RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 A0A096LPF7 62 aa17.66■□□□□ 0.42
SSBP3-202ENST00000357475 NUDT3O95989 172 aa17.65■□□□□ 0.42
SSBP3-202ENST00000357475 KIAA1644Q3SXP7 199 aa17.65■□□□□ 0.42
SSBP3-202ENST00000357475 D6R8Y8 96 aa17.64■□□□□ 0.41
SSBP3-202ENST00000357475 MRAP2Q96G30 205 aa17.64■□□□□ 0.41
SSBP3-202ENST00000357475 H3BNG1 76 aa17.63■□□□□ 0.41
SSBP3-202ENST00000357475 HLA-DQA1P01909 254 aa17.63■□□□□ 0.41
SSBP3-202ENST00000357475 LINC00694P0DN24 101 aa17.63■□□□□ 0.41
SSBP3-202ENST00000357475 ZNRF2Q8NHG8 242 aa17.63■□□□□ 0.41
SSBP3-202ENST00000357475 MRPL18Q9H0U6 180 aaKnown RBP17.63■□□□□ 0.41
SSBP3-202ENST00000357475 APCSP02743 223 aa17.62■□□□□ 0.41
SSBP3-202ENST00000357475 NRACQ8N912 160 aa17.62■□□□□ 0.41
SSBP3-202ENST00000357475 APLNQ9ULZ1 77 aa17.62■□□□□ 0.41
SSBP3-202ENST00000357475 TRBV10-1A0A0K0K1A3 114 aa17.62■□□□□ 0.41
SSBP3-202ENST00000357475 H7C1H1 209 aa17.62■□□□□ 0.41
SSBP3-202ENST00000357475 CKS2P33552 79 aa17.62■□□□□ 0.41
SSBP3-202ENST00000357475 CASC10Q5T4H9 136 aa17.62■□□□□ 0.41
SSBP3-202ENST00000357475 FRZBQ92765 325 aa17.62■□□□□ 0.41
SSBP3-202ENST00000357475 NIT2Q9NQR4 276 aa17.62■□□□□ 0.41
SSBP3-202ENST00000357475 KLK5Q9Y337 293 aaPredicted RBP17.62■□□□□ 0.41
SSBP3-202ENST00000357475 ICOSQ9Y6W8 199 aa17.62■□□□□ 0.41
SSBP3-202ENST00000357475 COX19Q49B96 90 aa17.61■□□□□ 0.41
SSBP3-202ENST00000357475 TRAPPC1Q9Y5R8 145 aa17.61■□□□□ 0.41
SSBP3-202ENST00000357475 LYSTQ99698 3801 aa17.6■□□□□ 0.41
SSBP3-202ENST00000357475 TRBV7-3A0A075B6L6 115 aa17.59■□□□□ 0.41
SSBP3-202ENST00000357475 NPYP01303 97 aa17.59■□□□□ 0.41
SSBP3-202ENST00000357475 MT-ND6P03923 174 aa17.59■□□□□ 0.41
SSBP3-202ENST00000357475 FABP9Q0Z7S8 132 aa17.59■□□□□ 0.41
SSBP3-202ENST00000357475 OR10J3Q5JRS4 329 aa17.59■□□□□ 0.41
SSBP3-202ENST00000357475 IGHV3-38A0A0C4DH36 116 aa17.58■□□□□ 0.41
SSBP3-202ENST00000357475 RAB5AP20339 215 aa17.58■□□□□ 0.41
SSBP3-202ENST00000357475 SRIP30626 198 aa17.58■□□□□ 0.41
SSBP3-202ENST00000357475 UBE2D3P61077 147 aa17.58■□□□□ 0.41
SSBP3-202ENST00000357475 UBE2D2P62837 147 aa17.58■□□□□ 0.41
SSBP3-202ENST00000357475 RPL36AP83881 106 aaKnown RBP17.58■□□□□ 0.41
SSBP3-202ENST00000357475 C15orf53Q8NAA6 179 aa17.58■□□□□ 0.41
SSBP3-202ENST00000357475 DEFB104AQ8WTQ1 72 aa17.58■□□□□ 0.41
SSBP3-202ENST00000357475 RPL36ALQ969Q0 106 aaKnown RBP17.58■□□□□ 0.41
SSBP3-202ENST00000357475 MRPL23Q16540 153 aaKnown RBP17.57■□□□□ 0.4
SSBP3-202ENST00000357475 ORMDL3Q8N138 153 aa17.57■□□□□ 0.4
SSBP3-202ENST00000357475 TNFRSF18Q9Y5U5 241 aa17.57■□□□□ 0.4
SSBP3-202ENST00000357475 C3orf84H3BNL1 204 aa17.57■□□□□ 0.4
SSBP3-202ENST00000357475 NEGR1Q7Z3B1 354 aa17.57■□□□□ 0.4
SSBP3-202ENST00000357475 PRELID3AQ96N28 172 aa17.57■□□□□ 0.4
SSBP3-202ENST00000357475 TNFRSF6BO95407 300 aa17.56■□□□□ 0.4
SSBP3-202ENST00000357475 DNAJC30Q96LL9 226 aa17.56■□□□□ 0.4
SSBP3-202ENST00000357475 TRBV6-5A0A0K0K1A5 114 aa17.54■□□□□ 0.4
SSBP3-202ENST00000357475 PPBPP02775 128 aa17.54■□□□□ 0.4
SSBP3-202ENST00000357475 ATP6V0E2Q8NHE4 81 aa17.54■□□□□ 0.4
SSBP3-202ENST00000357475 TRGC2P03986 189 aa17.53■□□□□ 0.4
SSBP3-202ENST00000357475 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.53■□□□□ 0.4
SSBP3-202ENST00000357475 ST20Q9HBF5 79 aa17.53■□□□□ 0.4
SSBP3-202ENST00000357475 SDHAF1A6NFY7 115 aa17.52■□□□□ 0.4
SSBP3-202ENST00000357475 ESRGQ1W209 222 aa17.52■□□□□ 0.4
SSBP3-202ENST00000357475 ALKBH7Q9BT30 221 aaPredicted RBP17.52■□□□□ 0.4
SSBP3-202ENST00000357475 TMEM70Q9BUB7 260 aa17.52■□□□□ 0.39
SSBP3-202ENST00000357475 VPS13DQ5THJ4 4388 aa17.51■□□□□ 0.39
SSBP3-202ENST00000357475 SUMO2P61956 95 aaKnown RBP17.51■□□□□ 0.39
SSBP3-202ENST00000357475 LYPD5Q6UWN5 251 aa17.51■□□□□ 0.39
SSBP3-202ENST00000357475 PHOX2AO14813 284 aa17.5■□□□□ 0.39
SSBP3-202ENST00000357475 POLR2KP53803 58 aaKnown RBP17.5■□□□□ 0.39
SSBP3-202ENST00000357475 DNAH1Q9P2D7 4330 aa17.5■□□□□ 0.39
SSBP3-202ENST00000357475 LOC389332A0A1B0GUA5 103 aa17.48■□□□□ 0.39
SSBP3-202ENST00000357475 GTSF1LQ9H1H1 148 aa17.48■□□□□ 0.39
SSBP3-202ENST00000357475 PPP1R17O96001 155 aa17.47■□□□□ 0.39
SSBP3-202ENST00000357475 TCTAP57738 103 aa17.47■□□□□ 0.39
SSBP3-202ENST00000357475 NTM-AS1Q6ZSK4 140 aa17.47■□□□□ 0.39
SSBP3-202ENST00000357475 DAZ4Q86SG3 579 aaKnown RBP17.47■□□□□ 0.39
SSBP3-202ENST00000357475 C20orf78Q9BR46 151 aa17.47■□□□□ 0.39
SSBP3-202ENST00000357475 DAZ3Q9NR90 486 aaKnown RBP17.47■□□□□ 0.39
SSBP3-202ENST00000357475 SH2D6Q7Z4S9 175 aa17.47■□□□□ 0.39
SSBP3-202ENST00000357475 LINC00588Q9Y4M8 146 aa17.47■□□□□ 0.39
SSBP3-202ENST00000357475 IQCJQ1A5X6 159 aa17.46■□□□□ 0.39
SSBP3-202ENST00000357475 LAMTOR2Q9Y2Q5 125 aa17.46■□□□□ 0.39
SSBP3-202ENST00000357475 TRBV27A0A0K0K1C4 114 aa17.45■□□□□ 0.38
SSBP3-202ENST00000357475 SMIM2Q9BVW6 85 aa17.45■□□□□ 0.38
SSBP3-202ENST00000357475 TSHBP01222 138 aa17.44■□□□□ 0.38
SSBP3-202ENST00000357475 MAP1LC3AQ9H492 121 aa17.44■□□□□ 0.38
SSBP3-202ENST00000357475 IGLV2-18A0A075B6J9 118 aa17.43■□□□□ 0.38
SSBP3-202ENST00000357475 I3L3M4 83 aa17.43■□□□□ 0.38
SSBP3-202ENST00000357475 PMCHP20382 165 aa17.43■□□□□ 0.38
SSBP3-202ENST00000357475 ALMS1Q8TCU4 4167 aa17.43■□□□□ 0.38
SSBP3-202ENST00000357475 PRSS47A8MTI9 375 aa17.42■□□□□ 0.38
SSBP3-202ENST00000357475 VCYO14598 125 aa17.42■□□□□ 0.38
SSBP3-202ENST00000357475 IFI27P40305 119 aaPredicted RBP17.42■□□□□ 0.38
SSBP3-202ENST00000357475 C18orf32Q8TCD1 76 aa17.42■□□□□ 0.38
SSBP3-202ENST00000357475 CCL18P55774 89 aa17.41■□□□□ 0.38
SSBP3-202ENST00000357475 RPL32P62910 135 aaKnown RBP17.41■□□□□ 0.38
SSBP3-202ENST00000357475 TRBV6-8A0A0A6YYG3 113 aa17.4■□□□□ 0.38
SSBP3-202ENST00000357475 TCAPO15273 167 aa17.4■□□□□ 0.38
SSBP3-202ENST00000357475 TIRAPP58753 221 aa17.4■□□□□ 0.38
SSBP3-202ENST00000357475 COTL1Q14019 142 aa17.4■□□□□ 0.38
SSBP3-202ENST00000357475 LELP1Q5T871 98 aa17.39■□□□□ 0.37
SSBP3-202ENST00000357475 WFDC10BQ8IUB3 73 aa17.38■□□□□ 0.37
SSBP3-202ENST00000357475 Q8N8P6 123 aa17.38■□□□□ 0.37
SSBP3-202ENST00000357475 MRPS16Q9Y3D3 137 aaKnown RBP17.38■□□□□ 0.37
SSBP3-202ENST00000357475 UBE2DNLQ8IWF7 75 aa17.37■□□□□ 0.37
SSBP3-202ENST00000357475 URB1-AS1Q96HZ7 61 aa17.37■□□□□ 0.37
SSBP3-202ENST00000357475 CHCHD7Q9BUK0 85 aa17.37■□□□□ 0.37
SSBP3-202ENST00000357475 SACSQ9NZJ4 4579 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms