RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 PMCHL2Q9BQD1 86 aa5.02□□□□□ -1.61
TRIM55-203ENST00000350034 SNHG12Q9BXW3 62 aa5.02□□□□□ -1.61
TRIM55-203ENST00000350034 XCL2Q9UBD3 114 aa5.02□□□□□ -1.61
TRIM55-203ENST00000350034 MRPS16Q9Y3D3 137 aaKnown RBP5.02□□□□□ -1.61
TRIM55-203ENST00000350034 GOLT1BQ9Y3E0 138 aa5.02□□□□□ -1.61
TRIM55-203ENST00000350034 EPPK1P58107 5090 aaKnown RBP5.01□□□□□ -1.61
TRIM55-203ENST00000350034 TRAV12-1A0A0B4J245 112 aa5.01□□□□□ -1.61
TRIM55-203ENST00000350034 LINC01549A6NIU2 74 aa5.01□□□□□ -1.61
TRIM55-203ENST00000350034 HSBP1L1C9JCN9 74 aa5.01□□□□□ -1.61
TRIM55-203ENST00000350034 F5H697 171 aa5.01□□□□□ -1.61
TRIM55-203ENST00000350034 H0Y8G0 127 aa5.01□□□□□ -1.61
TRIM55-203ENST00000350034 M0R143 59 aa5.01□□□□□ -1.61
TRIM55-203ENST00000350034 EREGO14944 169 aa5.01□□□□□ -1.61
TRIM55-203ENST00000350034 RS1O15537 224 aa5.01□□□□□ -1.61
TRIM55-203ENST00000350034 NUDT3O95989 172 aa5.01□□□□□ -1.61
TRIM55-203ENST00000350034 PRM2P04554 102 aa5.01□□□□□ -1.61
TRIM55-203ENST00000350034 NUTF2P61970 127 aaKnown RBP5.01□□□□□ -1.61
TRIM55-203ENST00000350034 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.01□□□□□ -1.61
TRIM55-203ENST00000350034 RNASE8Q8TDE3 154 aaKnown RBP5.01□□□□□ -1.61
TRIM55-203ENST00000350034 C18orf15Q96N68 181 aa5.01□□□□□ -1.61
TRIM55-203ENST00000350034 CITED1Q99966 193 aa5.01□□□□□ -1.61
TRIM55-203ENST00000350034 DKK2Q9UBU2 259 aa5.01□□□□□ -1.61
TRIM55-203ENST00000350034 A0A087WX48 190 aa5□□□□□ -1.61
TRIM55-203ENST00000350034 SDHAF1A6NFY7 115 aa5□□□□□ -1.61
TRIM55-203ENST00000350034 RHODO00212 210 aa5□□□□□ -1.61
TRIM55-203ENST00000350034 PF4P02776 101 aa5□□□□□ -1.61
TRIM55-203ENST00000350034 COX8AP10176 69 aa5□□□□□ -1.61
TRIM55-203ENST00000350034 AZU1P20160 251 aa5□□□□□ -1.61
TRIM55-203ENST00000350034 G0S2P27469 103 aa5□□□□□ -1.61
TRIM55-203ENST00000350034 INSL3P51460 131 aa5□□□□□ -1.61
TRIM55-203ENST00000350034 HNRNPA3P51991 378 aaKnown RBP5□□□□□ -1.61
TRIM55-203ENST00000350034 RHOHQ15669 191 aa5□□□□□ -1.61
TRIM55-203ENST00000350034 ZNF56Q15929 161 aa5□□□□□ -1.61
TRIM55-203ENST00000350034 ANKRD39Q53RE8 183 aa5□□□□□ -1.61
TRIM55-203ENST00000350034 FAM74A4Q5TZK3 123 aa5□□□□□ -1.61
TRIM55-203ENST00000350034 CFAP126Q5VTH2 177 aa5□□□□□ -1.61
TRIM55-203ENST00000350034 C2orf66Q6UXQ4 117 aa5□□□□□ -1.61
TRIM55-203ENST00000350034 ZFP2Q6ZN57 461 aa5□□□□□ -1.61
TRIM55-203ENST00000350034 Q6ZN92 141 aa5□□□□□ -1.61
TRIM55-203ENST00000350034 NEGR1Q7Z3B1 354 aa5□□□□□ -1.61
TRIM55-203ENST00000350034 NEXN-AS1Q8NBZ9 246 aa5□□□□□ -1.61
TRIM55-203ENST00000350034 CSNK1G2-AS1Q8NCQ2 148 aa5□□□□□ -1.61
TRIM55-203ENST00000350034 HHLA3Q9XRX5 114 aa5□□□□□ -1.61
TRIM55-203ENST00000350034 SORL1Q92673 2214 aa5□□□□□ -1.61
TRIM55-203ENST00000350034 MGAM2Q2M2H8 2515 aa4.99□□□□□ -1.61
TRIM55-203ENST00000350034 PLAC8L1A1L4L8 177 aa4.99□□□□□ -1.61
TRIM55-203ENST00000350034 IGIPA6NJ69 53 aa4.99□□□□□ -1.61
TRIM55-203ENST00000350034 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.99□□□□□ -1.61
TRIM55-203ENST00000350034 H7C1H1 209 aa4.99□□□□□ -1.61
TRIM55-203ENST00000350034 TSHBP01222 138 aa4.99□□□□□ -1.61
TRIM55-203ENST00000350034 IGHV3-53P01767 116 aa4.99□□□□□ -1.61
TRIM55-203ENST00000350034 PRSS1P07477 247 aa4.99□□□□□ -1.61
TRIM55-203ENST00000350034 FGF6P10767 208 aa4.99□□□□□ -1.61
TRIM55-203ENST00000350034 HTN1P15515 57 aa4.99□□□□□ -1.61
TRIM55-203ENST00000350034 DAZ2Q13117 558 aaKnown RBP4.99□□□□□ -1.61
TRIM55-203ENST00000350034 SLC25A34Q6PIV7 304 aa4.99□□□□□ -1.61
TRIM55-203ENST00000350034 Q6ZSN1 163 aa4.99□□□□□ -1.61
TRIM55-203ENST00000350034 ERASQ7Z444 233 aa4.99□□□□□ -1.61
TRIM55-203ENST00000350034 TMEM263Q8WUH6 116 aaKnown RBP4.99□□□□□ -1.61
TRIM55-203ENST00000350034 SCGB3A1Q96QR1 104 aa4.99□□□□□ -1.61
TRIM55-203ENST00000350034 KIR2DL4Q99706 377 aa4.99□□□□□ -1.61
TRIM55-203ENST00000350034 WFDC10AQ9H1F0 79 aa4.99□□□□□ -1.61
TRIM55-203ENST00000350034 CYSLTR1Q9Y271 337 aa4.99□□□□□ -1.61
TRIM55-203ENST00000350034 HYDINQ4G0P3 5121 aa4.99□□□□□ -1.61
TRIM55-203ENST00000350034 I3L3M4 83 aa4.98□□□□□ -1.61
TRIM55-203ENST00000350034 DLEU1O43261 78 aa4.98□□□□□ -1.61
TRIM55-203ENST00000350034 DPM2O94777 84 aa4.98□□□□□ -1.61
TRIM55-203ENST00000350034 IGKCP01834 107 aa4.98□□□□□ -1.61
TRIM55-203ENST00000350034 P0DMU3 169 aa4.98□□□□□ -1.61
TRIM55-203ENST00000350034 FAM231AP0DMU4 169 aa4.98□□□□□ -1.61
TRIM55-203ENST00000350034 FAM231CP0DMU5 169 aa4.98□□□□□ -1.61
TRIM55-203ENST00000350034 C9orf66Q5T8R8 295 aa4.98□□□□□ -1.61
TRIM55-203ENST00000350034 STPG4Q8N801 248 aa4.98□□□□□ -1.61
TRIM55-203ENST00000350034 WFDC9Q8NEX5 89 aa4.98□□□□□ -1.61
TRIM55-203ENST00000350034 BAALCQ8WXS3 180 aa4.98□□□□□ -1.61
TRIM55-203ENST00000350034 TMEM141Q96I45 108 aa4.98□□□□□ -1.61
TRIM55-203ENST00000350034 DNAJC30Q96LL9 226 aa4.98□□□□□ -1.61
TRIM55-203ENST00000350034 TIMM17AQ99595 171 aa4.98□□□□□ -1.61
TRIM55-203ENST00000350034 C1QTNF4Q9BXJ3 329 aa4.98□□□□□ -1.61
TRIM55-203ENST00000350034 MRPL16Q9NX20 251 aaKnown RBP4.98□□□□□ -1.61
TRIM55-203ENST00000350034 MRPL35Q9NZE8 188 aaKnown RBP4.98□□□□□ -1.61
TRIM55-203ENST00000350034 F8VRH5 84 aa4.97□□□□□ -1.61
TRIM55-203ENST00000350034 RPL35AP18077 110 aaKnown RBP4.97□□□□□ -1.61
TRIM55-203ENST00000350034 C2orf91Q6ZV80 131 aa4.97□□□□□ -1.61
TRIM55-203ENST00000350034 BOD1L2Q8IYS8 172 aa4.97□□□□□ -1.61
TRIM55-203ENST00000350034 C20orf203Q8NBC4 194 aa4.97□□□□□ -1.61
TRIM55-203ENST00000350034 OVOL2Q9BRP0 275 aa4.97□□□□□ -1.61
TRIM55-203ENST00000350034 TMEM208Q9BTX3 173 aa4.97□□□□□ -1.61
TRIM55-203ENST00000350034 TP53TG1Q9Y2A0 90 aa4.97□□□□□ -1.61
TRIM55-203ENST00000350034 IGHV3OR16-12A0A075B7B8 117 aa4.96□□□□□ -1.62
TRIM55-203ENST00000350034 IGHV3-73A0A0B4J1V6 119 aa4.96□□□□□ -1.62
TRIM55-203ENST00000350034 TRAV4A0A0B4J268 109 aa4.96□□□□□ -1.62
TRIM55-203ENST00000350034 PRSS29PA6NIE9 313 aa4.96□□□□□ -1.62
TRIM55-203ENST00000350034 SIVA1O15304 175 aa4.96□□□□□ -1.62
TRIM55-203ENST00000350034 PLNP26678 52 aa4.96□□□□□ -1.62
TRIM55-203ENST00000350034 C16orf74Q96GX8 76 aa4.96□□□□□ -1.62
TRIM55-203ENST00000350034 TP73-AS1Q9UF72 201 aa4.96□□□□□ -1.62
TRIM55-203ENST00000350034 Q9UF83 564 aa4.96□□□□□ -1.62
TRIM55-203ENST00000350034 CHTOPQ9Y3Y2 248 aaKnown RBP4.96□□□□□ -1.62
TRIM55-203ENST00000350034 IGKV2D-26A0A0A0MRZ7 120 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms