RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 DEFB130BP0DP73 79 aa10.67□□□□□ -0.7
SIRPA-202ENST00000358771 DEFB130AP0DP74 79 aa10.67□□□□□ -0.7
SIRPA-202ENST00000358771 HTN3P15516 51 aa10.67□□□□□ -0.7
SIRPA-202ENST00000358771 GAGE1Q13065 139 aa10.67□□□□□ -0.7
SIRPA-202ENST00000358771 PGPEP1Q9NXJ5 209 aa10.67□□□□□ -0.7
SIRPA-202ENST00000358771 MYMXA0A1B0GTQ4 84 aa10.67□□□□□ -0.7
SIRPA-202ENST00000358771 K7EQG2 157 aa10.67□□□□□ -0.7
SIRPA-202ENST00000358771 ZNRF2Q8NHG8 242 aa10.67□□□□□ -0.7
SIRPA-202ENST00000358771 HELZ2Q9BYK8 2649 aaKnown RBP10.67□□□□□ -0.7
SIRPA-202ENST00000358771 A0A096LNJ9 63 aa10.67□□□□□ -0.7
SIRPA-202ENST00000358771 RNASE3P12724 160 aaKnown RBP10.67□□□□□ -0.7
SIRPA-202ENST00000358771 ADAMTSL5Q6ZMM2 481 aa10.67□□□□□ -0.7
SIRPA-202ENST00000358771 GAGE12JA6NER3 117 aa10.67□□□□□ -0.7
SIRPA-202ENST00000358771 C9orf118A6NHY6 69 aa10.67□□□□□ -0.7
SIRPA-202ENST00000358771 GAGE4Q13068 117 aa10.67□□□□□ -0.7
SIRPA-202ENST00000358771 GAGE5Q13069 117 aa10.67□□□□□ -0.7
SIRPA-202ENST00000358771 GAGE13Q4V321 117 aa10.67□□□□□ -0.7
SIRPA-202ENST00000358771 H3BRM9 83 aa10.66□□□□□ -0.7
SIRPA-202ENST00000358771 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.66□□□□□ -0.7
SIRPA-202ENST00000358771 IGKV2-29A2NJV5 120 aaPredicted RBP10.66□□□□□ -0.7
SIRPA-202ENST00000358771 GAGE7O76087 117 aa10.65□□□□□ -0.7
SIRPA-202ENST00000358771 GAGE12FP0CL80 117 aa10.65□□□□□ -0.7
SIRPA-202ENST00000358771 GAGE12GP0CL81 117 aa10.65□□□□□ -0.7
SIRPA-202ENST00000358771 GAGE12IP0CL82 117 aa10.65□□□□□ -0.7
SIRPA-202ENST00000358771 AZU1P20160 251 aa10.65□□□□□ -0.7
SIRPA-202ENST00000358771 NRACQ8N912 160 aa10.65□□□□□ -0.7
SIRPA-202ENST00000358771 BAALCQ8WXS3 180 aa10.65□□□□□ -0.7
SIRPA-202ENST00000358771 CITED2Q99967 270 aaPredicted RBP10.65□□□□□ -0.7
SIRPA-202ENST00000358771 RPL36AP83881 106 aaKnown RBP10.65□□□□□ -0.7
SIRPA-202ENST00000358771 DCANP1Q8TF63 244 aa10.65□□□□□ -0.7
SIRPA-202ENST00000358771 RPL36ALQ969Q0 106 aaKnown RBP10.65□□□□□ -0.7
SIRPA-202ENST00000358771 CST9LQ9H4G1 147 aa10.65□□□□□ -0.7
SIRPA-202ENST00000358771 ITPR1Q14643 2758 aa10.64□□□□□ -0.71
SIRPA-202ENST00000358771 A8MWV9 139 aa10.64□□□□□ -0.71
SIRPA-202ENST00000358771 CRYBG3Q68DQ2 2970 aa10.64□□□□□ -0.71
SIRPA-202ENST00000358771 CEMP1Q6PRD7 247 aaPredicted RBP10.64□□□□□ -0.71
SIRPA-202ENST00000358771 ZNF702PQ9H963 129 aa10.64□□□□□ -0.71
SIRPA-202ENST00000358771 A0A0J9YXV3 536 aa10.64□□□□□ -0.71
SIRPA-202ENST00000358771 LINC01549A6NIU2 74 aa10.64□□□□□ -0.71
SIRPA-202ENST00000358771 CEND1Q8N111 149 aa10.64□□□□□ -0.71
SIRPA-202ENST00000358771 CHCHD5Q9BSY4 110 aa10.64□□□□□ -0.71
SIRPA-202ENST00000358771 DNAJC9-AS1A6NH13 148 aa10.63□□□□□ -0.71
SIRPA-202ENST00000358771 C11orf86A6NJI1 115 aa10.63□□□□□ -0.71
SIRPA-202ENST00000358771 M0R2P5 195 aa10.63□□□□□ -0.71
SIRPA-202ENST00000358771 CNFNQ9BYD5 112 aa10.63□□□□□ -0.71
SIRPA-202ENST00000358771 PROK1P58294 105 aa10.63□□□□□ -0.71
SIRPA-202ENST00000358771 ZANQ9Y493 2812 aa10.63□□□□□ -0.71
SIRPA-202ENST00000358771 CIRBPQ14011 172 aaKnown RBP10.62□□□□□ -0.71
SIRPA-202ENST00000358771 TMEM101Q96IK0 257 aa10.62□□□□□ -0.71
SIRPA-202ENST00000358771 TIMM21Q9BVV7 248 aa10.62□□□□□ -0.71
SIRPA-202ENST00000358771 TOMM6Q96B49 74 aa10.62□□□□□ -0.71
SIRPA-202ENST00000358771 NOP10Q9NPE3 64 aaKnown RBP10.62□□□□□ -0.71
SIRPA-202ENST00000358771 DCHS2Q6V1P9 2916 aa10.62□□□□□ -0.71
SIRPA-202ENST00000358771 OR5A1Q8NGJ0 315 aa10.62□□□□□ -0.71
SIRPA-202ENST00000358771 TMEM141Q96I45 108 aa10.62□□□□□ -0.71
SIRPA-202ENST00000358771 H3BMG7 143 aa10.61□□□□□ -0.71
SIRPA-202ENST00000358771 A0A1W2PPM0 123 aa10.61□□□□□ -0.71
SIRPA-202ENST00000358771 J3QQQ9 107 aa10.61□□□□□ -0.71
SIRPA-202ENST00000358771 RNASE8Q8TDE3 154 aaKnown RBP10.61□□□□□ -0.71
SIRPA-202ENST00000358771 SIVA1O15304 175 aa10.61□□□□□ -0.71
SIRPA-202ENST00000358771 Q6ZSV7 163 aa10.61□□□□□ -0.71
SIRPA-202ENST00000358771 C2orf91Q6ZV80 131 aa10.61□□□□□ -0.71
SIRPA-202ENST00000358771 TEX15Q9BXT5 2789 aa10.61□□□□□ -0.71
SIRPA-202ENST00000358771 OCIAD2Q56VL3 154 aa10.6□□□□□ -0.71
SIRPA-202ENST00000358771 MAPKAPK5-AS1Q8N8E1 139 aa10.6□□□□□ -0.71
SIRPA-202ENST00000358771 SPAG8Q99932 426 aaPredicted RBP10.6□□□□□ -0.71
SIRPA-202ENST00000358771 FGF6P10767 208 aa10.6□□□□□ -0.71
SIRPA-202ENST00000358771 C12orf74Q32Q52 190 aa10.6□□□□□ -0.71
SIRPA-202ENST00000358771 MAP6D1Q9H9H5 199 aa10.6□□□□□ -0.71
SIRPA-202ENST00000358771 H3BMM0 161 aa10.59□□□□□ -0.71
SIRPA-202ENST00000358771 RHODO00212 210 aa10.59□□□□□ -0.71
SIRPA-202ENST00000358771 ETDBQ3ZM63 59 aa10.59□□□□□ -0.71
SIRPA-202ENST00000358771 TMEM89A2RUT3 159 aa10.59□□□□□ -0.71
SIRPA-202ENST00000358771 COX6CP09669 75 aa10.59□□□□□ -0.71
SIRPA-202ENST00000358771 COX8CQ7Z4L0 72 aa10.59□□□□□ -0.71
SIRPA-202ENST00000358771 HRNRQ86YZ3 2850 aaPredicted RBP10.59□□□□□ -0.71
SIRPA-202ENST00000358771 KLLNB2CW77 178 aa10.59□□□□□ -0.71
SIRPA-202ENST00000358771 C11orf68Q9H3H3 251 aaKnown RBP10.59□□□□□ -0.71
SIRPA-202ENST00000358771 CIDEAO60543 219 aa10.58□□□□□ -0.71
SIRPA-202ENST00000358771 MED14OSP0DP75 135 aa10.58□□□□□ -0.71
SIRPA-202ENST00000358771 CRIP2P52943 208 aaPredicted RBP10.58□□□□□ -0.72
SIRPA-202ENST00000358771 SOCS3O14543 225 aa10.58□□□□□ -0.72
SIRPA-202ENST00000358771 SPINK8P0C7L1 97 aa10.58□□□□□ -0.72
SIRPA-202ENST00000358771 TSSC4Q9Y5U2 329 aaPredicted RBP10.58□□□□□ -0.72
SIRPA-202ENST00000358771 K7EP34 96 aa10.58□□□□□ -0.72
SIRPA-202ENST00000358771 PLEKHB2Q96CS7 222 aa10.58□□□□□ -0.72
SIRPA-202ENST00000358771 A0A096LPF7 62 aa10.57□□□□□ -0.72
SIRPA-202ENST00000358771 TRBV7-9A0A0J9YWB2 115 aa10.57□□□□□ -0.72
SIRPA-202ENST00000358771 C4orf3Q8WVX3 66 aa10.57□□□□□ -0.72
SIRPA-202ENST00000358771 TMEM238C9JI98 176 aa10.57□□□□□ -0.72
SIRPA-202ENST00000358771 SMAGPQ0VAQ4 97 aa10.57□□□□□ -0.72
SIRPA-202ENST00000358771 ERG28Q9UKR5 140 aa10.57□□□□□ -0.72
SIRPA-202ENST00000358771 CHD6Q8TD26 2715 aa10.56□□□□□ -0.72
SIRPA-202ENST00000358771 DEFB114Q30KQ6 69 aa10.56□□□□□ -0.72
SIRPA-202ENST00000358771 PSMG3-AS1Q96PY0 264 aa10.56□□□□□ -0.72
SIRPA-202ENST00000358771 UTP20O75691 2785 aaKnown RBP10.55□□□□□ -0.72
SIRPA-202ENST00000358771 TRAV12-1A0A0B4J245 112 aa10.55□□□□□ -0.72
SIRPA-202ENST00000358771 LGALS9O00182 355 aa10.55□□□□□ -0.72
SIRPA-202ENST00000358771 WFDC10AQ9H1F0 79 aa10.55□□□□□ -0.72
SIRPA-202ENST00000358771 RHOHQ15669 191 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms