RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 Q6ZSV7 163 aa13.92□□□□□ -0.18
SNX11-201ENST00000359238 CITED1Q99966 193 aa13.92□□□□□ -0.18
SNX11-201ENST00000359238 IGKV3D-20A0A0C4DH25 116 aa13.92□□□□□ -0.18
SNX11-201ENST00000359238 SRSF9Q13242 221 aaKnown RBP eCLIP13.92□□□□□ -0.18
SNX11-201ENST00000359238 TOMM6Q96B49 74 aa13.92□□□□□ -0.18
SNX11-201ENST00000359238 SCGB3A1Q96QR1 104 aa13.92□□□□□ -0.18
SNX11-201ENST00000359238 TCL1BO95988 128 aa13.91□□□□□ -0.18
SNX11-201ENST00000359238 DEFB136Q30KP8 78 aa13.91□□□□□ -0.18
SNX11-201ENST00000359238 Q6ZQT7 251 aa13.91□□□□□ -0.18
SNX11-201ENST00000359238 SMIM2Q9BVW6 85 aa13.91□□□□□ -0.18
SNX11-201ENST00000359238 HIVEP1P15822 2718 aa13.91□□□□□ -0.18
SNX11-201ENST00000359238 ORMDL2Q53FV1 153 aa13.91□□□□□ -0.18
SNX11-201ENST00000359238 CFAP161Q6P656 301 aa13.91□□□□□ -0.18
SNX11-201ENST00000359238 SFTA2Q6UW10 78 aa13.91□□□□□ -0.18
SNX11-201ENST00000359238 SCGB1D4Q6XE38 83 aa13.91□□□□□ -0.18
SNX11-201ENST00000359238 TMEM89A2RUT3 159 aa13.9□□□□□ -0.18
SNX11-201ENST00000359238 RBAKDNA6NC62 111 aa13.9□□□□□ -0.18
SNX11-201ENST00000359238 NDUFA11Q86Y39 141 aa13.9□□□□□ -0.18
SNX11-201ENST00000359238 SORL1Q92673 2214 aa13.9□□□□□ -0.18
SNX11-201ENST00000359238 IGHV4-4A0A075B6R2 117 aa13.9□□□□□ -0.18
SNX11-201ENST00000359238 ELANEP08246 267 aa13.9□□□□□ -0.18
SNX11-201ENST00000359238 PLEKHB2Q96CS7 222 aa13.9□□□□□ -0.18
SNX11-201ENST00000359238 RHPN1-AS1Q9BWJ2 59 aa13.9□□□□□ -0.18
SNX11-201ENST00000359238 UFC1Q9Y3C8 167 aa13.9□□□□□ -0.18
SNX11-201ENST00000359238 IGHV4OR15-8A0A075B7B6 117 aa13.89□□□□□ -0.19
SNX11-201ENST00000359238 A0A087WW49 117 aa13.89□□□□□ -0.19
SNX11-201ENST00000359238 ANKRD29Q8N6D5 301 aa13.89□□□□□ -0.19
SNX11-201ENST00000359238 C11orf21Q9P2W6 132 aa13.89□□□□□ -0.19
SNX11-201ENST00000359238 IGHV7-4-1A0A0J9YVY3 117 aa13.89□□□□□ -0.19
SNX11-201ENST00000359238 NHLRC4P0CG21 123 aaPredicted RBP13.89□□□□□ -0.19
SNX11-201ENST00000359238 DUX3Q96PT4 197 aa13.89□□□□□ -0.19
SNX11-201ENST00000359238 SETXQ7Z333 2677 aaKnown RBP13.88□□□□□ -0.19
SNX11-201ENST00000359238 B5MCH6 92 aa13.88□□□□□ -0.19
SNX11-201ENST00000359238 SOCS3O14543 225 aa13.87□□□□□ -0.19
SNX11-201ENST00000359238 SLC50A1Q9BRV3 221 aa13.87□□□□□ -0.19
SNX11-201ENST00000359238 AGPAT4-IT1Q9H0P7 198 aa13.87□□□□□ -0.19
SNX11-201ENST00000359238 M0QXV9 152 aa13.87□□□□□ -0.19
SNX11-201ENST00000359238 RHODO00212 210 aa13.87□□□□□ -0.19
SNX11-201ENST00000359238 RPL11P62913 178 aaKnown RBP13.87□□□□□ -0.19
SNX11-201ENST00000359238 KIR2DL4Q99706 377 aa13.87□□□□□ -0.19
SNX11-201ENST00000359238 DAZ1Q9NQZ3 744 aaKnown RBP13.87□□□□□ -0.19
SNX11-201ENST00000359238 INAFM1C9JVW0 142 aa13.86□□□□□ -0.19
SNX11-201ENST00000359238 F6UB75 175 aa13.86□□□□□ -0.19
SNX11-201ENST00000359238 KHDC1LQ5JSQ8 128 aa13.86□□□□□ -0.19
SNX11-201ENST00000359238 BAALCQ8WXS3 180 aa13.86□□□□□ -0.19
SNX11-201ENST00000359238 C16orf92Q96LL3 132 aa13.86□□□□□ -0.19
SNX11-201ENST00000359238 ASIPP42127 132 aa13.86□□□□□ -0.19
SNX11-201ENST00000359238 SYNJ2BPP57105 145 aa13.86□□□□□ -0.19
SNX11-201ENST00000359238 RNF152Q8N8N0 203 aa13.86□□□□□ -0.19
SNX11-201ENST00000359238 RASL10AQ92737 203 aa13.86□□□□□ -0.19
SNX11-201ENST00000359238 UBE2E2Q96LR5 201 aa13.86□□□□□ -0.19
SNX11-201ENST00000359238 WNK1Q9H4A3 2382 aa13.85□□□□□ -0.19
SNX11-201ENST00000359238 H3BVH4 76 aa13.85□□□□□ -0.19
SNX11-201ENST00000359238 C11orf44Q8N8P7 122 aa13.85□□□□□ -0.19
SNX11-201ENST00000359238 NSD1Q96L73 2696 aaPredicted RBP13.85□□□□□ -0.19
SNX11-201ENST00000359238 RNASE1P07998 156 aaKnown RBP13.85□□□□□ -0.19
SNX11-201ENST00000359238 SPANXN1Q5VSR9 72 aa13.85□□□□□ -0.19
SNX11-201ENST00000359238 HILS1P60008 231 aa13.84□□□□□ -0.19
SNX11-201ENST00000359238 A0A0J9YY99 117 aa13.84□□□□□ -0.19
SNX11-201ENST00000359238 C10orf126Q8N4M7 172 aa13.84□□□□□ -0.19
SNX11-201ENST00000359238 CFC1BP0CG36 223 aa13.83□□□□□ -0.2
SNX11-201ENST00000359238 CFC1P0CG37 223 aa13.83□□□□□ -0.2
SNX11-201ENST00000359238 SLURP1P55000 103 aa13.83□□□□□ -0.2
SNX11-201ENST00000359238 SUMO2P61956 95 aaKnown RBP13.83□□□□□ -0.2
SNX11-201ENST00000359238 PRR9Q5T870 116 aa13.83□□□□□ -0.2
SNX11-201ENST00000359238 HOXD3P31249 432 aaPredicted RBP13.82□□□□□ -0.2
SNX11-201ENST00000359238 NDUFV3P56181 108 aaKnown RBP13.82□□□□□ -0.2
SNX11-201ENST00000359238 GAGE2BQ13066 116 aa13.82□□□□□ -0.2
SNX11-201ENST00000359238 GAGE2EQ4V326 116 aa13.82□□□□□ -0.2
SNX11-201ENST00000359238 GAGE2DQ9UEU5 116 aa13.82□□□□□ -0.2
SNX11-201ENST00000359238 SCGB1C2P0DMR2 95 aa13.82□□□□□ -0.2
SNX11-201ENST00000359238 C2orf66Q6UXQ4 117 aa13.82□□□□□ -0.2
SNX11-201ENST00000359238 KLHL30-AS1Q8NEE0 82 aa13.82□□□□□ -0.2
SNX11-201ENST00000359238 FN1P02751 2386 aaKnown RBP13.82□□□□□ -0.2
SNX11-201ENST00000359238 FAM110AQ9BQ89 295 aa13.81□□□□□ -0.2
SNX11-201ENST00000359238 GAGE12JA6NER3 117 aa13.81□□□□□ -0.2
SNX11-201ENST00000359238 J3KRW8 73 aa13.81□□□□□ -0.2
SNX11-201ENST00000359238 SLC25A20O43772 301 aa13.81□□□□□ -0.2
SNX11-201ENST00000359238 GAGE7O76087 117 aa13.81□□□□□ -0.2
SNX11-201ENST00000359238 IGHV3-30P01768 117 aa13.81□□□□□ -0.2
SNX11-201ENST00000359238 GAGE12FP0CL80 117 aa13.81□□□□□ -0.2
SNX11-201ENST00000359238 GAGE12GP0CL81 117 aa13.81□□□□□ -0.2
SNX11-201ENST00000359238 GAGE12IP0CL82 117 aa13.81□□□□□ -0.2
SNX11-201ENST00000359238 IGHV3-30-5P0DP03 117 aa13.81□□□□□ -0.2
SNX11-201ENST00000359238 GAGE4Q13068 117 aa13.81□□□□□ -0.2
SNX11-201ENST00000359238 SNCGO76070 127 aa13.8□□□□□ -0.2
SNX11-201ENST00000359238 PRO1854Q9UHT4 67 aa13.8□□□□□ -0.2
SNX11-201ENST00000359238 TRBV7-9A0A0J9YWB2 115 aa13.8□□□□□ -0.2
SNX11-201ENST00000359238 HERVK_113P61574 105 aa13.8□□□□□ -0.2
SNX11-201ENST00000359238 Q6Q795 121 aa13.8□□□□□ -0.2
SNX11-201ENST00000359238 LINC01006Q8NI28 216 aa13.8□□□□□ -0.2
SNX11-201ENST00000359238 DCANP1Q8TF63 244 aa13.8□□□□□ -0.2
SNX11-201ENST00000359238 PAPPA-AS1Q5QFB9 102 aa13.79□□□□□ -0.2
SNX11-201ENST00000359238 K7EMT4 169 aa13.79□□□□□ -0.2
SNX11-201ENST00000359238 SLC25A29Q8N8R3 303 aa13.79□□□□□ -0.2
SNX11-201ENST00000359238 BAHCC1Q9P281 2608 aa13.78□□□□□ -0.2
SNX11-201ENST00000359238 C9orf47Q6ZRZ4 202 aa13.78□□□□□ -0.2
SNX11-201ENST00000359238 A0A1W2PRX2 142 aa13.78□□□□□ -0.2
SNX11-201ENST00000359238 TRAV4A0A0B4J268 109 aa13.77□□□□□ -0.21
SNX11-201ENST00000359238 CD28P10747 220 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms