RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 POLR2KP53803 58 aaKnown RBP9.19□□□□□ -0.94
PHGDH-201ENST00000369407 SBSPONQ8IVN8 264 aa9.19□□□□□ -0.94
PHGDH-201ENST00000369407 IGHV3-33P01772 117 aa9.19□□□□□ -0.94
PHGDH-201ENST00000369407 TRAV12-2A0A075B6T6 113 aa9.18□□□□□ -0.94
PHGDH-201ENST00000369407 BRD3OSQ6XYD6 125 aa9.18□□□□□ -0.94
PHGDH-201ENST00000369407 Q6ZSV7 163 aa9.18□□□□□ -0.94
PHGDH-201ENST00000369407 CSDC2Q9Y534 153 aaKnown RBP9.18□□□□□ -0.94
PHGDH-201ENST00000369407 VCYO14598 125 aa9.18□□□□□ -0.94
PHGDH-201ENST00000369407 OVOL1O14753 267 aa9.18□□□□□ -0.94
PHGDH-201ENST00000369407 LY6EQ16553 131 aa9.18□□□□□ -0.94
PHGDH-201ENST00000369407 ZNF876PQ49A33 203 aa9.18□□□□□ -0.94
PHGDH-201ENST00000369407 Q8N1Y9 231 aa9.18□□□□□ -0.94
PHGDH-201ENST00000369407 C5orf56Q8N8D9 126 aa9.18□□□□□ -0.94
PHGDH-201ENST00000369407 CREBBPQ92793 2442 aa9.18□□□□□ -0.94
PHGDH-201ENST00000369407 A0A0J9YXV3 536 aa9.18□□□□□ -0.94
PHGDH-201ENST00000369407 A0A1W2PPR1 153 aa9.18□□□□□ -0.94
PHGDH-201ENST00000369407 SOCS3O14543 225 aa9.18□□□□□ -0.94
PHGDH-201ENST00000369407 RNASE13Q5GAN3 156 aaKnown RBP9.18□□□□□ -0.94
PHGDH-201ENST00000369407 EDA2RQ9HAV5 297 aa9.18□□□□□ -0.94
PHGDH-201ENST00000369407 PRSS2P07478 247 aa9.17□□□□□ -0.94
PHGDH-201ENST00000369407 TMEM263Q8WUH6 116 aaKnown RBP9.17□□□□□ -0.94
PHGDH-201ENST00000369407 LENEPQ9Y5L5 61 aa9.17□□□□□ -0.94
PHGDH-201ENST00000369407 C9orf153Q5TBE3 101 aa9.17□□□□□ -0.94
PHGDH-201ENST00000369407 MDFICQ9P1T7 246 aa9.17□□□□□ -0.94
PHGDH-201ENST00000369407 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.17□□□□□ -0.941e-7■■□□□ 12.3
PHGDH-201ENST00000369407 UBE2E1P51965 193 aa9.16□□□□□ -0.94
PHGDH-201ENST00000369407 PAPPA-AS1Q5QFB9 102 aa9.16□□□□□ -0.94
PHGDH-201ENST00000369407 DUX3Q96PT4 197 aa9.16□□□□□ -0.94
PHGDH-201ENST00000369407 VCX2Q9H322 139 aa9.16□□□□□ -0.94
PHGDH-201ENST00000369407 SPXQ9BT56 116 aa9.16□□□□□ -0.94
PHGDH-201ENST00000369407 RHPN1-AS1Q9BWJ2 59 aa9.16□□□□□ -0.94
PHGDH-201ENST00000369407 CSMD2Q7Z408 3487 aa9.16□□□□□ -0.94
PHGDH-201ENST00000369407 IGHV1-69DA0A0B4J2H0 117 aa9.16□□□□□ -0.94
PHGDH-201ENST00000369407 A8MZ25 164 aa9.16□□□□□ -0.94
PHGDH-201ENST00000369407 C11orf71Q6IPW1 123 aa9.16□□□□□ -0.94
PHGDH-201ENST00000369407 KLK9Q9UKQ9 250 aa9.16□□□□□ -0.94
PHGDH-201ENST00000369407 FAM236AA0A1B0GUQ0 79 aa9.15□□□□□ -0.94
PHGDH-201ENST00000369407 FAM236BA0A1B0GV22 79 aa9.15□□□□□ -0.94
PHGDH-201ENST00000369407 PPP1R17O96001 155 aa9.15□□□□□ -0.94
PHGDH-201ENST00000369407 CEMP1Q6PRD7 247 aaPredicted RBP9.15□□□□□ -0.94
PHGDH-201ENST00000369407 TMEM141Q96I45 108 aa9.15□□□□□ -0.94
PHGDH-201ENST00000369407 IGHV3-73A0A0B4J1V6 119 aa9.15□□□□□ -0.95
PHGDH-201ENST00000369407 NPFFO15130 113 aa9.15□□□□□ -0.95
PHGDH-201ENST00000369407 TRAV8-3A0A0A6YYJ7 113 aa9.14□□□□□ -0.95
PHGDH-201ENST00000369407 LINC01620Q4KN68 170 aa9.14□□□□□ -0.95
PHGDH-201ENST00000369407 TIMM17AQ99595 171 aa9.14□□□□□ -0.95
PHGDH-201ENST00000369407 IGHV4OR15-8A0A075B7B6 117 aa9.14□□□□□ -0.95
PHGDH-201ENST00000369407 A0A087WW49 117 aa9.14□□□□□ -0.95
PHGDH-201ENST00000369407 TMEM223A0PJW6 202 aa9.14□□□□□ -0.95
PHGDH-201ENST00000369407 P0DMU3 169 aa9.14□□□□□ -0.95
PHGDH-201ENST00000369407 FAM231AP0DMU4 169 aa9.14□□□□□ -0.95
PHGDH-201ENST00000369407 FAM231CP0DMU5 169 aa9.14□□□□□ -0.95
PHGDH-201ENST00000369407 ZNF22P17026 224 aaPredicted RBP9.14□□□□□ -0.95
PHGDH-201ENST00000369407 FAM19A4Q96LR4 140 aa9.14□□□□□ -0.95
PHGDH-201ENST00000369407 BPESC1Q9GZL8 116 aa9.14□□□□□ -0.95
PHGDH-201ENST00000369407 CENPEQ02224 2701 aa9.14□□□□□ -0.95
PHGDH-201ENST00000369407 RS1O15537 224 aa9.14□□□□□ -0.95
PHGDH-201ENST00000369407 TRIAP1O43715 76 aa9.14□□□□□ -0.95
PHGDH-201ENST00000369407 HTN1P15515 57 aa9.14□□□□□ -0.95
PHGDH-201ENST00000369407 C5orf47Q569G3 176 aa9.13□□□□□ -0.95
PHGDH-201ENST00000369407 TRGV11A0A075B6L2 103 aa9.12□□□□□ -0.95
PHGDH-201ENST00000369407 LEPROTO15243 131 aa9.12□□□□□ -0.95
PHGDH-201ENST00000369407 CLEC2BQ92478 149 aa9.12□□□□□ -0.95
PHGDH-201ENST00000369407 ODF3Q96PU9 254 aa9.12□□□□□ -0.95
PHGDH-201ENST00000369407 HIVEP3Q5T1R4 2406 aa9.12□□□□□ -0.95
PHGDH-201ENST00000369407 CACNA1AO00555 2505 aa9.12□□□□□ -0.95
PHGDH-201ENST00000369407 TRBV27A0A0K0K1C4 114 aa9.12□□□□□ -0.95
PHGDH-201ENST00000369407 ADORA2A-AS1P86434 159 aa9.12□□□□□ -0.95
PHGDH-201ENST00000369407 A0A0J9YXY3 114 aa9.12□□□□□ -0.95
PHGDH-201ENST00000369407 NDUFA4O00483 81 aa9.12□□□□□ -0.95
PHGDH-201ENST00000369407 ATXN8Q156A1 80 aa9.12□□□□□ -0.95
PHGDH-201ENST00000369407 FAM19A5Q7Z5A7 132 aaPredicted RBP9.12□□□□□ -0.95
PHGDH-201ENST00000369407 NOTCH3Q9UM47 2321 aa9.11□□□□□ -0.95
PHGDH-201ENST00000369407 MED14OSP0DP75 135 aa9.11□□□□□ -0.95
PHGDH-201ENST00000369407 BLCAPP62952 87 aa9.11□□□□□ -0.95
PHGDH-201ENST00000369407 ADAMTSL4-AS1Q5T5F5 129 aa9.11□□□□□ -0.95
PHGDH-201ENST00000369407 POM121L12Q8N7R1 296 aa9.11□□□□□ -0.95
PHGDH-201ENST00000369407 SMIM9A6NGZ8 99 aa9.11□□□□□ -0.95
PHGDH-201ENST00000369407 FAM223BA6NKX1 122 aa9.11□□□□□ -0.95
PHGDH-201ENST00000369407 M0QY20 66 aa9.11□□□□□ -0.95
PHGDH-201ENST00000369407 NXPH4O95158 308 aa9.11□□□□□ -0.95
PHGDH-201ENST00000369407 FAM223AQ8IWN6 122 aa9.11□□□□□ -0.95
PHGDH-201ENST00000369407 DAND5Q8N907 189 aa9.11□□□□□ -0.95
PHGDH-201ENST00000369407 CSPG4Q6UVK1 2322 aa9.11□□□□□ -0.95
PHGDH-201ENST00000369407 PRM2P04554 102 aa9.1□□□□□ -0.95
PHGDH-201ENST00000369407 PROK1P58294 105 aa9.1□□□□□ -0.95
PHGDH-201ENST00000369407 KLK9Q2XQG4 91 aa9.1□□□□□ -0.95
PHGDH-201ENST00000369407 C2orf82Q6UX34 121 aa9.1□□□□□ -0.95
PHGDH-201ENST00000369407 MOB4Q9Y3A3 225 aa9.1□□□□□ -0.95
PHGDH-201ENST00000369407 PRRC2AP48634 2157 aaKnown RBP9.1□□□□□ -0.95
PHGDH-201ENST00000369407 KLLNB2CW77 178 aa9.1□□□□□ -0.95
PHGDH-201ENST00000369407 CELSR2Q9HCU4 2923 aa9.1□□□□□ -0.95
PHGDH-201ENST00000369407 ZFYVE26Q68DK2 2539 aa9.1□□□□□ -0.95
PHGDH-201ENST00000369407 IGHV3-30-3P0DP02 117 aa9.1□□□□□ -0.95
PHGDH-201ENST00000369407 SPINK13Q1W4C9 94 aa9.1□□□□□ -0.95
PHGDH-201ENST00000369407 Q9UF83 564 aa9.1□□□□□ -0.95
PHGDH-201ENST00000369407 IGLV4-3A0A075B6K6 122 aa9.09□□□□□ -0.95
PHGDH-201ENST00000369407 A0A0B4J2C4 111 aa9.09□□□□□ -0.95
PHGDH-201ENST00000369407 H3BMM0 161 aa9.09□□□□□ -0.95
PHGDH-201ENST00000369407 HERVK_113P63121 156 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms