RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 CKS2P33552 79 aa6.82□□□□□ -1.32
ATG4A-202ENST00000345734 IFI27P40305 119 aaPredicted RBP6.82□□□□□ -1.32
ATG4A-202ENST00000345734 LEPP41159 167 aa6.82□□□□□ -1.32
ATG4A-202ENST00000345734 ASIPP42127 132 aa6.82□□□□□ -1.32
ATG4A-202ENST00000345734 SPINK13Q1W4C9 94 aa6.82□□□□□ -1.32
ATG4A-202ENST00000345734 SPANXN1Q5VSR9 72 aa6.82□□□□□ -1.32
ATG4A-202ENST00000345734 CHCHD1Q96BP2 118 aaKnown RBP6.82□□□□□ -1.32
ATG4A-202ENST00000345734 ODF3Q96PU9 254 aa6.82□□□□□ -1.32
ATG4A-202ENST00000345734 IGHV4-4A0A075B6R2 117 aa6.82□□□□□ -1.32
ATG4A-202ENST00000345734 IGHV1-24A0A0C4DH33 117 aa6.82□□□□□ -1.32
ATG4A-202ENST00000345734 M0R381 172 aa6.82□□□□□ -1.32
ATG4A-202ENST00000345734 PAX4O43316 350 aa6.82□□□□□ -1.32
ATG4A-202ENST00000345734 NPYP01303 97 aa6.82□□□□□ -1.32
ATG4A-202ENST00000345734 RNASE3P12724 160 aaKnown RBP6.82□□□□□ -1.32
ATG4A-202ENST00000345734 GATA1P15976 413 aaPredicted RBP6.82□□□□□ -1.32
ATG4A-202ENST00000345734 PROK1P58294 105 aa6.82□□□□□ -1.32
ATG4A-202ENST00000345734 FXYD7P58549 80 aa6.82□□□□□ -1.32
ATG4A-202ENST00000345734 CACNG7P62955 275 aa6.82□□□□□ -1.32
ATG4A-202ENST00000345734 AMTNQ6UX39 209 aa6.82□□□□□ -1.32
ATG4A-202ENST00000345734 SIGLEC8Q9NYZ4 499 aa6.82□□□□□ -1.32
ATG4A-202ENST00000345734 SPCS1Q9Y6A9 102 aa6.82□□□□□ -1.32
ATG4A-202ENST00000345734 VWFP04275 2813 aa6.81□□□□□ -1.32
ATG4A-202ENST00000345734 TENM1Q9UKZ4 2725 aa6.81□□□□□ -1.32
ATG4A-202ENST00000345734 DUSP14O95147 198 aaKnown RBP6.81□□□□□ -1.32
ATG4A-202ENST00000345734 BEAN1Q3B7T3 259 aa6.81□□□□□ -1.32
ATG4A-202ENST00000345734 NSUN5P1Q3KNT7 163 aa6.81□□□□□ -1.32
ATG4A-202ENST00000345734 TMEM97Q5BJF2 176 aa6.81□□□□□ -1.32
ATG4A-202ENST00000345734 LINC00173Q6ZV60 143 aa6.81□□□□□ -1.32
ATG4A-202ENST00000345734 PTH2Q96A98 100 aa6.81□□□□□ -1.32
ATG4A-202ENST00000345734 RNF183Q96D59 192 aa6.81□□□□□ -1.32
ATG4A-202ENST00000345734 SCRT2Q9NQ03 307 aa6.81□□□□□ -1.32
ATG4A-202ENST00000345734 TRAV2A0A0B4J234 112 aa6.8□□□□□ -1.32
ATG4A-202ENST00000345734 CRXO43186 299 aaPredicted RBP6.8□□□□□ -1.32
ATG4A-202ENST00000345734 KRTAP10-3P60369 221 aa6.8□□□□□ -1.32
ATG4A-202ENST00000345734 FAM159AQ6UWV7 190 aa6.8□□□□□ -1.32
ATG4A-202ENST00000345734 PRSS3P2Q8NHM4 247 aa6.8□□□□□ -1.32
ATG4A-202ENST00000345734 ANAPC13Q9BS18 74 aa6.8□□□□□ -1.32
ATG4A-202ENST00000345734 MAP6D1Q9H9H5 199 aa6.8□□□□□ -1.32
ATG4A-202ENST00000345734 ZNF256Q9Y2P7 627 aaPredicted RBP6.8□□□□□ -1.32
ATG4A-202ENST00000345734 PHLDA3Q9Y5J5 127 aa6.8□□□□□ -1.32
ATG4A-202ENST00000345734 TRAV26-2A0A0B4J265 109 aa6.8□□□□□ -1.32
ATG4A-202ENST00000345734 A0A1W2PPM0 123 aa6.8□□□□□ -1.32
ATG4A-202ENST00000345734 RBMY1BA6NDE4 496 aaKnown RBP6.8□□□□□ -1.32
ATG4A-202ENST00000345734 RBMY1EA6NEQ0 496 aaKnown RBP6.8□□□□□ -1.32
ATG4A-202ENST00000345734 F8W1H4 67 aa6.8□□□□□ -1.32
ATG4A-202ENST00000345734 RBMY1DP0C7P1 496 aaKnown RBP6.8□□□□□ -1.32
ATG4A-202ENST00000345734 FABP2P12104 132 aa6.8□□□□□ -1.32
ATG4A-202ENST00000345734 H3BMM0 161 aa6.79□□□□□ -1.32
ATG4A-202ENST00000345734 CD7P09564 240 aa6.79□□□□□ -1.32
ATG4A-202ENST00000345734 HLA-DRB4P13762 266 aa6.79□□□□□ -1.32
ATG4A-202ENST00000345734 TIRAPP58753 221 aa6.79□□□□□ -1.32
ATG4A-202ENST00000345734 HLA-DRB4X5D2U9 266 aa6.79□□□□□ -1.32
ATG4A-202ENST00000345734 F8P00451 2351 aa6.79□□□□□ -1.32
ATG4A-202ENST00000345734 RBMY1A1P0DJD3 496 aaKnown RBP6.79□□□□□ -1.32
ATG4A-202ENST00000345734 RBMY1CP0DJD4 496 aa6.79□□□□□ -1.32
ATG4A-202ENST00000345734 RBMY1FQ15415 496 aaKnown RBP6.79□□□□□ -1.32
ATG4A-202ENST00000345734 SPATA12Q7Z6I5 190 aa6.79□□□□□ -1.32
ATG4A-202ENST00000345734 SPAG8Q99932 426 aaPredicted RBP6.79□□□□□ -1.32
ATG4A-202ENST00000345734 SPANXB1Q9NS25 103 aaPredicted RBP6.79□□□□□ -1.32
ATG4A-202ENST00000345734 MDFICQ9P1T7 246 aa6.79□□□□□ -1.32
ATG4A-202ENST00000345734 NOTCH3Q9UM47 2321 aa6.78□□□□□ -1.32
ATG4A-202ENST00000345734 OR4C46A6NHA9 309 aa6.78□□□□□ -1.32
ATG4A-202ENST00000345734 H3BUT2 72 aa6.78□□□□□ -1.32
ATG4A-202ENST00000345734 DGAT2L7PQ6IED9 249 aa6.78□□□□□ -1.32
ATG4A-202ENST00000345734 C14orf178Q8N769 122 aaPredicted RBP6.78□□□□□ -1.32
ATG4A-202ENST00000345734 TMEM70Q9BUB7 260 aa6.78□□□□□ -1.32
ATG4A-202ENST00000345734 C1QTNF4Q9BXJ3 329 aa6.78□□□□□ -1.32
ATG4A-202ENST00000345734 TRRAPQ9Y4A5 3859 aa6.78□□□□□ -1.32
ATG4A-202ENST00000345734 IGHV1OR15-1A0A075B7D0 117 aa6.77□□□□□ -1.33
ATG4A-202ENST00000345734 A0A096LNJ9 63 aa6.77□□□□□ -1.33
ATG4A-202ENST00000345734 IGHV3-16A0A0C4DH30 117 aa6.77□□□□□ -1.33
ATG4A-202ENST00000345734 KRTAP23-1A1A580 65 aa6.77□□□□□ -1.33
ATG4A-202ENST00000345734 A8MTW9 85 aa6.77□□□□□ -1.33
ATG4A-202ENST00000345734 LEPROTL1O95214 131 aa6.77□□□□□ -1.33
ATG4A-202ENST00000345734 ODF3L2Q3SX64 289 aa6.77□□□□□ -1.33
ATG4A-202ENST00000345734 XP32Q5T750 250 aa6.77□□□□□ -1.33
ATG4A-202ENST00000345734 ATOH7Q8N100 152 aa6.77□□□□□ -1.33
ATG4A-202ENST00000345734 NRACQ8N912 160 aa6.77□□□□□ -1.33
ATG4A-202ENST00000345734 ATRQ13535 2644 aa6.77□□□□□ -1.33
ATG4A-202ENST00000345734 NXPH4O95158 308 aa6.77□□□□□ -1.33
ATG4A-202ENST00000345734 SPINK8P0C7L1 97 aa6.77□□□□□ -1.33
ATG4A-202ENST00000345734 MAP1LC3AQ9H492 121 aa6.77□□□□□ -1.33
ATG4A-202ENST00000345734 PRM2P04554 102 aa6.76□□□□□ -1.33
ATG4A-202ENST00000345734 DPH3P1Q9H4G8 78 aa6.76□□□□□ -1.33
ATG4A-202ENST00000345734 JPT2Q9H910 190 aa6.76□□□□□ -1.33
ATG4A-202ENST00000345734 TEP1Q99973 2627 aaKnown RBP6.76□□□□□ -1.33
ATG4A-202ENST00000345734 MGPP08493 103 aa6.76□□□□□ -1.33
ATG4A-202ENST00000345734 COX8AP10176 69 aa6.76□□□□□ -1.33
ATG4A-202ENST00000345734 ATP6V0E2Q8NHE4 81 aa6.76□□□□□ -1.33
ATG4A-202ENST00000345734 IL17DQ8TAD2 202 aa6.76□□□□□ -1.33
ATG4A-202ENST00000345734 C9orf85Q96MD7 179 aa6.76□□□□□ -1.33
ATG4A-202ENST00000345734 A0A087WX48 190 aa6.75□□□□□ -1.33
ATG4A-202ENST00000345734 GAGE12JA6NER3 117 aa6.75□□□□□ -1.33
ATG4A-202ENST00000345734 M0QXV9 152 aa6.75□□□□□ -1.33
ATG4A-202ENST00000345734 GAGE7O76087 117 aa6.75□□□□□ -1.33
ATG4A-202ENST00000345734 GAGE12FP0CL80 117 aa6.75□□□□□ -1.33
ATG4A-202ENST00000345734 GAGE12GP0CL81 117 aa6.75□□□□□ -1.33
ATG4A-202ENST00000345734 GAGE12IP0CL82 117 aa6.75□□□□□ -1.33
ATG4A-202ENST00000345734 HTN1P15515 57 aa6.75□□□□□ -1.33
ATG4A-202ENST00000345734 GAGE4Q13068 117 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms