RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 UTP20O75691 2785 aaKnown RBP13.26□□□□□ -0.29
VHL-202ENST00000345392 RPL32P62910 135 aaKnown RBP13.26□□□□□ -0.29
VHL-202ENST00000345392 VCX2Q9H322 139 aa13.26□□□□□ -0.29
VHL-202ENST00000345392 MOB4Q9Y3A3 225 aa13.26□□□□□ -0.29
VHL-202ENST00000345392 ZFAND6Q6FIF0 208 aa13.25□□□□□ -0.29
VHL-202ENST00000345392 TRBV27A0A0K0K1C4 114 aa13.25□□□□□ -0.29
VHL-202ENST00000345392 TEX29Q8N6K0 151 aa13.25□□□□□ -0.29
VHL-202ENST00000345392 TMEM263Q8WUH6 116 aaKnown RBP13.25□□□□□ -0.29
VHL-202ENST00000345392 BEX4Q9NWD9 120 aaPredicted RBP13.25□□□□□ -0.29
VHL-202ENST00000345392 ZNF56Q15929 161 aa13.24□□□□□ -0.29
VHL-202ENST00000345392 Q1RN00 199 aa13.24□□□□□ -0.29
VHL-202ENST00000345392 SVIPQ8NHG7 77 aa13.24□□□□□ -0.29
VHL-202ENST00000345392 FAM208BQ5VWN6 2430 aa13.23□□□□□ -0.29
VHL-202ENST00000345392 SORL1Q92673 2214 aa13.23□□□□□ -0.29
VHL-202ENST00000345392 KLLNB2CW77 178 aa13.23□□□□□ -0.29
VHL-202ENST00000345392 IGKV3-20P01619 116 aa13.23□□□□□ -0.29
VHL-202ENST00000345392 IGHV4-39P01824 125 aa13.23□□□□□ -0.29
VHL-202ENST00000345392 GNLYP22749 145 aa13.23□□□□□ -0.29
VHL-202ENST00000345392 MDFICQ9P1T7 246 aa13.23□□□□□ -0.29
VHL-202ENST00000345392 CSPG4Q6UVK1 2322 aa13.23□□□□□ -0.29
VHL-202ENST00000345392 TMEM223A0PJW6 202 aa13.23□□□□□ -0.29
VHL-202ENST00000345392 ADARB2-AS1A8MUL3 147 aa13.23□□□□□ -0.29
VHL-202ENST00000345392 TMEM262E9PQX1 116 aa13.23□□□□□ -0.29
VHL-202ENST00000345392 NTN5Q8WTR8 489 aaPredicted RBP13.23□□□□□ -0.29
VHL-202ENST00000345392 TRAV12-2A0A075B6T6 113 aa13.22□□□□□ -0.29
VHL-202ENST00000345392 PF4V1P10720 104 aa13.22□□□□□ -0.29
VHL-202ENST00000345392 A0A0J9YXV3 536 aa13.22□□□□□ -0.29
VHL-202ENST00000345392 LEPROTO15243 131 aa13.22□□□□□ -0.29
VHL-202ENST00000345392 SS18L2Q9UHA2 77 aa13.22□□□□□ -0.29
VHL-202ENST00000345392 CRLF1O75462 422 aa13.21□□□□□ -0.29
VHL-202ENST00000345392 P0DMU3 169 aa13.21□□□□□ -0.29
VHL-202ENST00000345392 FAM231AP0DMU4 169 aa13.21□□□□□ -0.29
VHL-202ENST00000345392 FAM231CP0DMU5 169 aa13.21□□□□□ -0.29
VHL-202ENST00000345392 LGALS9O00182 355 aa13.2□□□□□ -0.3
VHL-202ENST00000345392 ZNF22P17026 224 aaPredicted RBP13.2□□□□□ -0.3
VHL-202ENST00000345392 CITED1Q99966 193 aa13.2□□□□□ -0.3
VHL-202ENST00000345392 TRAV4A0A0B4J268 109 aa13.2□□□□□ -0.3
VHL-202ENST00000345392 M0QY20 66 aa13.2□□□□□ -0.3
VHL-202ENST00000345392 Q8N1Y9 231 aa13.2□□□□□ -0.3
VHL-202ENST00000345392 KMT2BQ9UMN6 2715 aaPredicted RBP13.2□□□□□ -0.3
VHL-202ENST00000345392 TEX49A0A1B0GTD5 131 aa13.19□□□□□ -0.3
VHL-202ENST00000345392 RHODO00212 210 aa13.19□□□□□ -0.3
VHL-202ENST00000345392 IGHV4-38-2P0DP08 117 aa13.19□□□□□ -0.3
VHL-202ENST00000345392 TRBV7-9A0A0J9YWB2 115 aa13.19□□□□□ -0.3
VHL-202ENST00000345392 TRBV6-5A0A0K0K1A5 114 aa13.18□□□□□ -0.3
VHL-202ENST00000345392 SPXQ9BT56 116 aa13.18□□□□□ -0.3
VHL-202ENST00000345392 A0A0B4J2C4 111 aa13.18□□□□□ -0.3
VHL-202ENST00000345392 NHLRC4P0CG21 123 aaPredicted RBP13.18□□□□□ -0.3
VHL-202ENST00000345392 BLCAPP62952 87 aa13.18□□□□□ -0.3
VHL-202ENST00000345392 CUBNO60494 3623 aa13.18□□□□□ -0.3
VHL-202ENST00000345392 B5MCH6 92 aa13.17□□□□□ -0.3
VHL-202ENST00000345392 LINC01620Q4KN68 170 aa13.17□□□□□ -0.3
VHL-202ENST00000345392 DAZ1Q9NQZ3 744 aaKnown RBP13.17□□□□□ -0.3
VHL-202ENST00000345392 USP9XQ93008 2570 aaPredicted RBP13.17□□□□□ -0.3
VHL-202ENST00000345392 DOPEY2Q9Y3R5 2298 aa13.17□□□□□ -0.3
VHL-202ENST00000345392 IGHV3-16A0A0C4DH30 117 aa13.17□□□□□ -0.3
VHL-202ENST00000345392 IGHV4-61A0A0C4DH41 118 aa13.17□□□□□ -0.3
VHL-202ENST00000345392 SNCGO76070 127 aa13.16□□□□□ -0.3
VHL-202ENST00000345392 IGHV1-69P01742 117 aa13.16□□□□□ -0.3
VHL-202ENST00000345392 PRSS2P07478 247 aa13.16□□□□□ -0.3
VHL-202ENST00000345392 GAGE2BQ13066 116 aa13.16□□□□□ -0.3
VHL-202ENST00000345392 GAGE2EQ4V326 116 aa13.16□□□□□ -0.3
VHL-202ENST00000345392 GAGE2DQ9UEU5 116 aa13.16□□□□□ -0.3
VHL-202ENST00000345392 A0A0J9YXY3 114 aa13.16□□□□□ -0.3
VHL-202ENST00000345392 ATXN8Q156A1 80 aa13.16□□□□□ -0.3
VHL-202ENST00000345392 NSUN5P1Q3KNT7 163 aa13.16□□□□□ -0.3
VHL-202ENST00000345392 ZNF843Q8N446 348 aa13.16□□□□□ -0.3
VHL-202ENST00000345392 C20orf203Q8NBC4 194 aa13.16□□□□□ -0.3
VHL-202ENST00000345392 USMG5Q96IX5 58 aa13.16□□□□□ -0.3
VHL-202ENST00000345392 ZANQ9Y493 2812 aa13.16□□□□□ -0.3
VHL-202ENST00000345392 TRIAP1O43715 76 aa13.16□□□□□ -0.3
VHL-202ENST00000345392 DCANP1Q8TF63 244 aa13.16□□□□□ -0.3
VHL-202ENST00000345392 IGLV4-3A0A075B6K6 122 aa13.15□□□□□ -0.3
VHL-202ENST00000345392 M0R2P5 195 aa13.15□□□□□ -0.3
VHL-202ENST00000345392 GAGE5Q13069 117 aa13.15□□□□□ -0.3
VHL-202ENST00000345392 GAGE6Q13070 117 aa13.15□□□□□ -0.3
VHL-202ENST00000345392 PRRC2AP48634 2157 aaKnown RBP13.15□□□□□ -0.3
VHL-202ENST00000345392 TRAV8-3A0A0A6YYJ7 113 aa13.15□□□□□ -0.31
VHL-202ENST00000345392 H3BUX3 64 aa13.15□□□□□ -0.31
VHL-202ENST00000345392 NPC2P61916 151 aa13.15□□□□□ -0.31
VHL-202ENST00000345392 TMEM95Q3KNT9 176 aa13.15□□□□□ -0.31
VHL-202ENST00000345392 RNASE13Q5GAN3 156 aaKnown RBP13.15□□□□□ -0.31
VHL-202ENST00000345392 C9orf85Q96MD7 179 aa13.15□□□□□ -0.31
VHL-202ENST00000345392 IGHV3-30-3P0DP02 117 aa13.14□□□□□ -0.31
VHL-202ENST00000345392 RHOHQ15669 191 aa13.14□□□□□ -0.31
VHL-202ENST00000345392 CEMP1Q6PRD7 247 aaPredicted RBP13.14□□□□□ -0.31
VHL-202ENST00000345392 Q6ZSV7 163 aa13.14□□□□□ -0.31
VHL-202ENST00000345392 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.14□□□□□ -0.31
VHL-202ENST00000345392 ID1P41134 155 aa13.14□□□□□ -0.31
VHL-202ENST00000345392 CENPEQ02224 2701 aa13.13□□□□□ -0.31
VHL-202ENST00000345392 M0QXV9 152 aa13.13□□□□□ -0.31
VHL-202ENST00000345392 LRRK2Q5S007 2527 aa13.12□□□□□ -0.31
VHL-202ENST00000345392 IGHV3-73A0A0B4J1V6 119 aa13.12□□□□□ -0.31
VHL-202ENST00000345392 IGHG2P01859 326 aa13.12□□□□□ -0.31
VHL-202ENST00000345392 NDUFV3P56181 108 aaKnown RBP13.12□□□□□ -0.31
VHL-202ENST00000345392 SPINK13Q1W4C9 94 aa13.12□□□□□ -0.31
VHL-202ENST00000345392 ADAMTSL4-AS1Q5T5F5 129 aa13.12□□□□□ -0.31
VHL-202ENST00000345392 A8MZ25 164 aa13.12□□□□□ -0.31
VHL-202ENST00000345392 I3L3M4 83 aa13.12□□□□□ -0.31
VHL-202ENST00000345392 ODF3Q96PU9 254 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms