RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 DUSP14O95147 198 aaKnown RBP16.99■□□□□ 0.31
CLPTM1-201ENST00000337392 IGKCP01834 107 aa16.99■□□□□ 0.31
CLPTM1-201ENST00000337392 C2orf66Q6UXQ4 117 aa16.99■□□□□ 0.31
CLPTM1-201ENST00000337392 C12orf54Q6X4T0 127 aa16.99■□□□□ 0.31
CLPTM1-201ENST00000337392 MORN3Q6PF18 240 aaPredicted RBP16.98■□□□□ 0.31
CLPTM1-201ENST00000337392 SCGB3A1Q96QR1 104 aa16.98■□□□□ 0.31
CLPTM1-201ENST00000337392 K7EMI3 77 aa16.98■□□□□ 0.31
CLPTM1-201ENST00000337392 GTSF1LQ9H1H1 148 aa16.98■□□□□ 0.31
CLPTM1-201ENST00000337392 CRYGDP07320 174 aa16.97■□□□□ 0.31
CLPTM1-201ENST00000337392 PEMTQ9UBM1 199 aa16.97■□□□□ 0.31
CLPTM1-201ENST00000337392 SMAGPQ0VAQ4 97 aa16.97■□□□□ 0.31
CLPTM1-201ENST00000337392 HLA-DRB4P13762 266 aa16.96■□□□□ 0.31
CLPTM1-201ENST00000337392 LINC01006Q8NI28 216 aa16.96■□□□□ 0.31
CLPTM1-201ENST00000337392 ZMAT4Q9H898 229 aa16.96■□□□□ 0.31
CLPTM1-201ENST00000337392 HLA-DRB4X5D2U9 266 aa16.96■□□□□ 0.31
CLPTM1-201ENST00000337392 SDHAF1A6NFY7 115 aa16.95■□□□□ 0.3
CLPTM1-201ENST00000337392 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.95■□□□□ 0.3
CLPTM1-201ENST00000337392 BOD1L2Q8IYS8 172 aa16.95■□□□□ 0.3
CLPTM1-201ENST00000337392 ODF3Q96PU9 254 aa16.95■□□□□ 0.3
CLPTM1-201ENST00000337392 JMJD8Q96S16 334 aa16.95■□□□□ 0.3
CLPTM1-201ENST00000337392 C20orf78Q9BR46 151 aa16.95■□□□□ 0.3
CLPTM1-201ENST00000337392 IGHV3OR16-12A0A075B7B8 117 aa16.95■□□□□ 0.3
CLPTM1-201ENST00000337392 SCGB1A1P11684 91 aa16.95■□□□□ 0.3
CLPTM1-201ENST00000337392 CCL24O00175 119 aa16.94■□□□□ 0.3
CLPTM1-201ENST00000337392 WFDC10AQ9H1F0 79 aa16.94■□□□□ 0.3
CLPTM1-201ENST00000337392 FLNBO75369 2602 aaKnown RBP16.94■□□□□ 0.3
CLPTM1-201ENST00000337392 ATP5LO75964 103 aa16.94■□□□□ 0.3
CLPTM1-201ENST00000337392 DPM2O94777 84 aa16.94■□□□□ 0.3
CLPTM1-201ENST00000337392 TOMM6Q96B49 74 aa16.94■□□□□ 0.3
CLPTM1-201ENST00000337392 NAA38Q9BRA0 125 aaKnown RBP16.94■□□□□ 0.3
CLPTM1-201ENST00000337392 XCL2Q9UBD3 114 aa16.94■□□□□ 0.3
CLPTM1-201ENST00000337392 TRAV26-1A0A087WT03 109 aa16.93■□□□□ 0.3
CLPTM1-201ENST00000337392 TP53TG1Q9Y2A0 90 aa16.93■□□□□ 0.3
CLPTM1-201ENST00000337392 ATRQ13535 2644 aa16.93■□□□□ 0.3
CLPTM1-201ENST00000337392 ODF3L2Q3SX64 289 aa16.93■□□□□ 0.3
CLPTM1-201ENST00000337392 OPRPNQ99935 248 aaPredicted RBP16.93■□□□□ 0.3
CLPTM1-201ENST00000337392 ORMDL2Q53FV1 153 aa16.92■□□□□ 0.3
CLPTM1-201ENST00000337392 A0A087WX48 190 aa16.91■□□□□ 0.3
CLPTM1-201ENST00000337392 TSHBP01222 138 aa16.91■□□□□ 0.3
CLPTM1-201ENST00000337392 CRYBA4P53673 196 aa16.91■□□□□ 0.3
CLPTM1-201ENST00000337392 GTF2H5Q6ZYL4 71 aa16.91■□□□□ 0.3
CLPTM1-201ENST00000337392 MAPKAPK5-AS1Q8N8E1 139 aa16.91■□□□□ 0.3
CLPTM1-201ENST00000337392 BAALCQ8WXS3 180 aa16.91■□□□□ 0.3
CLPTM1-201ENST00000337392 M0QY20 66 aa16.91■□□□□ 0.3
CLPTM1-201ENST00000337392 POLR2KP53803 58 aaKnown RBP16.91■□□□□ 0.3
CLPTM1-201ENST00000337392 TMEM86BQ8N661 226 aa16.91■□□□□ 0.3
CLPTM1-201ENST00000337392 ZFP2Q6ZN57 461 aa16.9■□□□□ 0.3
CLPTM1-201ENST00000337392 POM121L12Q8N7R1 296 aa16.9■□□□□ 0.3
CLPTM1-201ENST00000337392 NSUN5P1Q3KNT7 163 aa16.89■□□□□ 0.29
CLPTM1-201ENST00000337392 SIGMAR1Q99720 223 aa16.89■□□□□ 0.29
CLPTM1-201ENST00000337392 K7EP34 96 aa16.88■□□□□ 0.29
CLPTM1-201ENST00000337392 TMEM97Q5BJF2 176 aa16.88■□□□□ 0.29
CLPTM1-201ENST00000337392 NEXN-AS1Q8NBZ9 246 aa16.88■□□□□ 0.29
CLPTM1-201ENST00000337392 PRSS29PA6NIE9 313 aa16.88■□□□□ 0.29
CLPTM1-201ENST00000337392 Q6ZSN1 163 aa16.88■□□□□ 0.29
CLPTM1-201ENST00000337392 LINC01587Q99440 93 aa16.88■□□□□ 0.29
CLPTM1-201ENST00000337392 SYT8Q8NBV8 401 aa16.87■□□□□ 0.29
CLPTM1-201ENST00000337392 SPAG8Q99932 426 aaPredicted RBP16.87■□□□□ 0.29
CLPTM1-201ENST00000337392 MRPL16Q9NX20 251 aaKnown RBP16.86■□□□□ 0.29
CLPTM1-201ENST00000337392 H3BUT2 72 aa16.85■□□□□ 0.29
CLPTM1-201ENST00000337392 FHL3Q13643 280 aa16.85■□□□□ 0.29
CLPTM1-201ENST00000337392 CKS1BP61024 79 aa16.85■□□□□ 0.29
CLPTM1-201ENST00000337392 C9orf118A6NHY6 69 aa16.84■□□□□ 0.29
CLPTM1-201ENST00000337392 F8VRH5 84 aa16.84■□□□□ 0.29
CLPTM1-201ENST00000337392 RAB37Q96AX2 223 aa16.84■□□□□ 0.29
CLPTM1-201ENST00000337392 KIR2DL4Q99706 377 aa16.84■□□□□ 0.29
CLPTM1-201ENST00000337392 TRGV11A0A075B6L2 103 aa16.83■□□□□ 0.29
CLPTM1-201ENST00000337392 TEX48A0A1B0GUV7 120 aa16.83■□□□□ 0.28
CLPTM1-201ENST00000337392 H7C1H1 209 aa16.83■□□□□ 0.28
CLPTM1-201ENST00000337392 CYSLTR1Q9Y271 337 aa16.83■□□□□ 0.28
CLPTM1-201ENST00000337392 TRBV25-1A0A075B6N4 114 aa16.83■□□□□ 0.28
CLPTM1-201ENST00000337392 VCYO14598 125 aa16.83■□□□□ 0.28
CLPTM1-201ENST00000337392 HSD52Q0P140 79 aa16.83■□□□□ 0.28
CLPTM1-201ENST00000337392 RNASE1P07998 156 aaKnown RBP16.82■□□□□ 0.28
CLPTM1-201ENST00000337392 RPL24P83731 157 aaKnown RBP16.81■□□□□ 0.28
CLPTM1-201ENST00000337392 TRBV27A0A0K0K1C4 114 aa16.81■□□□□ 0.28
CLPTM1-201ENST00000337392 IGIPA6NJ69 53 aa16.81■□□□□ 0.28
CLPTM1-201ENST00000337392 GCSHP23434 173 aa16.81■□□□□ 0.28
CLPTM1-201ENST00000337392 CEMP1Q6PRD7 247 aaPredicted RBP16.81■□□□□ 0.28
CLPTM1-201ENST00000337392 FXYD2P54710 66 aa16.8■□□□□ 0.28
CLPTM1-201ENST00000337392 SEC11AP67812 179 aa16.8■□□□□ 0.28
CLPTM1-201ENST00000337392 TSSC4Q9Y5U2 329 aaPredicted RBP16.8■□□□□ 0.28
CLPTM1-201ENST00000337392 STHQ8IWL8 128 aa16.8■□□□□ 0.28
CLPTM1-201ENST00000337392 IGHV3-38A0A0C4DH36 116 aa16.79■□□□□ 0.28
CLPTM1-201ENST00000337392 H3BRM9 83 aa16.79■□□□□ 0.28
CLPTM1-201ENST00000337392 K7ERJ3 54 aa16.79■□□□□ 0.28
CLPTM1-201ENST00000337392 PPP1R17O96001 155 aa16.79■□□□□ 0.28
CLPTM1-201ENST00000337392 KRTAP10-3P60369 221 aa16.79■□□□□ 0.28
CLPTM1-201ENST00000337392 RNASE13Q5GAN3 156 aaKnown RBP16.79■□□□□ 0.28
CLPTM1-201ENST00000337392 C11orf86A6NJI1 115 aa16.79■□□□□ 0.28
CLPTM1-201ENST00000337392 A8MTW9 85 aa16.79■□□□□ 0.28
CLPTM1-201ENST00000337392 C11orf72Q8NBR9 251 aa16.79■□□□□ 0.28
CLPTM1-201ENST00000337392 CHAC1Q9BUX1 264 aa16.79■□□□□ 0.28
CLPTM1-201ENST00000337392 TRAV12-1A0A0B4J245 112 aa16.78■□□□□ 0.28
CLPTM1-201ENST00000337392 PLNP26678 52 aa16.78■□□□□ 0.28
CLPTM1-201ENST00000337392 C1orf158Q8N1D5 194 aa16.78■□□□□ 0.28
CLPTM1-201ENST00000337392 LY6G6DO95868 133 aa16.77■□□□□ 0.28
CLPTM1-201ENST00000337392 IGLV4-69A0A075B6H9 119 aa16.77■□□□□ 0.27
CLPTM1-201ENST00000337392 GAGE12HA6NDE8 117 aa16.77■□□□□ 0.27
CLPTM1-201ENST00000337392 ADARB2-AS1A8MUL3 147 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms