RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 TRGV1A0A0A0MS02 117 aa10.17□□□□□ -0.78
SHC1-202ENST00000368445 IGHV3-38A0A0C4DH36 116 aa10.17□□□□□ -0.78
SHC1-202ENST00000368445 ZFP2Q6ZN57 461 aa10.17□□□□□ -0.78
SHC1-202ENST00000368445 MRPL52Q86TS9 123 aaKnown RBP10.17□□□□□ -0.78
SHC1-202ENST00000368445 ODF3Q96PU9 254 aa10.17□□□□□ -0.78
SHC1-202ENST00000368445 OPRPNQ99935 248 aaPredicted RBP10.17□□□□□ -0.78
SHC1-202ENST00000368445 PDZD2O15018 2839 aa10.17□□□□□ -0.78
SHC1-202ENST00000368445 DLEU1O43261 78 aa10.17□□□□□ -0.78
SHC1-202ENST00000368445 ZNF415Q09FC8 603 aa10.17□□□□□ -0.78
SHC1-202ENST00000368445 SCGB1D4Q6XE38 83 aa10.17□□□□□ -0.78
SHC1-202ENST00000368445 OR11H2Q8NH07 326 aa10.17□□□□□ -0.78
SHC1-202ENST00000368445 K7EMI3 77 aa10.16□□□□□ -0.78
SHC1-202ENST00000368445 CRYGDP07320 174 aa10.16□□□□□ -0.78
SHC1-202ENST00000368445 F8VRH5 84 aa10.16□□□□□ -0.78
SHC1-202ENST00000368445 C9orf85Q96MD7 179 aa10.16□□□□□ -0.78
SHC1-202ENST00000368445 IGHV3-64A0A075B6Q5 118 aa10.15□□□□□ -0.78
SHC1-202ENST00000368445 LINC00315P59091 139 aa10.15□□□□□ -0.78
SHC1-202ENST00000368445 ODF3L2Q3SX64 289 aa10.15□□□□□ -0.78
SHC1-202ENST00000368445 KIF25-AS1Q9Y6Z4 181 aa10.15□□□□□ -0.78
SHC1-202ENST00000368445 LY6G6DO95868 133 aa10.15□□□□□ -0.78
SHC1-202ENST00000368445 TRPT1Q86TN4 253 aaKnown RBP10.15□□□□□ -0.78
SHC1-202ENST00000368445 TOMM6Q96B49 74 aa10.15□□□□□ -0.78
SHC1-202ENST00000368445 INAFM1C9JVW0 142 aa10.15□□□□□ -0.79
SHC1-202ENST00000368445 RIPPLY3P57055 190 aa10.15□□□□□ -0.79
SHC1-202ENST00000368445 RNASE13Q5GAN3 156 aaKnown RBP10.15□□□□□ -0.79
SHC1-202ENST00000368445 PLNP26678 52 aa10.14□□□□□ -0.79
SHC1-202ENST00000368445 BAALCQ8WXS3 180 aa10.14□□□□□ -0.79
SHC1-202ENST00000368445 M0QY20 66 aa10.14□□□□□ -0.79
SHC1-202ENST00000368445 M0R2P5 195 aa10.14□□□□□ -0.79
SHC1-202ENST00000368445 KRTAP1-1Q07627 177 aa10.14□□□□□ -0.79
SHC1-202ENST00000368445 HHLA3Q9XRX5 114 aa10.14□□□□□ -0.79
SHC1-202ENST00000368445 COX11Q9Y6N1 276 aa10.14□□□□□ -0.79
SHC1-202ENST00000368445 RNASE1P07998 156 aaKnown RBP10.13□□□□□ -0.79
SHC1-202ENST00000368445 AZU1P20160 251 aa10.13□□□□□ -0.79
SHC1-202ENST00000368445 C2orf91Q6ZV80 131 aa10.13□□□□□ -0.79
SHC1-202ENST00000368445 BOD1L2Q8IYS8 172 aa10.13□□□□□ -0.79
SHC1-202ENST00000368445 OR4C5Q8NGB2 326 aa10.13□□□□□ -0.79
SHC1-202ENST00000368445 HIST1H4GQ99525 98 aa10.13□□□□□ -0.79
SHC1-202ENST00000368445 K7EP13 123 aa10.13□□□□□ -0.79
SHC1-202ENST00000368445 ORAOV1Q8WV07 137 aa10.13□□□□□ -0.79
SHC1-202ENST00000368445 KMT2BQ9UMN6 2715 aaPredicted RBP10.13□□□□□ -0.79
SHC1-202ENST00000368445 A6NDN8 102 aa10.13□□□□□ -0.79
SHC1-202ENST00000368445 POLR2KP53803 58 aaKnown RBP10.12□□□□□ -0.79
SHC1-202ENST00000368445 DGAT2L7PQ6IED9 249 aa10.12□□□□□ -0.79
SHC1-202ENST00000368445 Q9UF83 564 aa10.12□□□□□ -0.79
SHC1-202ENST00000368445 AMMECR1LQ6DCA0 310 aa10.12□□□□□ -0.79
SHC1-202ENST00000368445 I3L3M4 83 aa10.11□□□□□ -0.79
SHC1-202ENST00000368445 SRSF9Q13242 221 aaKnown RBP eCLIP10.11□□□□□ -0.79
SHC1-202ENST00000368445 CEMP1Q6PRD7 247 aaPredicted RBP10.11□□□□□ -0.79
SHC1-202ENST00000368445 VCX2Q9H322 139 aa10.11□□□□□ -0.79
SHC1-202ENST00000368445 TRBV25-1A0A075B6N4 114 aa10.11□□□□□ -0.79
SHC1-202ENST00000368445 TRGV2A0A075B6R0 118 aa10.11□□□□□ -0.79
SHC1-202ENST00000368445 HILS1P60008 231 aa10.11□□□□□ -0.79
SHC1-202ENST00000368445 CHAC1Q9BUX1 264 aa10.11□□□□□ -0.79
SHC1-202ENST00000368445 A8MWV9 139 aa10.1□□□□□ -0.79
SHC1-202ENST00000368445 H3BUT2 72 aa10.1□□□□□ -0.79
SHC1-202ENST00000368445 NXPH4O95158 308 aa10.1□□□□□ -0.79
SHC1-202ENST00000368445 HIVEP1P15822 2718 aa10.1□□□□□ -0.79
SHC1-202ENST00000368445 HSD52Q0P140 79 aa10.1□□□□□ -0.79
SHC1-202ENST00000368445 NHP2Q9NX24 153 aaKnown RBP10.1□□□□□ -0.79
SHC1-202ENST00000368445 OTOGQ6ZRI0 2925 aa10.1□□□□□ -0.79
SHC1-202ENST00000368445 FGF6P10767 208 aa10.1□□□□□ -0.79
SHC1-202ENST00000368445 MAPKAPK5-AS1Q8N8E1 139 aa10.1□□□□□ -0.79
SHC1-202ENST00000368445 ZNF815PA8K554 130 aa10.1□□□□□ -0.79
SHC1-202ENST00000368445 PMVKQ15126 192 aa10.1□□□□□ -0.79
SHC1-202ENST00000368445 RRN3P1Q2M238 152 aa10.1□□□□□ -0.79
SHC1-202ENST00000368445 NOP10Q9NPE3 64 aaKnown RBP10.1□□□□□ -0.79
SHC1-202ENST00000368445 NEXN-AS1Q8NBZ9 246 aa10.09□□□□□ -0.79
SHC1-202ENST00000368445 PRADC1Q9BSG0 188 aa10.09□□□□□ -0.79
SHC1-202ENST00000368445 HERVK_113P61574 105 aa10.09□□□□□ -0.79
SHC1-202ENST00000368445 LINC01546A6NGU7 62 aa10.08□□□□□ -0.8
SHC1-202ENST00000368445 C11orf86A6NJI1 115 aa10.08□□□□□ -0.8
SHC1-202ENST00000368445 TAX1BP3O14907 124 aa10.08□□□□□ -0.8
SHC1-202ENST00000368445 DEFB125Q8N687 156 aa10.08□□□□□ -0.8
SHC1-202ENST00000368445 ZNRF2Q8NHG8 242 aa10.08□□□□□ -0.8
SHC1-202ENST00000368445 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.08□□□□□ -0.8
SHC1-202ENST00000368445 TRBV27A0A0K0K1C4 114 aa10.08□□□□□ -0.8
SHC1-202ENST00000368445 GAGE12BA1L429 117 aa10.08□□□□□ -0.8
SHC1-202ENST00000368445 IGKV2-29A2NJV5 120 aaPredicted RBP10.08□□□□□ -0.8
SHC1-202ENST00000368445 GAGE7O76087 117 aa10.08□□□□□ -0.8
SHC1-202ENST00000368445 GAGE12FP0CL80 117 aa10.08□□□□□ -0.8
SHC1-202ENST00000368445 GAGE12GP0CL81 117 aa10.08□□□□□ -0.8
SHC1-202ENST00000368445 GAGE12IP0CL82 117 aa10.08□□□□□ -0.8
SHC1-202ENST00000368445 Q6ZSN1 163 aa10.08□□□□□ -0.8
SHC1-202ENST00000368445 K7ERJ3 54 aa10.07□□□□□ -0.8
SHC1-202ENST00000368445 SEC11AP67812 179 aa10.07□□□□□ -0.8
SHC1-202ENST00000368445 MORN3Q6PF18 240 aaPredicted RBP10.07□□□□□ -0.8
SHC1-202ENST00000368445 NSD1Q96L73 2696 aaPredicted RBP10.07□□□□□ -0.8
SHC1-202ENST00000368445 TRAV25A0A0B4J276 109 aa10.07□□□□□ -0.8
SHC1-202ENST00000368445 Q6ZTI0 123 aa10.07□□□□□ -0.8
SHC1-202ENST00000368445 ZMAT4Q9H898 229 aa10.06□□□□□ -0.8
SHC1-202ENST00000368445 TRAV2A0A0B4J234 112 aa10.06□□□□□ -0.8
SHC1-202ENST00000368445 TRAV12-1A0A0B4J245 112 aa10.06□□□□□ -0.8
SHC1-202ENST00000368445 FXYD2P54710 66 aa10.06□□□□□ -0.8
SHC1-202ENST00000368445 COTL1Q14019 142 aa10.06□□□□□ -0.8
SHC1-202ENST00000368445 CFAP126Q5VTH2 177 aa10.06□□□□□ -0.8
SHC1-202ENST00000368445 CST9LQ9H4G1 147 aa10.06□□□□□ -0.8
SHC1-202ENST00000368445 SFTA2Q6UW10 78 aa10.06□□□□□ -0.8
SHC1-202ENST00000368445 SPXQ9BT56 116 aa10.06□□□□□ -0.8
SHC1-202ENST00000368445 GAGE10A6NGK3 116 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms