RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 KIR2DL5BA0A0G2JPC4 375 aa7.15□□□□□ -1.27
TPM3-210ENST00000368530 PPBPP02775 128 aa7.15□□□□□ -1.27
TPM3-210ENST00000368530 SMIM17P0DL12 118 aa7.15□□□□□ -1.27
TPM3-210ENST00000368530 KIR2DL5AQ8N109 375 aa7.15□□□□□ -1.27
TPM3-210ENST00000368530 SYT8Q8NBV8 401 aa7.15□□□□□ -1.27
TPM3-210ENST00000368530 KIR2DL5BQ8NHK3 375 aa7.15□□□□□ -1.27
TPM3-210ENST00000368530 CLUHP3Q96NS8 147 aa7.15□□□□□ -1.27
TPM3-210ENST00000368530 MAP1LC3AQ9H492 121 aa7.15□□□□□ -1.27
TPM3-210ENST00000368530 KIAA1109Q2LD37 5005 aa7.15□□□□□ -1.27
TPM3-210ENST00000368530 APOC4P55056 127 aa7.14□□□□□ -1.27
TPM3-210ENST00000368530 NUTF2P61970 127 aaKnown RBP7.14□□□□□ -1.27
TPM3-210ENST00000368530 ZNF415Q09FC8 603 aa7.14□□□□□ -1.27
TPM3-210ENST00000368530 ZNF876PQ49A33 203 aa7.14□□□□□ -1.27
TPM3-210ENST00000368530 FAM74A4Q5TZK3 123 aa7.14□□□□□ -1.27
TPM3-210ENST00000368530 LGALS9CQ6DKI2 356 aa7.14□□□□□ -1.27
TPM3-210ENST00000368530 C1orf158Q8N1D5 194 aa7.14□□□□□ -1.27
TPM3-210ENST00000368530 GSN-AS1Q9NRJ2 163 aa7.14□□□□□ -1.27
TPM3-210ENST00000368530 AP5S1Q9NUS5 200 aa7.14□□□□□ -1.27
TPM3-210ENST00000368530 F5H697 171 aa7.13□□□□□ -1.27
TPM3-210ENST00000368530 LINC00173Q6ZV60 143 aa7.13□□□□□ -1.27
TPM3-210ENST00000368530 NRACQ8N912 160 aa7.13□□□□□ -1.27
TPM3-210ENST00000368530 PHLDA1Q8WV24 401 aaPredicted RBP7.13□□□□□ -1.27
TPM3-210ENST00000368530 RPL39LQ96EH5 51 aaKnown RBP7.13□□□□□ -1.27
TPM3-210ENST00000368530 MRAP2Q96G30 205 aa7.13□□□□□ -1.27
TPM3-210ENST00000368530 KLK5Q9Y337 293 aaPredicted RBP7.13□□□□□ -1.27
TPM3-210ENST00000368530 KIF25-AS1Q9Y6Z4 181 aa7.13□□□□□ -1.27
TPM3-210ENST00000368530 C3orf79P0CE67 100 aa7.12□□□□□ -1.27
TPM3-210ENST00000368530 AZU1P20160 251 aa7.12□□□□□ -1.27
TPM3-210ENST00000368530 C20orf144Q9BQM9 153 aa7.12□□□□□ -1.27
TPM3-210ENST00000368530 LAMTOR2Q9Y2Q5 125 aa7.12□□□□□ -1.27
TPM3-210ENST00000368530 NACAE9PAV3 2078 aa7.12□□□□□ -1.27
TPM3-210ENST00000368530 LEPROTL1O95214 131 aa7.11□□□□□ -1.27
TPM3-210ENST00000368530 GIG44P09565 113 aaPredicted RBP7.11□□□□□ -1.27
TPM3-210ENST00000368530 LINC00315P59091 139 aa7.11□□□□□ -1.27
TPM3-210ENST00000368530 ZNF56Q15929 161 aa7.11□□□□□ -1.27
TPM3-210ENST00000368530 SUMO4Q6EEV6 95 aa7.11□□□□□ -1.27
TPM3-210ENST00000368530 RASL10AQ92737 203 aa7.11□□□□□ -1.27
TPM3-210ENST00000368530 MRPL16Q9NX20 251 aaKnown RBP7.11□□□□□ -1.27
TPM3-210ENST00000368530 IGHV3-73A0A0B4J1V6 119 aa7.11□□□□□ -1.27
TPM3-210ENST00000368530 M0R2P5 195 aa7.11□□□□□ -1.27
TPM3-210ENST00000368530 Q8N8P6 123 aa7.11□□□□□ -1.27
TPM3-210ENST00000368530 C11orf72Q8NBR9 251 aa7.11□□□□□ -1.27
TPM3-210ENST00000368530 LINC00467Q9BRT7 94 aa7.11□□□□□ -1.27
TPM3-210ENST00000368530 H0Y8G0 127 aa7.1□□□□□ -1.27
TPM3-210ENST00000368530 TCAPO15273 167 aa7.1□□□□□ -1.27
TPM3-210ENST00000368530 CRYGDP07320 174 aa7.1□□□□□ -1.27
TPM3-210ENST00000368530 MORN3Q6PF18 240 aaPredicted RBP7.1□□□□□ -1.27
TPM3-210ENST00000368530 NXT2Q9NPJ8 142 aaKnown RBP7.1□□□□□ -1.27
TPM3-210ENST00000368530 GOLT1BQ9Y3E0 138 aa7.1□□□□□ -1.27
TPM3-210ENST00000368530 DNAH6Q9C0G6 4158 aa7.1□□□□□ -1.27
TPM3-210ENST00000368530 FAT2Q9NYQ8 4349 aa7.09□□□□□ -1.27
TPM3-210ENST00000368530 A0A096LNJ9 63 aa7.09□□□□□ -1.27
TPM3-210ENST00000368530 HBDP02042 147 aa7.09□□□□□ -1.27
TPM3-210ENST00000368530 BTF3P20290 206 aaKnown RBP7.09□□□□□ -1.27
TPM3-210ENST00000368530 NANOS2P60321 138 aaKnown RBP7.09□□□□□ -1.27
TPM3-210ENST00000368530 NEGR1Q7Z3B1 354 aa7.09□□□□□ -1.27
TPM3-210ENST00000368530 SPATA12Q7Z6I5 190 aa7.09□□□□□ -1.27
TPM3-210ENST00000368530 POM121L12Q8N7R1 296 aa7.09□□□□□ -1.27
TPM3-210ENST00000368530 Q8N976 141 aa7.09□□□□□ -1.27
TPM3-210ENST00000368530 DEFB104AQ8WTQ1 72 aa7.09□□□□□ -1.27
TPM3-210ENST00000368530 SMIM2Q9BVW6 85 aa7.09□□□□□ -1.27
TPM3-210ENST00000368530 CSTL1Q9H114 145 aa7.09□□□□□ -1.27
TPM3-210ENST00000368530 PRO1933Q9H354 126 aa7.09□□□□□ -1.27
TPM3-210ENST00000368530 IGLV2-18A0A075B6J9 118 aa7.08□□□□□ -1.28
TPM3-210ENST00000368530 SUMO2P61956 95 aaKnown RBP7.08□□□□□ -1.28
TPM3-210ENST00000368530 S100A12P80511 92 aa7.08□□□□□ -1.28
TPM3-210ENST00000368530 SPXQ9BT56 116 aa7.08□□□□□ -1.28
TPM3-210ENST00000368530 TMEM70Q9BUB7 260 aa7.08□□□□□ -1.28
TPM3-210ENST00000368530 C1QTNF4Q9BXJ3 329 aa7.08□□□□□ -1.28
TPM3-210ENST00000368530 C11orf68Q9H3H3 251 aaKnown RBP7.08□□□□□ -1.28
TPM3-210ENST00000368530 HSPB8Q9UJY1 196 aa7.08□□□□□ -1.28
TPM3-210ENST00000368530 DNAH2Q9P225 4427 aa7.08□□□□□ -1.28
TPM3-210ENST00000368530 TRGV1A0A0A0MS02 117 aa7.07□□□□□ -1.28
TPM3-210ENST00000368530 PRSS47A8MTI9 375 aa7.07□□□□□ -1.28
TPM3-210ENST00000368530 ATOH7Q8N100 152 aa7.07□□□□□ -1.28
TPM3-210ENST00000368530 CSNK1G2-AS1Q8NCQ2 148 aa7.07□□□□□ -1.28
TPM3-210ENST00000368530 C11orf45Q8TAV5 145 aa7.07□□□□□ -1.28
TPM3-210ENST00000368530 RNASE8Q8TDE3 154 aaKnown RBP7.07□□□□□ -1.28
TPM3-210ENST00000368530 C20orf78Q9BR46 151 aa7.07□□□□□ -1.28
TPM3-210ENST00000368530 ST20Q9HBF5 79 aa7.07□□□□□ -1.28
TPM3-210ENST00000368530 APLNQ9ULZ1 77 aa7.07□□□□□ -1.28
TPM3-210ENST00000368530 LINC01546A6NGU7 62 aa7.06□□□□□ -1.28
TPM3-210ENST00000368530 A8MWV9 139 aa7.06□□□□□ -1.28
TPM3-210ENST00000368530 SYS1-DBNDD2H3BUS1 97 aa7.06□□□□□ -1.28
TPM3-210ENST00000368530 FCER1GP30273 86 aa7.06□□□□□ -1.28
TPM3-210ENST00000368530 LAGE3Q14657 143 aa7.06□□□□□ -1.28
TPM3-210ENST00000368530 CFAP126Q5VTH2 177 aa7.06□□□□□ -1.28
TPM3-210ENST00000368530 OR11H2Q8NH07 326 aa7.06□□□□□ -1.28
TPM3-210ENST00000368530 TMEM263Q8WUH6 116 aaKnown RBP7.06□□□□□ -1.28
TPM3-210ENST00000368530 C18orf15Q96N68 181 aa7.06□□□□□ -1.28
TPM3-210ENST00000368530 MAP1LC3CQ9BXW4 147 aa7.06□□□□□ -1.28
TPM3-210ENST00000368530 DNAH17Q9UFH2 4485 aa7.06□□□□□ -1.28
TPM3-210ENST00000368530 M0QY20 66 aa7.06□□□□□ -1.28
TPM3-210ENST00000368530 NUDT3O95989 172 aa7.06□□□□□ -1.28
TPM3-210ENST00000368530 PPP1R17O96001 155 aa7.06□□□□□ -1.28
TPM3-210ENST00000368530 P0DMU3 169 aa7.06□□□□□ -1.28
TPM3-210ENST00000368530 FAM231AP0DMU4 169 aa7.06□□□□□ -1.28
TPM3-210ENST00000368530 FAM231CP0DMU5 169 aa7.06□□□□□ -1.28
TPM3-210ENST00000368530 RRN3P1Q2M238 152 aa7.06□□□□□ -1.28
TPM3-210ENST00000368530 TEX43Q6ZNM6 134 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms