RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 MDFICQ9P1T7 246 aa10.51□□□□□ -0.73
RTN4-202ENST00000337526 DAZ2Q13117 558 aaKnown RBP10.5□□□□□ -0.73
RTN4-202ENST00000337526 DAZ4Q86SG3 579 aaKnown RBP10.5□□□□□ -0.73
RTN4-202ENST00000337526 DAZ3Q9NR90 486 aaKnown RBP10.5□□□□□ -0.73
RTN4-202ENST00000337526 ACYP1P07311 99 aa10.5□□□□□ -0.73
RTN4-202ENST00000337526 ORMDL1Q9P0S3 153 aa10.5□□□□□ -0.73
RTN4-202ENST00000337526 TP53TG3Q9ULZ0 132 aa10.5□□□□□ -0.73
RTN4-202ENST00000337526 FOXI1Q12951 378 aa10.5□□□□□ -0.73
RTN4-202ENST00000337526 K7EQD1 137 aa10.5□□□□□ -0.73
RTN4-202ENST00000337526 C20orf203Q8NBC4 194 aa10.5□□□□□ -0.73
RTN4-202ENST00000337526 NRGNQ92686 78 aa10.5□□□□□ -0.73
RTN4-202ENST00000337526 KIAA1549Q9HCM3 1950 aa10.5□□□□□ -0.73
RTN4-202ENST00000337526 IGLC6P0CF74 106 aa10.49□□□□□ -0.73
RTN4-202ENST00000337526 TRBV7-3A0A075B6L6 115 aa10.49□□□□□ -0.73
RTN4-202ENST00000337526 CCDC140Q96MF4 163 aa10.49□□□□□ -0.73
RTN4-202ENST00000337526 LINC01548A6NM66 108 aa10.49□□□□□ -0.73
RTN4-202ENST00000337526 DAZAP2Q15038 168 aaPredicted RBP10.49□□□□□ -0.73
RTN4-202ENST00000337526 ATP6V0E2Q8NHE4 81 aa10.49□□□□□ -0.73
RTN4-202ENST00000337526 HCFC1P51610 2035 aa10.49□□□□□ -0.73
RTN4-202ENST00000337526 SETD2Q9BYW2 2564 aaPredicted RBP10.49□□□□□ -0.73
RTN4-202ENST00000337526 H0YGX0 51 aa10.49□□□□□ -0.73
RTN4-202ENST00000337526 TRACP01848 142 aa10.49□□□□□ -0.73
RTN4-202ENST00000337526 RBMY1FQ15415 496 aaKnown RBP10.49□□□□□ -0.73
RTN4-202ENST00000337526 GYPEP15421 78 aa10.48□□□□□ -0.73
RTN4-202ENST00000337526 HIST2H2BCQ6DN03 193 aa10.48□□□□□ -0.73
RTN4-202ENST00000337526 A0A0J9YX75 114 aa10.48□□□□□ -0.73
RTN4-202ENST00000337526 OPRPNQ99935 248 aaPredicted RBP10.48□□□□□ -0.73
RTN4-202ENST00000337526 COL4A4P53420 1690 aaPredicted RBP10.48□□□□□ -0.73
RTN4-202ENST00000337526 DEFB113Q30KQ7 82 aa10.48□□□□□ -0.73
RTN4-202ENST00000337526 USP9XQ93008 2570 aaPredicted RBP10.48□□□□□ -0.73
RTN4-202ENST00000337526 C16orf74Q96GX8 76 aa10.48□□□□□ -0.73
RTN4-202ENST00000337526 IGLV10-54A0A075B6I4 117 aa10.47□□□□□ -0.73
RTN4-202ENST00000337526 VSIG2Q96IQ7 327 aa10.47□□□□□ -0.73
RTN4-202ENST00000337526 TP73-AS1Q9UF72 201 aa10.47□□□□□ -0.73
RTN4-202ENST00000337526 TMEM61Q8N0U2 210 aa10.47□□□□□ -0.73
RTN4-202ENST00000337526 PTH2Q96A98 100 aa10.47□□□□□ -0.73
RTN4-202ENST00000337526 ODF3BA8MYP8 253 aa10.46□□□□□ -0.73
RTN4-202ENST00000337526 G3V4G9 280 aa10.46□□□□□ -0.73
RTN4-202ENST00000337526 LMO4P61968 165 aa10.46□□□□□ -0.73
RTN4-202ENST00000337526 J3QKU1 62 aa10.46□□□□□ -0.74
RTN4-202ENST00000337526 UTRNP46939 3433 aa10.46□□□□□ -0.74
RTN4-202ENST00000337526 DSCAMO60469 2012 aa10.46□□□□□ -0.74
RTN4-202ENST00000337526 IGHV3-30-3P0DP02 117 aa10.45□□□□□ -0.74
RTN4-202ENST00000337526 COX7B2Q8TF08 81 aa10.45□□□□□ -0.74
RTN4-202ENST00000337526 IGHV1-58A0A0C4DH39 117 aa10.45□□□□□ -0.74
RTN4-202ENST00000337526 TMEM89A2RUT3 159 aa10.45□□□□□ -0.74
RTN4-202ENST00000337526 CRIP1P50238 77 aa10.44□□□□□ -0.74
RTN4-202ENST00000337526 PIFOQ8TCI5 191 aa10.44□□□□□ -0.74
RTN4-202ENST00000337526 CRYGBP07316 175 aa10.44□□□□□ -0.74
RTN4-202ENST00000337526 NDUFA11Q86Y39 141 aa10.44□□□□□ -0.74
RTN4-202ENST00000337526 IGKV2D-24A0A075B6R9 120 aa10.44□□□□□ -0.74
RTN4-202ENST00000337526 A6NDX4 124 aa10.44□□□□□ -0.74
RTN4-202ENST00000337526 CEP295Q9C0D2 2601 aa10.44□□□□□ -0.74
RTN4-202ENST00000337526 TRBV10-2A0A0K0K1G8 114 aa10.44□□□□□ -0.74
RTN4-202ENST00000337526 COX7A2LO14548 114 aa10.44□□□□□ -0.74
RTN4-202ENST00000337526 CEMP1Q6PRD7 247 aaPredicted RBP10.43□□□□□ -0.74
RTN4-202ENST00000337526 LGALS9O00182 355 aa10.43□□□□□ -0.74
RTN4-202ENST00000337526 MYCNOSP40205 109 aa10.43□□□□□ -0.74
RTN4-202ENST00000337526 ESM1Q9NQ30 184 aa10.43□□□□□ -0.74
RTN4-202ENST00000337526 H3BT86 120 aa10.43□□□□□ -0.74
RTN4-202ENST00000337526 USP9YO00507 2555 aaPredicted RBP10.43□□□□□ -0.74
RTN4-202ENST00000337526 MRPL23Q16540 153 aaKnown RBP10.42□□□□□ -0.74
RTN4-202ENST00000337526 CLEC2BQ92478 149 aa10.42□□□□□ -0.74
RTN4-202ENST00000337526 SS18L2Q9UHA2 77 aa10.42□□□□□ -0.74
RTN4-202ENST00000337526 ATP5G1P05496 136 aa10.42□□□□□ -0.74
RTN4-202ENST00000337526 RMI2Q96E14 147 aa10.42□□□□□ -0.74
RTN4-202ENST00000337526 C1orf43Q9BWL3 253 aa10.41□□□□□ -0.74
RTN4-202ENST00000337526 IGF1P05019 195 aa10.41□□□□□ -0.74
RTN4-202ENST00000337526 A0A0B4J2C4 111 aa10.41□□□□□ -0.74
RTN4-202ENST00000337526 PRB1P04280 392 aa10.41□□□□□ -0.74
RTN4-202ENST00000337526 JMJD1CQ15652 2540 aa10.41□□□□□ -0.74
RTN4-202ENST00000337526 Q9HAA7 133 aa10.41□□□□□ -0.74
RTN4-202ENST00000337526 HHLA3Q9XRX5 114 aa10.41□□□□□ -0.74
RTN4-202ENST00000337526 ARHGAP32A7KAX9 2087 aa10.41□□□□□ -0.74
RTN4-202ENST00000337526 IGKV3D-7A0A0C4DH55 119 aa10.4□□□□□ -0.74
RTN4-202ENST00000337526 MIR7-3HGQ8N6C7 128 aa10.4□□□□□ -0.74
RTN4-202ENST00000337526 CAMK2N2Q96S95 79 aa10.4□□□□□ -0.74
RTN4-202ENST00000337526 TM2D2Q9BX73 214 aa10.4□□□□□ -0.74
RTN4-202ENST00000337526 IGHV4-4A0A075B6R2 117 aa10.4□□□□□ -0.74
RTN4-202ENST00000337526 FAM236AA0A1B0GUQ0 79 aa10.4□□□□□ -0.74
RTN4-202ENST00000337526 FAM236BA0A1B0GV22 79 aa10.4□□□□□ -0.74
RTN4-202ENST00000337526 LECT2O14960 151 aa10.4□□□□□ -0.74
RTN4-202ENST00000337526 SPART-AS1P0CW21 52 aa10.4□□□□□ -0.74
RTN4-202ENST00000337526 IGKV2D-26A0A0A0MRZ7 120 aa10.4□□□□□ -0.74
RTN4-202ENST00000337526 hADV29S1A0JD25 119 aa10.39□□□□□ -0.75
RTN4-202ENST00000337526 CITED1Q99966 193 aa10.39□□□□□ -0.75
RTN4-202ENST00000337526 FSTL3O95633 263 aa10.39□□□□□ -0.75
RTN4-202ENST00000337526 DEFB105AQ8NG35 78 aa10.39□□□□□ -0.75
RTN4-202ENST00000337526 TNFRSF13BO14836 293 aaPredicted RBP10.39□□□□□ -0.75
RTN4-202ENST00000337526 TRBV10-1A0A0K0K1A3 114 aa10.39□□□□□ -0.75
RTN4-202ENST00000337526 LY6LH3BQJ8 138 aa10.39□□□□□ -0.75
RTN4-202ENST00000337526 TCL1BO95988 128 aa10.39□□□□□ -0.75
RTN4-202ENST00000337526 EBI3Q14213 229 aa10.39□□□□□ -0.75
RTN4-202ENST00000337526 Q6ZUT4 128 aa10.39□□□□□ -0.75
RTN4-202ENST00000337526 NEXN-AS1Q8NBZ9 246 aa10.39□□□□□ -0.75
RTN4-202ENST00000337526 ZFYVE26Q68DK2 2539 aa10.39□□□□□ -0.75
RTN4-202ENST00000337526 ABCA12Q86UK0 2595 aa10.39□□□□□ -0.75
RTN4-202ENST00000337526 P0DMU3 169 aa10.38□□□□□ -0.75
RTN4-202ENST00000337526 FAM231AP0DMU4 169 aa10.38□□□□□ -0.75
RTN4-202ENST00000337526 FAM231CP0DMU5 169 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 171.9 ms