RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 MGST1P10620 155 aaKnown RBP3.37□□□□□ -1.87
RNU4-4P-201ENST00000364588 RNASE3P12724 160 aaKnown RBP3.37□□□□□ -1.87
RNU4-4P-201ENST00000364588 RPL12P30050 165 aaKnown RBP3.37□□□□□ -1.87
RNU4-4P-201ENST00000364588 KRTAP5-1Q6L8H4 278 aa3.37□□□□□ -1.87
RNU4-4P-201ENST00000364588 PRNTQ86SH4 94 aa3.37□□□□□ -1.87
RNU4-4P-201ENST00000364588 OR10G9Q8NGN4 311 aa3.37□□□□□ -1.87
RNU4-4P-201ENST00000364588 OR10G7Q8NGN6 311 aa3.37□□□□□ -1.87
RNU4-4P-201ENST00000364588 OR2T35Q8NGX2 323 aa3.37□□□□□ -1.87
RNU4-4P-201ENST00000364588 DEFB104AQ8WTQ1 72 aa3.37□□□□□ -1.87
RNU4-4P-201ENST00000364588 DNAJC30Q96LL9 226 aa3.37□□□□□ -1.87
RNU4-4P-201ENST00000364588 SAMD10Q9BYL1 202 aa3.37□□□□□ -1.87
RNU4-4P-201ENST00000364588 JPT2Q9H910 190 aa3.37□□□□□ -1.87
RNU4-4P-201ENST00000364588 PSG8Q9UQ74 426 aa3.37□□□□□ -1.87
RNU4-4P-201ENST00000364588 IGKV2D-24A0A075B6R9 120 aa3.36□□□□□ -1.87
RNU4-4P-201ENST00000364588 GGTLC3B5MD39 225 aa3.36□□□□□ -1.87
RNU4-4P-201ENST00000364588 INMT-MINDY4F8WBC2 141 aa3.36□□□□□ -1.87
RNU4-4P-201ENST00000364588 BCL2L11O43521 198 aa3.36□□□□□ -1.87
RNU4-4P-201ENST00000364588 SSNA1O43805 119 aa3.36□□□□□ -1.87
RNU4-4P-201ENST00000364588 TCRAP04437 139 aa3.36□□□□□ -1.87
RNU4-4P-201ENST00000364588 PET100P0DJ07 73 aa3.36□□□□□ -1.87
RNU4-4P-201ENST00000364588 S100A4P26447 101 aaKnown RBP3.36□□□□□ -1.87
RNU4-4P-201ENST00000364588 GCHFRP30047 84 aa3.36□□□□□ -1.87
RNU4-4P-201ENST00000364588 CDC34P49427 236 aaPredicted RBP3.36□□□□□ -1.87
RNU4-4P-201ENST00000364588 FLI1Q01543 452 aaPredicted RBP3.36□□□□□ -1.87
RNU4-4P-201ENST00000364588 LGALSLQ3ZCW2 172 aaPredicted RBP3.36□□□□□ -1.87
RNU4-4P-201ENST00000364588 SMUG1Q53HV7 270 aa3.36□□□□□ -1.87
RNU4-4P-201ENST00000364588 ARL6IP6Q8N6S5 226 aa3.36□□□□□ -1.87
RNU4-4P-201ENST00000364588 C14orf178Q8N769 122 aaPredicted RBP3.36□□□□□ -1.87
RNU4-4P-201ENST00000364588 C5orf17Q8NAS9 161 aa3.36□□□□□ -1.87
RNU4-4P-201ENST00000364588 PARLQ9H300 379 aa3.36□□□□□ -1.87
RNU4-4P-201ENST00000364588 KLK12Q9UKR0 248 aa3.36□□□□□ -1.87
RNU4-4P-201ENST00000364588 TRAV34A0A0B4J273 112 aa3.35□□□□□ -1.87
RNU4-4P-201ENST00000364588 SERTM2A0A1B0GWG4 89 aa3.35□□□□□ -1.87
RNU4-4P-201ENST00000364588 A8MWV9 139 aa3.35□□□□□ -1.87
RNU4-4P-201ENST00000364588 H3BVH4 76 aa3.35□□□□□ -1.87
RNU4-4P-201ENST00000364588 K7EQM0 130 aa3.35□□□□□ -1.87
RNU4-4P-201ENST00000364588 UPK1BO75841 260 aa3.35□□□□□ -1.87
RNU4-4P-201ENST00000364588 IGLV2-8P01709 118 aa3.35□□□□□ -1.87
RNU4-4P-201ENST00000364588 STAG3L2P0CL84 134 aa3.35□□□□□ -1.87
RNU4-4P-201ENST00000364588 STAG3L3P0CL85 134 aa3.35□□□□□ -1.87
RNU4-4P-201ENST00000364588 LINC00694P0DN24 101 aa3.35□□□□□ -1.87
RNU4-4P-201ENST00000364588 KRTAP10-4P60372 401 aaPredicted RBP3.35□□□□□ -1.87
RNU4-4P-201ENST00000364588 IFITM3Q01628 133 aa3.35□□□□□ -1.87
RNU4-4P-201ENST00000364588 FAM74A4Q5TZK3 123 aa3.35□□□□□ -1.87
RNU4-4P-201ENST00000364588 CYB561D1Q8N8Q1 229 aa3.35□□□□□ -1.87
RNU4-4P-201ENST00000364588 HSD17B11Q8NBQ5 300 aa3.35□□□□□ -1.87
RNU4-4P-201ENST00000364588 CIRBP-AS1Q8TBR5 109 aa3.35□□□□□ -1.87
RNU4-4P-201ENST00000364588 PTH2Q96A98 100 aa3.35□□□□□ -1.87
RNU4-4P-201ENST00000364588 UBE2WQ96B02 151 aa3.35□□□□□ -1.87
RNU4-4P-201ENST00000364588 RMI2Q96E14 147 aa3.35□□□□□ -1.87
RNU4-4P-201ENST00000364588 CHAC1Q9BUX1 264 aa3.35□□□□□ -1.87
RNU4-4P-201ENST00000364588 NDUFA13Q9P0J0 144 aa3.35□□□□□ -1.87
RNU4-4P-201ENST00000364588 EPDR1Q9UM22 224 aa3.35□□□□□ -1.87
RNU4-4P-201ENST00000364588 URGCP-MRPS24S4R325 110 aa3.35□□□□□ -1.87
RNU4-4P-201ENST00000364588 A0A087WWC5 75 aa3.34□□□□□ -1.87
RNU4-4P-201ENST00000364588 RNF222A6NCQ9 220 aa3.34□□□□□ -1.87
RNU4-4P-201ENST00000364588 B4DEV8 164 aa3.34□□□□□ -1.87
RNU4-4P-201ENST00000364588 M0R036 132 aa3.34□□□□□ -1.87
RNU4-4P-201ENST00000364588 ATP6V0CP27449 155 aa3.34□□□□□ -1.87
RNU4-4P-201ENST00000364588 ASIPP42127 132 aa3.34□□□□□ -1.87
RNU4-4P-201ENST00000364588 FGF8P55075 233 aaPredicted RBP3.34□□□□□ -1.87
RNU4-4P-201ENST00000364588 SAPCD1Q5SSQ6 148 aa3.34□□□□□ -1.87
RNU4-4P-201ENST00000364588 CST9LP1Q5W188 147 aa3.34□□□□□ -1.87
RNU4-4P-201ENST00000364588 UFSP1Q6NVU6 142 aa3.34□□□□□ -1.87
RNU4-4P-201ENST00000364588 ZFP2Q6ZN57 461 aa3.34□□□□□ -1.87
RNU4-4P-201ENST00000364588 NIT1Q86X76 327 aa3.34□□□□□ -1.87
RNU4-4P-201ENST00000364588 Q8N976 141 aa3.34□□□□□ -1.87
RNU4-4P-201ENST00000364588 S100ZQ8WXG8 99 aa3.34□□□□□ -1.87
RNU4-4P-201ENST00000364588 FAM218AQ96MZ4 157 aa3.34□□□□□ -1.87
RNU4-4P-201ENST00000364588 MARVELD1Q9BSK0 173 aa3.34□□□□□ -1.87
RNU4-4P-201ENST00000364588 SH3BGRL3Q9H299 93 aa3.34□□□□□ -1.87
RNU4-4P-201ENST00000364588 ARL2-SNX15V9GYD0 113 aa3.34□□□□□ -1.87
RNU4-4P-201ENST00000364588 LRP1Q07954 4544 aaKnown RBP3.34□□□□□ -1.87
RNU4-4P-201ENST00000364588 A0A087WX48 190 aa3.33□□□□□ -1.88
RNU4-4P-201ENST00000364588 GRIFINA4D1Z8 144 aa3.33□□□□□ -1.88
RNU4-4P-201ENST00000364588 FABP5P3A8MUU1 101 aa3.33□□□□□ -1.88
RNU4-4P-201ENST00000364588 M0R381 172 aa3.33□□□□□ -1.88
RNU4-4P-201ENST00000364588 CXorf1O96002 111 aa3.33□□□□□ -1.88
RNU4-4P-201ENST00000364588 IFNA7P01567 189 aa3.33□□□□□ -1.88
RNU4-4P-201ENST00000364588 ARMS2P0C7Q2 107 aa3.33□□□□□ -1.88
RNU4-4P-201ENST00000364588 UBE2G2P60604 165 aa3.33□□□□□ -1.88
RNU4-4P-201ENST00000364588 CFAP161Q6P656 301 aa3.33□□□□□ -1.88
RNU4-4P-201ENST00000364588 Q86TA4 180 aa3.33□□□□□ -1.88
RNU4-4P-201ENST00000364588 OR2G3Q8NGZ4 309 aa3.33□□□□□ -1.88
RNU4-4P-201ENST00000364588 SUN5Q8TC36 379 aa3.33□□□□□ -1.88
RNU4-4P-201ENST00000364588 CHCHD5Q9BSY4 110 aa3.33□□□□□ -1.88
RNU4-4P-201ENST00000364588 TMEM167BQ9NRX6 74 aa3.33□□□□□ -1.88
RNU4-4P-201ENST00000364588 IL36BQ9NZH7 164 aa3.33□□□□□ -1.88
RNU4-4P-201ENST00000364588 IGLV4-3A0A075B6K6 122 aa3.32□□□□□ -1.88
RNU4-4P-201ENST00000364588 TMSB15BA0A087X1C1 80 aa3.32□□□□□ -1.88
RNU4-4P-201ENST00000364588 A0A1W2PRE2 83 aa3.32□□□□□ -1.88
RNU4-4P-201ENST00000364588 KRBOX1C9JBD0 128 aa3.32□□□□□ -1.88
RNU4-4P-201ENST00000364588 TMEM262E9PQX1 116 aa3.32□□□□□ -1.88
RNU4-4P-201ENST00000364588 PEX7O00628 323 aa3.32□□□□□ -1.88
RNU4-4P-201ENST00000364588 SH2D1AO60880 128 aa3.32□□□□□ -1.88
RNU4-4P-201ENST00000364588 OXTP01178 125 aa3.32□□□□□ -1.88
RNU4-4P-201ENST00000364588 HLA-DQA1P01909 254 aa3.32□□□□□ -1.88
RNU4-4P-201ENST00000364588 SEC11BP0C7V7 166 aa3.32□□□□□ -1.88
RNU4-4P-201ENST00000364588 CRIP1P50238 77 aa3.32□□□□□ -1.88
RNU4-4P-201ENST00000364588 HNRNPA3P51991 378 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms