RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 ZNF876PQ49A33 203 aa11.25□□□□□ -0.61
UBAP1-202ENST00000359544 TEX49A0A1B0GTD5 131 aa11.24□□□□□ -0.61
UBAP1-202ENST00000359544 E7EQL1 145 aa11.24□□□□□ -0.61
UBAP1-202ENST00000359544 H7C2G1 150 aa11.24□□□□□ -0.61
UBAP1-202ENST00000359544 LEPROTO15243 131 aa11.24□□□□□ -0.61
UBAP1-202ENST00000359544 MEIG1Q5JSS6 88 aa11.24□□□□□ -0.61
UBAP1-202ENST00000359544 LINC00477Q96M19 166 aa11.24□□□□□ -0.61
UBAP1-202ENST00000359544 PRRC2AP48634 2157 aaKnown RBP11.24□□□□□ -0.61
UBAP1-202ENST00000359544 FAM110DQ8TAY7 271 aaPredicted RBP11.24□□□□□ -0.61
UBAP1-202ENST00000359544 C16orf92Q96LL3 132 aa11.24□□□□□ -0.61
UBAP1-202ENST00000359544 TMEM126AQ9H061 195 aa11.24□□□□□ -0.61
UBAP1-202ENST00000359544 TRBV30A0A0K0K1B3 111 aa11.23□□□□□ -0.61
UBAP1-202ENST00000359544 ODF3BA8MYP8 253 aa11.23□□□□□ -0.61
UBAP1-202ENST00000359544 B9A039 149 aa11.23□□□□□ -0.61
UBAP1-202ENST00000359544 C9orf139Q6ZV77 190 aa11.23□□□□□ -0.61
UBAP1-202ENST00000359544 ZNRF2Q8NHG8 242 aa11.23□□□□□ -0.61
UBAP1-202ENST00000359544 TNFRSF18Q9Y5U5 241 aa11.23□□□□□ -0.61
UBAP1-202ENST00000359544 EIF4EBP3O60516 100 aaPredicted RBP11.23□□□□□ -0.61
UBAP1-202ENST00000359544 IGHV4-39P01824 125 aa11.23□□□□□ -0.61
UBAP1-202ENST00000359544 Q8N6K4 173 aa11.23□□□□□ -0.61
UBAP1-202ENST00000359544 ITPR3Q14573 2671 aa11.22□□□□□ -0.61
UBAP1-202ENST00000359544 IGHV4OR15-8A0A075B7B6 117 aa11.22□□□□□ -0.61
UBAP1-202ENST00000359544 IGHV3OR16-13A0A075B7E8 117 aa11.22□□□□□ -0.61
UBAP1-202ENST00000359544 A0A087WW49 117 aa11.22□□□□□ -0.61
UBAP1-202ENST00000359544 IGHV7-81A0A0B4J1V7 117 aa11.22□□□□□ -0.61
UBAP1-202ENST00000359544 IGHV3-74A0A0B4J1X5 117 aa11.22□□□□□ -0.61
UBAP1-202ENST00000359544 VCYO14598 125 aa11.22□□□□□ -0.61
UBAP1-202ENST00000359544 MUSTN1Q8IVN3 82 aa11.22□□□□□ -0.61
UBAP1-202ENST00000359544 FAM240AA0A1B0GVK7 77 aa11.22□□□□□ -0.61
UBAP1-202ENST00000359544 LYNX1G3V0Z9 82 aa11.22□□□□□ -0.61
UBAP1-202ENST00000359544 LYNX1P0DP58 116 aa11.22□□□□□ -0.61
UBAP1-202ENST00000359544 TEP1Q99973 2627 aaKnown RBP11.21□□□□□ -0.61
UBAP1-202ENST00000359544 H3BT86 120 aa11.21□□□□□ -0.61
UBAP1-202ENST00000359544 M0R1W7 72 aa11.21□□□□□ -0.61
UBAP1-202ENST00000359544 KLK9Q2XQG4 91 aa11.21□□□□□ -0.61
UBAP1-202ENST00000359544 C2orf82Q6UX34 121 aa11.21□□□□□ -0.61
UBAP1-202ENST00000359544 ZFAND2AQ8N6M9 145 aa11.21□□□□□ -0.61
UBAP1-202ENST00000359544 KLK9Q9UKQ9 250 aa11.21□□□□□ -0.61
UBAP1-202ENST00000359544 A0A0J9YX75 114 aa11.2□□□□□ -0.62
UBAP1-202ENST00000359544 OOSP1A8MZH6 123 aa11.2□□□□□ -0.62
UBAP1-202ENST00000359544 J3KRW8 73 aa11.2□□□□□ -0.62
UBAP1-202ENST00000359544 M0R2P5 195 aa11.2□□□□□ -0.62
UBAP1-202ENST00000359544 SPRY2O43597 315 aa11.2□□□□□ -0.62
UBAP1-202ENST00000359544 POLR2KP53803 58 aaKnown RBP11.2□□□□□ -0.62
UBAP1-202ENST00000359544 TMEM223A0PJW6 202 aa11.2□□□□□ -0.62
UBAP1-202ENST00000359544 RPL39P62891 51 aaKnown RBP11.2□□□□□ -0.62
UBAP1-202ENST00000359544 EBI3Q14213 229 aa11.2□□□□□ -0.62
UBAP1-202ENST00000359544 CLEC19AQ6UXS0 136 aa11.2□□□□□ -0.62
UBAP1-202ENST00000359544 CCL19Q99731 98 aa11.2□□□□□ -0.62
UBAP1-202ENST00000359544 HIVEP1P15822 2718 aa11.2□□□□□ -0.62
UBAP1-202ENST00000359544 SDHAF1A6NFY7 115 aa11.19□□□□□ -0.62
UBAP1-202ENST00000359544 U3KQE9 123 aa11.19□□□□□ -0.62
UBAP1-202ENST00000359544 IGHV3-49A0A0A0MS15 119 aa11.19□□□□□ -0.62
UBAP1-202ENST00000359544 OVOL1O14753 267 aa11.19□□□□□ -0.62
UBAP1-202ENST00000359544 NXPH4O95158 308 aa11.19□□□□□ -0.62
UBAP1-202ENST00000359544 ELANEP08246 267 aa11.19□□□□□ -0.62
UBAP1-202ENST00000359544 EEF1AKMT3Q96AZ1 226 aa11.19□□□□□ -0.62
UBAP1-202ENST00000359544 TRIAP1O43715 76 aa11.18□□□□□ -0.62
UBAP1-202ENST00000359544 IGHV1-69P01742 117 aa11.18□□□□□ -0.62
UBAP1-202ENST00000359544 IGF1P05019 195 aa11.18□□□□□ -0.62
UBAP1-202ENST00000359544 CCDC140Q96MF4 163 aa11.18□□□□□ -0.62
UBAP1-202ENST00000359544 ECSCRQ19T08 205 aa11.18□□□□□ -0.62
UBAP1-202ENST00000359544 BEX4Q9NWD9 120 aaPredicted RBP11.18□□□□□ -0.62
UBAP1-202ENST00000359544 TRBV7-7A0A0K0K1E9 115 aa11.17□□□□□ -0.62
UBAP1-202ENST00000359544 COX6CP09669 75 aa11.17□□□□□ -0.62
UBAP1-202ENST00000359544 KIF25-AS1Q9Y6Z4 181 aa11.17□□□□□ -0.62
UBAP1-202ENST00000359544 ACANP16112 2415 aa11.17□□□□□ -0.62
UBAP1-202ENST00000359544 TRBV7-1A0A0A6YYK4 115 aa11.17□□□□□ -0.62
UBAP1-202ENST00000359544 RNASE3P12724 160 aaKnown RBP11.17□□□□□ -0.62
UBAP1-202ENST00000359544 VMO1Q7Z5L0 202 aa11.17□□□□□ -0.62
UBAP1-202ENST00000359544 C20orf173Q96LM9 149 aa11.17□□□□□ -0.62
UBAP1-202ENST00000359544 LY6HO94772 140 aa11.16□□□□□ -0.62
UBAP1-202ENST00000359544 ZNF56Q15929 161 aa11.16□□□□□ -0.62
UBAP1-202ENST00000359544 DEFB113Q30KQ7 82 aa11.16□□□□□ -0.62
UBAP1-202ENST00000359544 Q8N9W7 124 aa11.16□□□□□ -0.62
UBAP1-202ENST00000359544 SPANXDQ9BXN6 97 aa11.16□□□□□ -0.62
UBAP1-202ENST00000359544 H7C423 109 aa11.16□□□□□ -0.62
UBAP1-202ENST00000359544 LINC00315P59091 139 aa11.16□□□□□ -0.62
UBAP1-202ENST00000359544 DEFB121Q5J5C9 76 aa11.16□□□□□ -0.62
UBAP1-202ENST00000359544 SUMO4Q6EEV6 95 aa11.16□□□□□ -0.62
UBAP1-202ENST00000359544 WFDC11Q8NEX6 87 aa11.16□□□□□ -0.62
UBAP1-202ENST00000359544 ICOSQ9Y6W8 199 aa11.16□□□□□ -0.62
UBAP1-202ENST00000359544 ZANQ9Y493 2812 aa11.16□□□□□ -0.62
UBAP1-202ENST00000359544 TRBV27A0A0K0K1C4 114 aa11.15□□□□□ -0.62
UBAP1-202ENST00000359544 MINOS1Q5TGZ0 78 aa11.15□□□□□ -0.62
UBAP1-202ENST00000359544 MINOS1-NBL1R4GNA1 71 aa11.15□□□□□ -0.62
UBAP1-202ENST00000359544 FLNAP21333 2647 aaKnown RBP11.15□□□□□ -0.62
UBAP1-202ENST00000359544 GNRH2O43555 120 aa11.15□□□□□ -0.62
UBAP1-202ENST00000359544 RNASE4P34096 147 aaKnown RBP11.15□□□□□ -0.62
UBAP1-202ENST00000359544 C1orf122Q6ZSJ8 110 aa11.15□□□□□ -0.62
UBAP1-202ENST00000359544 TMEM101Q96IK0 257 aa11.15□□□□□ -0.62
UBAP1-202ENST00000359544 APRG1Q8IVJ8 170 aa11.14□□□□□ -0.63
UBAP1-202ENST00000359544 SVEP1Q4LDE5 3571 aa11.14□□□□□ -0.63
UBAP1-202ENST00000359544 A0A0J9YXY3 114 aa11.14□□□□□ -0.63
UBAP1-202ENST00000359544 TRBV6-5A0A0K0K1A5 114 aa11.14□□□□□ -0.63
UBAP1-202ENST00000359544 BRI3O95415 125 aa11.14□□□□□ -0.63
UBAP1-202ENST00000359544 ZNF22P17026 224 aaPredicted RBP11.14□□□□□ -0.63
UBAP1-202ENST00000359544 RHOHQ15669 191 aa11.14□□□□□ -0.63
UBAP1-202ENST00000359544 CHCHD5Q9BSY4 110 aa11.14□□□□□ -0.63
UBAP1-202ENST00000359544 ATP6V0E1O15342 81 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms