RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 Q9HAA7 133 aa7.22□□□□□ -1.25
PTCHD4-201ENST00000339488 ZFHX3Q15911 3703 aa7.22□□□□□ -1.25
PTCHD4-201ENST00000339488 PATE3B3GLJ2 98 aa7.22□□□□□ -1.25
PTCHD4-201ENST00000339488 HOXD3P31249 432 aaPredicted RBP7.22□□□□□ -1.25
PTCHD4-201ENST00000339488 RNASE6Q93091 150 aaKnown RBP7.22□□□□□ -1.25
PTCHD4-201ENST00000339488 C9orf47Q6ZRZ4 202 aa7.22□□□□□ -1.25
PTCHD4-201ENST00000339488 SLC50A1Q9BRV3 221 aa7.22□□□□□ -1.25
PTCHD4-201ENST00000339488 TRAV23DV6A0A075B6W5 121 aa7.21□□□□□ -1.26
PTCHD4-201ENST00000339488 I3L2K1 104 aa7.21□□□□□ -1.26
PTCHD4-201ENST00000339488 RETNQ9HD89 108 aa7.21□□□□□ -1.26
PTCHD4-201ENST00000339488 SPTBN2O15020 2390 aa7.21□□□□□ -1.26
PTCHD4-201ENST00000339488 A0A0J9YXV3 536 aa7.21□□□□□ -1.26
PTCHD4-201ENST00000339488 IGIPA6NJ69 53 aa7.21□□□□□ -1.26
PTCHD4-201ENST00000339488 Q0VFX4 171 aa7.21□□□□□ -1.26
PTCHD4-201ENST00000339488 VMA21Q3ZAQ7 101 aa7.21□□□□□ -1.26
PTCHD4-201ENST00000339488 LITAFQ99732 161 aa7.21□□□□□ -1.26
PTCHD4-201ENST00000339488 C22orf24Q9Y442 160 aa7.21□□□□□ -1.26
PTCHD4-201ENST00000339488 PTPRZ1P23471 2315 aaPredicted RBP7.2□□□□□ -1.26
PTCHD4-201ENST00000339488 IGF1P05019 195 aa7.2□□□□□ -1.26
PTCHD4-201ENST00000339488 NUP37Q8NFH4 326 aa7.2□□□□□ -1.26
PTCHD4-201ENST00000339488 SPANXCQ9NY87 97 aa7.2□□□□□ -1.26
PTCHD4-201ENST00000339488 CNOT1A5YKK6 2376 aaKnown RBP7.2□□□□□ -1.26
PTCHD4-201ENST00000339488 BAALC-AS2P0C853 105 aa7.2□□□□□ -1.26
PTCHD4-201ENST00000339488 RNASE13Q5GAN3 156 aaKnown RBP7.2□□□□□ -1.26
PTCHD4-201ENST00000339488 TMEM200BQ69YZ2 307 aa7.2□□□□□ -1.26
PTCHD4-201ENST00000339488 C14orf132Q9NPU4 83 aa7.2□□□□□ -1.26
PTCHD4-201ENST00000339488 SMAD5-AS1Q9Y6J3 95 aa7.2□□□□□ -1.26
PTCHD4-201ENST00000339488 IGHV3-49A0A0A0MS15 119 aa7.19□□□□□ -1.26
PTCHD4-201ENST00000339488 LEPROTO15243 131 aa7.19□□□□□ -1.26
PTCHD4-201ENST00000339488 GHRHP01286 108 aa7.19□□□□□ -1.26
PTCHD4-201ENST00000339488 IGHV1-2P23083 117 aa7.19□□□□□ -1.26
PTCHD4-201ENST00000339488 SLC25A45Q8N413 288 aa7.19□□□□□ -1.26
PTCHD4-201ENST00000339488 PKDREJQ9NTG1 2253 aa7.19□□□□□ -1.26
PTCHD4-201ENST00000339488 PCNX1Q96RV3 2341 aa7.19□□□□□ -1.26
PTCHD4-201ENST00000339488 TEX22C9J3V5 150 aa7.19□□□□□ -1.26
PTCHD4-201ENST00000339488 K7EIM0 57 aa7.19□□□□□ -1.26
PTCHD4-201ENST00000339488 PRR9Q5T870 116 aa7.19□□□□□ -1.26
PTCHD4-201ENST00000339488 Q8N2B8 174 aa7.19□□□□□ -1.26
PTCHD4-201ENST00000339488 LINC00846Q9NV44 126 aa7.19□□□□□ -1.26
PTCHD4-201ENST00000339488 TMEM61Q8N0U2 210 aa7.18□□□□□ -1.26
PTCHD4-201ENST00000339488 FAM218AQ96MZ4 157 aa7.18□□□□□ -1.26
PTCHD4-201ENST00000339488 ATMQ13315 3056 aa7.18□□□□□ -1.26
PTCHD4-201ENST00000339488 TRAV12-2A0A075B6T6 113 aa7.18□□□□□ -1.26
PTCHD4-201ENST00000339488 DEFB1P60022 68 aa7.18□□□□□ -1.26
PTCHD4-201ENST00000339488 ZNF876PQ49A33 203 aa7.18□□□□□ -1.26
PTCHD4-201ENST00000339488 MPLKIPQ8TAP9 179 aa7.18□□□□□ -1.26
PTCHD4-201ENST00000339488 GAFA1Q96PS6 74 aa7.18□□□□□ -1.26
PTCHD4-201ENST00000339488 BUB1B-PAK6H3BSN5 160 aa7.18□□□□□ -1.26
PTCHD4-201ENST00000339488 IGHV3-30-3P0DP02 117 aa7.17□□□□□ -1.26
PTCHD4-201ENST00000339488 PAPPA-AS1Q5QFB9 102 aa7.17□□□□□ -1.26
PTCHD4-201ENST00000339488 LYPD5Q6UWN5 251 aa7.17□□□□□ -1.26
PTCHD4-201ENST00000339488 COX8CQ7Z4L0 72 aa7.17□□□□□ -1.26
PTCHD4-201ENST00000339488 PRIMA1Q86XR5 153 aa7.17□□□□□ -1.26
PTCHD4-201ENST00000339488 SNURFQ9Y675 71 aa7.17□□□□□ -1.26
PTCHD4-201ENST00000339488 ABCA4P78363 2273 aa7.17□□□□□ -1.26
PTCHD4-201ENST00000339488 DNAL4O96015 105 aa7.17□□□□□ -1.26
PTCHD4-201ENST00000339488 PDE6HQ13956 83 aa7.17□□□□□ -1.26
PTCHD4-201ENST00000339488 PRSS33Q8NF86 280 aa7.17□□□□□ -1.26
PTCHD4-201ENST00000339488 ZNF625Q96I27 306 aaPredicted RBP7.17□□□□□ -1.26
PTCHD4-201ENST00000339488 IGHV5-10-1A0A0J9YXX1 117 aa7.16□□□□□ -1.26
PTCHD4-201ENST00000339488 FOLR3P41439 243 aa7.16□□□□□ -1.26
PTCHD4-201ENST00000339488 RPL28P46779 137 aaKnown RBP7.16□□□□□ -1.26
PTCHD4-201ENST00000339488 RBM3P98179 157 aaKnown RBP7.16□□□□□ -1.26
PTCHD4-201ENST00000339488 S100A7L2Q5SY68 101 aa7.16□□□□□ -1.26
PTCHD4-201ENST00000339488 BPESC1Q9GZL8 116 aa7.16□□□□□ -1.26
PTCHD4-201ENST00000339488 S100A4P26447 101 aaKnown RBP7.16□□□□□ -1.26
PTCHD4-201ENST00000339488 SOSTDC1Q6X4U4 206 aa7.16□□□□□ -1.26
PTCHD4-201ENST00000339488 DEFB127Q9H1M4 99 aa7.16□□□□□ -1.26
PTCHD4-201ENST00000339488 ARRDC1-AS1Q9H2J1 176 aa7.16□□□□□ -1.26
PTCHD4-201ENST00000339488 DYNLRB1Q9NP97 96 aa7.16□□□□□ -1.26
PTCHD4-201ENST00000339488 SERP1Q9Y6X1 66 aa7.16□□□□□ -1.26
PTCHD4-201ENST00000339488 A0A087WWL8 130 aa7.15□□□□□ -1.26
PTCHD4-201ENST00000339488 NBR2O15453 112 aa7.15□□□□□ -1.26
PTCHD4-201ENST00000339488 TRBV12-3P01733 135 aa7.15□□□□□ -1.26
PTCHD4-201ENST00000339488 CCL4P13236 92 aa7.15□□□□□ -1.26
PTCHD4-201ENST00000339488 GPHB5Q86YW7 130 aa7.15□□□□□ -1.26
PTCHD4-201ENST00000339488 RBMY1BA6NDE4 496 aaKnown RBP7.15□□□□□ -1.27
PTCHD4-201ENST00000339488 RBMY1EA6NEQ0 496 aaKnown RBP7.15□□□□□ -1.27
PTCHD4-201ENST00000339488 RBMY1DP0C7P1 496 aaKnown RBP7.15□□□□□ -1.27
PTCHD4-201ENST00000339488 RBMY1A1P0DJD3 496 aaKnown RBP7.15□□□□□ -1.27
PTCHD4-201ENST00000339488 RBMY1CP0DJD4 496 aa7.15□□□□□ -1.27
PTCHD4-201ENST00000339488 XCL1P47992 114 aa7.15□□□□□ -1.27
PTCHD4-201ENST00000339488 RBMY1FQ15415 496 aaKnown RBP7.15□□□□□ -1.27
PTCHD4-201ENST00000339488 FAM19A1Q7Z5A9 133 aa7.15□□□□□ -1.27
PTCHD4-201ENST00000339488 CNEP1R1Q8N9A8 125 aa7.15□□□□□ -1.27
PTCHD4-201ENST00000339488 XCL2Q9UBD3 114 aa7.15□□□□□ -1.27
PTCHD4-201ENST00000339488 SPANXDQ9BXN6 97 aa7.14□□□□□ -1.27
PTCHD4-201ENST00000339488 NDUFA12Q9UI09 145 aa7.14□□□□□ -1.27
PTCHD4-201ENST00000339488 PRB1P04280 392 aa7.14□□□□□ -1.27
PTCHD4-201ENST00000339488 MIAQ16674 131 aa7.14□□□□□ -1.27
PTCHD4-201ENST00000339488 PVRIGQ6DKI7 326 aa7.14□□□□□ -1.27
PTCHD4-201ENST00000339488 PHLDA3Q9Y5J5 127 aa7.14□□□□□ -1.27
PTCHD4-201ENST00000339488 SPTBN4Q9H254 2564 aa7.14□□□□□ -1.27
PTCHD4-201ENST00000339488 F5H697 171 aa7.14□□□□□ -1.27
PTCHD4-201ENST00000339488 TTTY12Q9BZ98 90 aa7.14□□□□□ -1.27
PTCHD4-201ENST00000339488 ADGRG4Q8IZF6 3080 aa7.13□□□□□ -1.27
PTCHD4-201ENST00000339488 H7BZZ5 65 aa7.13□□□□□ -1.27
PTCHD4-201ENST00000339488 RMI2Q96E14 147 aa7.13□□□□□ -1.27
PTCHD4-201ENST00000339488 Q96MF0 132 aa7.13□□□□□ -1.27
PTCHD4-201ENST00000339488 BUB3O43684 328 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms