RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 X6R8D5 127 aa12.46□□□□□ -0.41
CLDN4-201ENST00000340958 GAGE12BA1L429 117 aa12.46□□□□□ -0.42
CLDN4-201ENST00000340958 A8MZ25 164 aa12.46□□□□□ -0.42
CLDN4-201ENST00000340958 GAGE7O76087 117 aa12.46□□□□□ -0.42
CLDN4-201ENST00000340958 GAGE12FP0CL80 117 aa12.46□□□□□ -0.42
CLDN4-201ENST00000340958 GAGE12GP0CL81 117 aa12.46□□□□□ -0.42
CLDN4-201ENST00000340958 GAGE12IP0CL82 117 aa12.46□□□□□ -0.42
CLDN4-201ENST00000340958 FAM19A2Q8N3H0 131 aa12.46□□□□□ -0.42
CLDN4-201ENST00000340958 PLAC8L1A1L4L8 177 aa12.45□□□□□ -0.42
CLDN4-201ENST00000340958 NXT2Q9NPJ8 142 aaKnown RBP12.45□□□□□ -0.42
CLDN4-201ENST00000340958 H7C1H1 209 aa12.44□□□□□ -0.42
CLDN4-201ENST00000340958 M0R143 59 aa12.44□□□□□ -0.42
CLDN4-201ENST00000340958 RS1O15537 224 aa12.44□□□□□ -0.42
CLDN4-201ENST00000340958 RNF183Q96D59 192 aa12.44□□□□□ -0.42
CLDN4-201ENST00000340958 IGHV3-53P01767 116 aa12.44□□□□□ -0.42
CLDN4-201ENST00000340958 SUMO2P61956 95 aaKnown RBP12.44□□□□□ -0.42
CLDN4-201ENST00000340958 PMCHL1Q16048 86 aa12.44□□□□□ -0.42
CLDN4-201ENST00000340958 URB1-AS1Q96HZ7 61 aa12.44□□□□□ -0.42
CLDN4-201ENST00000340958 OVOL2Q9BRP0 275 aa12.44□□□□□ -0.42
CLDN4-201ENST00000340958 ST20Q9HBF5 79 aa12.44□□□□□ -0.42
CLDN4-201ENST00000340958 C20orf78Q9BR46 151 aa12.43□□□□□ -0.42
CLDN4-201ENST00000340958 DEFB130BP0DP73 79 aa12.42□□□□□ -0.42
CLDN4-201ENST00000340958 DEFB130AP0DP74 79 aa12.42□□□□□ -0.42
CLDN4-201ENST00000340958 MIFP14174 115 aa12.42□□□□□ -0.42
CLDN4-201ENST00000340958 TRAV4A0A0B4J268 109 aa12.41□□□□□ -0.42
CLDN4-201ENST00000340958 M0QY20 66 aa12.41□□□□□ -0.42
CLDN4-201ENST00000340958 DEFB4AO15263 64 aa12.41□□□□□ -0.42
CLDN4-201ENST00000340958 TCAPO15273 167 aa12.41□□□□□ -0.42
CLDN4-201ENST00000340958 DEFB121Q5J5C9 76 aa12.41□□□□□ -0.42
CLDN4-201ENST00000340958 ZFP2Q6ZN57 461 aa12.41□□□□□ -0.42
CLDN4-201ENST00000340958 Q8N8P6 123 aa12.41□□□□□ -0.42
CLDN4-201ENST00000340958 Q8N976 141 aa12.41□□□□□ -0.42
CLDN4-201ENST00000340958 MIEN1Q9BRT3 115 aa12.41□□□□□ -0.42
CLDN4-201ENST00000340958 TGP01266 2768 aa12.41□□□□□ -0.42
CLDN4-201ENST00000340958 IGHV4-28A0A0C4DH34 117 aa12.41□□□□□ -0.42
CLDN4-201ENST00000340958 UFSP1Q6NVU6 142 aa12.41□□□□□ -0.42
CLDN4-201ENST00000340958 ZNF479Q96JC4 524 aa12.41□□□□□ -0.42
CLDN4-201ENST00000340958 IGHV1-24A0A0C4DH33 117 aa12.4□□□□□ -0.42
CLDN4-201ENST00000340958 SMIM2Q9BVW6 85 aa12.4□□□□□ -0.42
CLDN4-201ENST00000340958 PRSS47A8MTI9 375 aa12.39□□□□□ -0.43
CLDN4-201ENST00000340958 K7EIL1 84 aa12.39□□□□□ -0.43
CLDN4-201ENST00000340958 TNFRSF18Q9Y5U5 241 aa12.39□□□□□ -0.43
CLDN4-201ENST00000340958 MRAPQ8TCY5 172 aa12.39□□□□□ -0.43
CLDN4-201ENST00000340958 VAMP8Q9BV40 100 aa12.39□□□□□ -0.43
CLDN4-201ENST00000340958 FAM222AQ5U5X8 452 aa12.38□□□□□ -0.43
CLDN4-201ENST00000340958 TRGV4A0A0C4DH28 118 aa12.37□□□□□ -0.43
CLDN4-201ENST00000340958 SDHAF1A6NFY7 115 aa12.37□□□□□ -0.43
CLDN4-201ENST00000340958 LYRM9A8MSI8 78 aa12.37□□□□□ -0.43
CLDN4-201ENST00000340958 VCYO14598 125 aa12.37□□□□□ -0.43
CLDN4-201ENST00000340958 LAGE3Q14657 143 aa12.37□□□□□ -0.43
CLDN4-201ENST00000340958 Q6ZSN1 163 aa12.37□□□□□ -0.43
CLDN4-201ENST00000340958 KIR2DL4Q99706 377 aa12.37□□□□□ -0.43
CLDN4-201ENST00000340958 RETNQ9HD89 108 aa12.37□□□□□ -0.43
CLDN4-201ENST00000340958 TP53TG1Q9Y2A0 90 aa12.37□□□□□ -0.43
CLDN4-201ENST00000340958 PAM16Q9Y3D7 125 aa12.37□□□□□ -0.43
CLDN4-201ENST00000340958 CIDEAO60543 219 aa12.37□□□□□ -0.43
CLDN4-201ENST00000340958 LEPROTL1O95214 131 aa12.37□□□□□ -0.43
CLDN4-201ENST00000340958 P0DMU3 169 aa12.37□□□□□ -0.43
CLDN4-201ENST00000340958 FAM231AP0DMU4 169 aa12.37□□□□□ -0.43
CLDN4-201ENST00000340958 FAM231CP0DMU5 169 aa12.37□□□□□ -0.43
CLDN4-201ENST00000340958 NEGR1Q7Z3B1 354 aa12.37□□□□□ -0.43
CLDN4-201ENST00000340958 TRBV6-5A0A0K0K1A5 114 aa12.36□□□□□ -0.43
CLDN4-201ENST00000340958 KRTDAPP60985 99 aa12.36□□□□□ -0.43
CLDN4-201ENST00000340958 Q8NAQ8 132 aa12.36□□□□□ -0.43
CLDN4-201ENST00000340958 TMEM70Q9BUB7 260 aa12.36□□□□□ -0.43
CLDN4-201ENST00000340958 IGLV2-18A0A075B6J9 118 aa12.35□□□□□ -0.43
CLDN4-201ENST00000340958 NUDT3O95989 172 aa12.35□□□□□ -0.43
CLDN4-201ENST00000340958 HBDP02042 147 aa12.35□□□□□ -0.43
CLDN4-201ENST00000340958 BTF3P20290 206 aaKnown RBP12.35□□□□□ -0.43
CLDN4-201ENST00000340958 EDA2RQ9HAV5 297 aa12.35□□□□□ -0.43
CLDN4-201ENST00000340958 SPART-AS1P0CW21 52 aa12.34□□□□□ -0.43
CLDN4-201ENST00000340958 FCER1GP30273 86 aa12.34□□□□□ -0.43
CLDN4-201ENST00000340958 ORMDL2Q53FV1 153 aa12.34□□□□□ -0.43
CLDN4-201ENST00000340958 DKK2Q9UBU2 259 aa12.34□□□□□ -0.43
CLDN4-201ENST00000340958 HSPB8Q9UJY1 196 aa12.34□□□□□ -0.43
CLDN4-201ENST00000340958 DAD1P61803 113 aa12.34□□□□□ -0.43
CLDN4-201ENST00000340958 DEFB104AQ8WTQ1 72 aa12.34□□□□□ -0.43
CLDN4-201ENST00000340958 DNAJC30Q96LL9 226 aa12.34□□□□□ -0.43
CLDN4-201ENST00000340958 LINC01546A6NGU7 62 aa12.33□□□□□ -0.44
CLDN4-201ENST00000340958 K7EMI3 77 aa12.33□□□□□ -0.44
CLDN4-201ENST00000340958 K7EQD1 137 aa12.33□□□□□ -0.44
CLDN4-201ENST00000340958 C3orf79P0CE67 100 aa12.33□□□□□ -0.44
CLDN4-201ENST00000340958 POLR2KP53803 58 aaKnown RBP12.33□□□□□ -0.44
CLDN4-201ENST00000340958 RPL32P62910 135 aaKnown RBP12.33□□□□□ -0.44
CLDN4-201ENST00000340958 I3L3M4 83 aa12.32□□□□□ -0.44
CLDN4-201ENST00000340958 TRBV27A0A0K0K1C4 114 aa12.32□□□□□ -0.44
CLDN4-201ENST00000340958 SBSPONQ8IVN8 264 aa12.32□□□□□ -0.44
CLDN4-201ENST00000340958 LINC00612Q8N6U2 182 aa12.32□□□□□ -0.44
CLDN4-201ENST00000340958 SLC25A29Q8N8R3 303 aa12.32□□□□□ -0.44
CLDN4-201ENST00000340958 NEXN-AS1Q8NBZ9 246 aa12.32□□□□□ -0.44
CLDN4-201ENST00000340958 RPL36AP83881 106 aaKnown RBP12.31□□□□□ -0.44
CLDN4-201ENST00000340958 ZNRF2Q8NHG8 242 aa12.31□□□□□ -0.44
CLDN4-201ENST00000340958 RPL36ALQ969Q0 106 aaKnown RBP12.31□□□□□ -0.44
CLDN4-201ENST00000340958 PRADC1Q9BSG0 188 aa12.31□□□□□ -0.44
CLDN4-201ENST00000340958 NACAE9PAV3 2078 aa12.31□□□□□ -0.44
CLDN4-201ENST00000340958 TRBV10-1A0A0K0K1A3 114 aa12.3□□□□□ -0.44
CLDN4-201ENST00000340958 H0Y8G0 127 aa12.3□□□□□ -0.44
CLDN4-201ENST00000340958 SPATA45Q537H7 98 aa12.3□□□□□ -0.44
CLDN4-201ENST00000340958 C18orf15Q96N68 181 aa12.3□□□□□ -0.44
CLDN4-201ENST00000340958 MAP1LC3CQ9BXW4 147 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms