RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 TMEM208Q9BTX3 173 aa5.37□□□□□ -1.55
SRFBP1-201ENST00000339397 ZMAT4Q9H898 229 aa5.37□□□□□ -1.55
SRFBP1-201ENST00000339397 GOLT1BQ9Y3E0 138 aa5.37□□□□□ -1.55
SRFBP1-201ENST00000339397 SDHAF1A6NFY7 115 aa5.36□□□□□ -1.55
SRFBP1-201ENST00000339397 POLR2KP53803 58 aaKnown RBP5.36□□□□□ -1.55
SRFBP1-201ENST00000339397 BATFQ16520 125 aa5.36□□□□□ -1.55
SRFBP1-201ENST00000339397 TRGV11A0A075B6L2 103 aa5.36□□□□□ -1.55
SRFBP1-201ENST00000339397 BEAN1Q3B7T3 259 aa5.36□□□□□ -1.55
SRFBP1-201ENST00000339397 NDUFA11Q86Y39 141 aa5.36□□□□□ -1.55
SRFBP1-201ENST00000339397 C20orf78Q9BR46 151 aa5.36□□□□□ -1.55
SRFBP1-201ENST00000339397 TTTY13Q9BZ97 58 aa5.36□□□□□ -1.55
SRFBP1-201ENST00000339397 C20orf202A1L168 122 aa5.35□□□□□ -1.55
SRFBP1-201ENST00000339397 MRPL52Q86TS9 123 aaKnown RBP5.35□□□□□ -1.55
SRFBP1-201ENST00000339397 SYT8Q8NBV8 401 aa5.35□□□□□ -1.55
SRFBP1-201ENST00000339397 ST20Q9HBF5 79 aa5.35□□□□□ -1.55
SRFBP1-201ENST00000339397 INSP01308 110 aa5.35□□□□□ -1.55
SRFBP1-201ENST00000339397 NOTCH1P46531 2555 aa5.34□□□□□ -1.55
SRFBP1-201ENST00000339397 M0R2P5 195 aa5.34□□□□□ -1.55
SRFBP1-201ENST00000339397 LGALS9BQ3B8N2 356 aa5.34□□□□□ -1.55
SRFBP1-201ENST00000339397 CFAP126Q5VTH2 177 aa5.34□□□□□ -1.55
SRFBP1-201ENST00000339397 LGALS9CQ6DKI2 356 aa5.34□□□□□ -1.55
SRFBP1-201ENST00000339397 C2orf66Q6UXQ4 117 aa5.34□□□□□ -1.55
SRFBP1-201ENST00000339397 OPRPNQ99935 248 aaPredicted RBP5.34□□□□□ -1.55
SRFBP1-201ENST00000339397 MRPL35Q9NZE8 188 aaKnown RBP5.34□□□□□ -1.55
SRFBP1-201ENST00000339397 UQCR10Q9UDW1 63 aa5.34□□□□□ -1.55
SRFBP1-201ENST00000339397 HHLA3Q9XRX5 114 aa5.34□□□□□ -1.55
SRFBP1-201ENST00000339397 IGKV2D-26A0A0A0MRZ7 120 aa5.34□□□□□ -1.55
SRFBP1-201ENST00000339397 TSHBP01222 138 aa5.34□□□□□ -1.55
SRFBP1-201ENST00000339397 UFSP1Q6NVU6 142 aa5.34□□□□□ -1.55
SRFBP1-201ENST00000339397 CMYA5Q8N3K9 4069 aa5.34□□□□□ -1.55
SRFBP1-201ENST00000339397 IGHV3-53P01767 116 aa5.34□□□□□ -1.56
SRFBP1-201ENST00000339397 EMP1P54849 157 aa5.34□□□□□ -1.56
SRFBP1-201ENST00000339397 ZFP2Q6ZN57 461 aa5.34□□□□□ -1.56
SRFBP1-201ENST00000339397 Q6ZTI0 123 aa5.34□□□□□ -1.56
SRFBP1-201ENST00000339397 PCP2Q8IVA1 136 aa5.34□□□□□ -1.56
SRFBP1-201ENST00000339397 TOMM6Q96B49 74 aa5.34□□□□□ -1.56
SRFBP1-201ENST00000339397 SCGB3A1Q96QR1 104 aa5.34□□□□□ -1.56
SRFBP1-201ENST00000339397 HINT1P49773 126 aaPredicted RBP5.33□□□□□ -1.56
SRFBP1-201ENST00000339397 HNRNPA3P51991 378 aaKnown RBP5.33□□□□□ -1.56
SRFBP1-201ENST00000339397 RNASE8Q8TDE3 154 aaKnown RBP5.33□□□□□ -1.56
SRFBP1-201ENST00000339397 TRGV1A0A0A0MS02 117 aa5.33□□□□□ -1.56
SRFBP1-201ENST00000339397 IGHV3-38A0A0C4DH36 116 aa5.33□□□□□ -1.56
SRFBP1-201ENST00000339397 HSBP1L1C9JCN9 74 aa5.33□□□□□ -1.56
SRFBP1-201ENST00000339397 G0S2P27469 103 aa5.33□□□□□ -1.56
SRFBP1-201ENST00000339397 ZNF415Q09FC8 603 aa5.33□□□□□ -1.56
SRFBP1-201ENST00000339397 ORMDL2Q53FV1 153 aa5.33□□□□□ -1.56
SRFBP1-201ENST00000339397 Q6ZVH6 145 aa5.33□□□□□ -1.56
SRFBP1-201ENST00000339397 GTSCR1Q86UQ5 136 aa5.33□□□□□ -1.56
SRFBP1-201ENST00000339397 CSNK1G2-AS1Q8NCQ2 148 aa5.33□□□□□ -1.56
SRFBP1-201ENST00000339397 ZNF479Q96JC4 524 aa5.33□□□□□ -1.56
SRFBP1-201ENST00000339397 C1orf43Q9BWL3 253 aa5.33□□□□□ -1.56
SRFBP1-201ENST00000339397 NOP10Q9NPE3 64 aaKnown RBP5.33□□□□□ -1.56
SRFBP1-201ENST00000339397 TP53TG1Q9Y2A0 90 aa5.33□□□□□ -1.56
SRFBP1-201ENST00000339397 TRBV27A0A0K0K1C4 114 aa5.32□□□□□ -1.56
SRFBP1-201ENST00000339397 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.32□□□□□ -1.56
SRFBP1-201ENST00000339397 VCYO14598 125 aa5.32□□□□□ -1.56
SRFBP1-201ENST00000339397 ZNF25P17030 456 aaPredicted RBP5.32□□□□□ -1.56
SRFBP1-201ENST00000339397 CITED1Q99966 193 aa5.32□□□□□ -1.56
SRFBP1-201ENST00000339397 PLAC8L1A1L4L8 177 aa5.32□□□□□ -1.56
SRFBP1-201ENST00000339397 A4D1N5 150 aa5.32□□□□□ -1.56
SRFBP1-201ENST00000339397 NMUP48645 174 aa5.32□□□□□ -1.56
SRFBP1-201ENST00000339397 CEMP1Q6PRD7 247 aaPredicted RBP5.32□□□□□ -1.56
SRFBP1-201ENST00000339397 BAALCQ8WXS3 180 aa5.32□□□□□ -1.56
SRFBP1-201ENST00000339397 TRBV6-5A0A0K0K1A5 114 aa5.31□□□□□ -1.56
SRFBP1-201ENST00000339397 ATP5LO75964 103 aa5.31□□□□□ -1.56
SRFBP1-201ENST00000339397 FGF6P10767 208 aa5.31□□□□□ -1.56
SRFBP1-201ENST00000339397 PHLDA1Q8WV24 401 aaPredicted RBP5.31□□□□□ -1.56
SRFBP1-201ENST00000339397 KIR2DL4Q99706 377 aa5.31□□□□□ -1.56
SRFBP1-201ENST00000339397 PRSS29PA6NIE9 313 aa5.31□□□□□ -1.56
SRFBP1-201ENST00000339397 IGIPA6NJ69 53 aa5.31□□□□□ -1.56
SRFBP1-201ENST00000339397 PPP1R17O96001 155 aa5.31□□□□□ -1.56
SRFBP1-201ENST00000339397 IGKCP01834 107 aa5.31□□□□□ -1.56
SRFBP1-201ENST00000339397 RIPPLY3P57055 190 aa5.31□□□□□ -1.56
SRFBP1-201ENST00000339397 MPV17L2Q567V2 206 aa5.31□□□□□ -1.56
SRFBP1-201ENST00000339397 SLC25A34Q6PIV7 304 aa5.31□□□□□ -1.56
SRFBP1-201ENST00000339397 NEXN-AS1Q8NBZ9 246 aa5.31□□□□□ -1.56
SRFBP1-201ENST00000339397 A0A087WX48 190 aa5.3□□□□□ -1.56
SRFBP1-201ENST00000339397 A8MWV9 139 aa5.3□□□□□ -1.56
SRFBP1-201ENST00000339397 COX8AP10176 69 aa5.3□□□□□ -1.56
SRFBP1-201ENST00000339397 C2orf91Q6ZV80 131 aa5.3□□□□□ -1.56
SRFBP1-201ENST00000339397 NBEAL1Q6ZS30 2694 aa5.3□□□□□ -1.56
SRFBP1-201ENST00000339397 GAGE1Q13065 139 aa5.3□□□□□ -1.56
SRFBP1-201ENST00000339397 RNASE13Q5GAN3 156 aaKnown RBP5.3□□□□□ -1.56
SRFBP1-201ENST00000339397 ERASQ7Z444 233 aa5.3□□□□□ -1.56
SRFBP1-201ENST00000339397 LINC00467Q9BRT7 94 aa5.3□□□□□ -1.56
SRFBP1-201ENST00000339397 CYSLTR1Q9Y271 337 aa5.3□□□□□ -1.56
SRFBP1-201ENST00000339397 GAGE12BA1L429 117 aa5.3□□□□□ -1.56
SRFBP1-201ENST00000339397 DLEU1O43261 78 aa5.3□□□□□ -1.56
SRFBP1-201ENST00000339397 GAGE7O76087 117 aa5.3□□□□□ -1.56
SRFBP1-201ENST00000339397 GAGE12FP0CL80 117 aa5.3□□□□□ -1.56
SRFBP1-201ENST00000339397 GAGE12GP0CL81 117 aa5.3□□□□□ -1.56
SRFBP1-201ENST00000339397 GAGE12IP0CL82 117 aa5.3□□□□□ -1.56
SRFBP1-201ENST00000339397 IL17DQ8TAD2 202 aa5.3□□□□□ -1.56
SRFBP1-201ENST00000339397 TMEM263Q8WUH6 116 aaKnown RBP5.3□□□□□ -1.56
SRFBP1-201ENST00000339397 I3L3M4 83 aa5.29□□□□□ -1.56
SRFBP1-201ENST00000339397 DPM2O94777 84 aa5.29□□□□□ -1.56
SRFBP1-201ENST00000339397 RPL32P62910 135 aaKnown RBP5.29□□□□□ -1.56
SRFBP1-201ENST00000339397 KRTAP24-1Q3LI83 254 aa5.29□□□□□ -1.56
SRFBP1-201ENST00000339397 MAPKAPK5-AS1Q8N8E1 139 aa5.29□□□□□ -1.56
SRFBP1-201ENST00000339397 OR4C5Q8NGB2 326 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms