 aa14.49□□□□□ -0.09
LHX3-202ENST00000371748 MORN3Q6PF18 240 aaPredicted RBP14.49□□□□□ -0.09
LHX3-202ENST00000371748 LINC01587Q99440 93 aa14.49□□□□□ -0.09
LHX3-202ENST00000371748 A0A1B0GWB2 263 aa14.48□□□□□ -0.09
LHX3-202ENST00000371748 SDHAF1A6NFY7 115 aa14.48□□□□□ -0.09
LHX3-202ENST00000371748 OR11H12B2RN74 326 aa14.48□□□□□ -0.09
LHX3-202ENST00000371748 M0QY20 66 aa14.48□□□□□ -0.09
LHX3-202ENST00000371748 STHQ8IWL8 128 aa14.48□□□□□ -0.09
LHX3-202ENST00000371748 NEXN-AS1Q8NBZ9 246 aa14.48□□□□□ -0.09
LHX3-202ENST00000371748 XCL2Q9UBD3 114 aa14.48□□□□□ -0.09
LHX3-202ENST00000371748 INSP01308 110 aa14.48□□□□□ -0.09
LHX3-202ENST00000371748 CHTOPQ9Y3Y2 248 aaKnown RBP14.48□□□□□ -0.09
LHX3-202ENST00000371748 MYMXA0A1B0GTQ4 84 aa14.47□□□□□ -0.09
LHX3-202ENST00000371748 RPL32P62910 135 aaKnown RBP14.47□□□□□ -0.09
LHX3-202ENST00000371748 RRN3P1Q2M238 152 aa14.47□□□□□ -0.09
LHX3-202ENST00000371748 OR11H2Q8NH07 326 aa14.47□□□□□ -0.09
LHX3-202ENST00000371748 IGHV3-73A0A0B4J1V6 119 aa14.47□□□□□ -0.09
LHX3-202ENST00000371748 VCYO14598 125 aa14.46□□□□□ -0.09
LHX3-202ENST00000371748 SH2D6Q7Z4S9 175 aa14.46□□□□□ -0.09
LHX3-202ENST00000371748 ZNF415Q09FC8 603 aa14.46□□□□□ -0.1
LHX3-202ENST00000371748 ETDBQ3ZM63 59 aa14.46□□□□□ -0.1
LHX3-202ENST00000371748 GTSF1LQ9H1H1 148 aa14.46□□□□□ -0.1
LHX3-202ENST00000371748 PRO0461Q9UI25 63 aa14.46□□□□□ -0.1
LHX3-202ENST00000371748 TRBV6-5A0A0K0K1A5 114 aa14.45□□□□□ -0.1
LHX3-202ENST00000371748 INAFM1C9JVW0 142 aa14.45□□□□□ -0.1
LHX3-202ENST00000371748 AZU1P20160 251 aa14.45□□□□□ -0.1
LHX3-202ENST00000371748 KRTAP10-3P60369 221 aa14.45□□□□□ -0.1
LHX3-202ENST00000371748 ZFP2Q6ZN57 461 aa14.45□□□□□ -0.1
LHX3-202ENST00000371748 KIR2DL4Q99706 377 aa14.45□□□□□ -0.1
LHX3-202ENST00000371748 NACAE9PAV3 2078 aa14.44□□□□□ -0.1
LHX3-202ENST00000371748 M0R2P5 195 aa14.44□□□□□ -0.1
LHX3-202ENST00000371748 TRPT1Q86TN4 253 aaKnown RBP14.44□□□□□ -0.1
LHX3-202ENST00000371748 CYSLTR1Q9Y271 337 aa14.44□□□□□ -0.1
LHX3-202ENST00000371748 TRBV27A0A0K0K1C4 114 aa14.44□□□□□ -0.1
LHX3-202ENST00000371748 MTURNQ8N3F0 131 aa14.44□□□□□ -0.1
LHX3-202ENST00000371748 C11orf72Q8NBR9 251 aa14.44□□□□□ -0.1
LHX3-202ENST00000371748 BAALCQ8WXS3 180 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms