RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 FHL2Q14192 279 aa9.8□□□□□ -0.84
PMS1-201ENST00000342075 C12orf74Q32Q52 190 aa9.8□□□□□ -0.84
PMS1-201ENST00000342075 OR10J3Q5JRS4 329 aa9.8□□□□□ -0.84
PMS1-201ENST00000342075 RNASEKQ6P5S7 137 aaKnown RBP9.8□□□□□ -0.84
PMS1-201ENST00000342075 MRAP2Q96G30 205 aa9.8□□□□□ -0.84
PMS1-201ENST00000342075 LYRM9A8MSI8 78 aa9.79□□□□□ -0.84
PMS1-201ENST00000342075 PIK3CD-AS1Q5SR53 167 aa9.79□□□□□ -0.84
PMS1-201ENST00000342075 TRGV4A0A0C4DH28 118 aa9.79□□□□□ -0.84
PMS1-201ENST00000342075 IGHV3-38A0A0C4DH36 116 aa9.79□□□□□ -0.84
PMS1-201ENST00000342075 S100A6P06703 90 aa9.79□□□□□ -0.84
PMS1-201ENST00000342075 SPART-AS1P0CW21 52 aa9.79□□□□□ -0.84
PMS1-201ENST00000342075 Q6ZTC4 211 aa9.79□□□□□ -0.84
PMS1-201ENST00000342075 FAM19A2Q8N3H0 131 aa9.79□□□□□ -0.84
PMS1-201ENST00000342075 A0A0J9YY99 117 aa9.78□□□□□ -0.84
PMS1-201ENST00000342075 TCAPO15273 167 aa9.78□□□□□ -0.84
PMS1-201ENST00000342075 NIT1Q86X76 327 aa9.78□□□□□ -0.84
PMS1-201ENST00000342075 B9D2Q9BPU9 175 aa9.78□□□□□ -0.84
PMS1-201ENST00000342075 TENM2Q9NT68 2774 aa9.78□□□□□ -0.84
PMS1-201ENST00000342075 NEXN-AS1Q8NBZ9 246 aa9.77□□□□□ -0.84
PMS1-201ENST00000342075 IFITM10A6NMD0 228 aa9.77□□□□□ -0.85
PMS1-201ENST00000342075 PHLDA1Q8WV24 401 aaPredicted RBP9.77□□□□□ -0.85
PMS1-201ENST00000342075 RHODO00212 210 aa9.77□□□□□ -0.85
PMS1-201ENST00000342075 PPBPP02775 128 aa9.77□□□□□ -0.85
PMS1-201ENST00000342075 SUMO2P61956 95 aaKnown RBP9.77□□□□□ -0.85
PMS1-201ENST00000342075 Q0VG73 95 aa9.77□□□□□ -0.85
PMS1-201ENST00000342075 ZFP2Q6ZN57 461 aa9.77□□□□□ -0.85
PMS1-201ENST00000342075 C5orf52A6NGY3 159 aa9.76□□□□□ -0.85
PMS1-201ENST00000342075 PRSS3P2Q8NHM4 247 aa9.76□□□□□ -0.85
PMS1-201ENST00000342075 ZMAT4Q9H898 229 aa9.76□□□□□ -0.85
PMS1-201ENST00000342075 A0A096LPF7 62 aa9.76□□□□□ -0.85
PMS1-201ENST00000342075 GAGE12JA6NER3 117 aa9.76□□□□□ -0.85
PMS1-201ENST00000342075 SDHAF1A6NFY7 115 aa9.76□□□□□ -0.85
PMS1-201ENST00000342075 F5H768 121 aa9.76□□□□□ -0.85
PMS1-201ENST00000342075 GAGE1Q13065 139 aa9.76□□□□□ -0.85
PMS1-201ENST00000342075 GAGE4Q13068 117 aa9.76□□□□□ -0.85
PMS1-201ENST00000342075 GAGE5Q13069 117 aa9.76□□□□□ -0.85
PMS1-201ENST00000342075 GAGE13Q4V321 117 aa9.76□□□□□ -0.85
PMS1-201ENST00000342075 C11orf68Q9H3H3 251 aaKnown RBP9.76□□□□□ -0.85
PMS1-201ENST00000342075 IGLV2-18A0A075B6J9 118 aa9.75□□□□□ -0.85
PMS1-201ENST00000342075 K7EQD1 137 aa9.75□□□□□ -0.85
PMS1-201ENST00000342075 PMCHP20382 165 aa9.75□□□□□ -0.85
PMS1-201ENST00000342075 TMEM70Q9BUB7 260 aa9.75□□□□□ -0.85
PMS1-201ENST00000342075 MAP1LC3AQ9H492 121 aa9.75□□□□□ -0.85
PMS1-201ENST00000342075 ZNRF2Q8NHG8 242 aa9.75□□□□□ -0.85
PMS1-201ENST00000342075 NIT2Q9NQR4 276 aa9.75□□□□□ -0.85
PMS1-201ENST00000342075 HHLA3Q9XRX5 114 aa9.75□□□□□ -0.85
PMS1-201ENST00000342075 NDUFAF3Q9BU61 184 aa9.74□□□□□ -0.85
PMS1-201ENST00000342075 SMIM2Q9BVW6 85 aa9.74□□□□□ -0.85
PMS1-201ENST00000342075 HIST3H2BBQ8N257 126 aa9.74□□□□□ -0.85
PMS1-201ENST00000342075 C11orf45Q8TAV5 145 aa9.74□□□□□ -0.85
PMS1-201ENST00000342075 ST20Q9HBF5 79 aa9.74□□□□□ -0.85
PMS1-201ENST00000342075 DNAH7Q8WXX0 4024 aa9.74□□□□□ -0.85
PMS1-201ENST00000342075 TRAV26-1A0A087WT03 109 aa9.74□□□□□ -0.85
PMS1-201ENST00000342075 LINC00614P0C842 121 aa9.74□□□□□ -0.85
PMS1-201ENST00000342075 VSIG2Q96IQ7 327 aa9.74□□□□□ -0.85
PMS1-201ENST00000342075 C18orf15Q96N68 181 aa9.73□□□□□ -0.85
PMS1-201ENST00000342075 ATP5G1P05496 136 aa9.73□□□□□ -0.85
PMS1-201ENST00000342075 POLR2KP53803 58 aaKnown RBP9.73□□□□□ -0.85
PMS1-201ENST00000342075 COA6Q5JTJ3 125 aaKnown RBP9.73□□□□□ -0.85
PMS1-201ENST00000342075 A0A096LNJ9 63 aa9.72□□□□□ -0.85
PMS1-201ENST00000342075 CRYBA4P53673 196 aa9.72□□□□□ -0.85
PMS1-201ENST00000342075 FA2HQ7L5A8 372 aa9.72□□□□□ -0.85
PMS1-201ENST00000342075 TNFRSF18Q9Y5U5 241 aa9.72□□□□□ -0.85
PMS1-201ENST00000342075 IGHV1-24A0A0C4DH33 117 aa9.72□□□□□ -0.85
PMS1-201ENST00000342075 LINC00173Q6ZV60 143 aa9.72□□□□□ -0.85
PMS1-201ENST00000342075 FABP4P15090 132 aa9.72□□□□□ -0.85
PMS1-201ENST00000342075 GYPEP15421 78 aa9.72□□□□□ -0.85
PMS1-201ENST00000342075 LAMTOR2Q9Y2Q5 125 aa9.72□□□□□ -0.85
PMS1-201ENST00000342075 AP5S1Q9NUS5 200 aa9.71□□□□□ -0.85
PMS1-201ENST00000342075 H7C1H1 209 aa9.71□□□□□ -0.86
PMS1-201ENST00000342075 Q8N8P6 123 aa9.71□□□□□ -0.86
PMS1-201ENST00000342075 STARD9Q9P2P6 4700 aa9.71□□□□□ -0.86
PMS1-201ENST00000342075 TRBV7-3A0A075B6L6 115 aa9.7□□□□□ -0.86
PMS1-201ENST00000342075 TRBV6-4A0A1B0GX49 114 aa9.7□□□□□ -0.86
PMS1-201ENST00000342075 HSBP1O75506 76 aa9.7□□□□□ -0.86
PMS1-201ENST00000342075 AMTP48728 403 aa9.7□□□□□ -0.86
PMS1-201ENST00000342075 HIST1H2BLQ99880 126 aa9.7□□□□□ -0.86
PMS1-201ENST00000342075 C20orf78Q9BR46 151 aa9.7□□□□□ -0.86
PMS1-201ENST00000342075 TRBV6-5A0A0K0K1A5 114 aa9.7□□□□□ -0.86
PMS1-201ENST00000342075 PAX4O43316 350 aa9.7□□□□□ -0.86
PMS1-201ENST00000342075 EDA2RQ9HAV5 297 aa9.7□□□□□ -0.86
PMS1-201ENST00000342075 LOC105371267A0A1B0GV96 52 aa9.69□□□□□ -0.86
PMS1-201ENST00000342075 TSHBP01222 138 aa9.69□□□□□ -0.86
PMS1-201ENST00000342075 PRO0255Q9UI72 69 aa9.69□□□□□ -0.86
PMS1-201ENST00000342075 RHOHQ15669 191 aa9.69□□□□□ -0.86
PMS1-201ENST00000342075 TRBV27A0A0K0K1C4 114 aa9.69□□□□□ -0.86
PMS1-201ENST00000342075 RPL39P62891 51 aaKnown RBP9.69□□□□□ -0.86
PMS1-201ENST00000342075 PRSS47A8MTI9 375 aa9.68□□□□□ -0.86
PMS1-201ENST00000342075 BTF3P20290 206 aaKnown RBP9.68□□□□□ -0.86
PMS1-201ENST00000342075 UBE2D3P61077 147 aa9.68□□□□□ -0.86
PMS1-201ENST00000342075 UBE2D2P62837 147 aa9.68□□□□□ -0.86
PMS1-201ENST00000342075 NXT2Q9NPJ8 142 aaKnown RBP9.68□□□□□ -0.86
PMS1-201ENST00000342075 RPL36AP83881 106 aaKnown RBP9.68□□□□□ -0.86
PMS1-201ENST00000342075 RPL36ALQ969Q0 106 aaKnown RBP9.68□□□□□ -0.86
PMS1-201ENST00000342075 DEFB131BA0A096LNP1 70 aa9.67□□□□□ -0.86
PMS1-201ENST00000342075 NTM-AS1Q6ZSK4 140 aa9.67□□□□□ -0.86
PMS1-201ENST00000342075 PRADC1Q9BSG0 188 aa9.67□□□□□ -0.86
PMS1-201ENST00000342075 VCYO14598 125 aa9.67□□□□□ -0.86
PMS1-201ENST00000342075 ESDP10768 282 aa9.67□□□□□ -0.86
PMS1-201ENST00000342075 S100A2P29034 98 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms