RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 VPS13AQ96RL7 3174 aa10.13□□□□□ -0.79
COL2A1-201ENST00000337299 TRGV1A0A0A0MS02 117 aa10.13□□□□□ -0.79
COL2A1-201ENST00000337299 hADV29S1A0JD25 119 aa10.12□□□□□ -0.79
COL2A1-201ENST00000337299 C10orf142B7Z368 130 aa10.12□□□□□ -0.79
COL2A1-201ENST00000337299 CRYGBP07316 175 aa10.12□□□□□ -0.79
COL2A1-201ENST00000337299 Q9HAA7 133 aa10.12□□□□□ -0.79
COL2A1-201ENST00000337299 H3BUX3 64 aa10.12□□□□□ -0.79
COL2A1-201ENST00000337299 MINOS1Q5TGZ0 78 aa10.12□□□□□ -0.79
COL2A1-201ENST00000337299 MINOS1-NBL1R4GNA1 71 aa10.12□□□□□ -0.79
COL2A1-201ENST00000337299 A0A0B4J2C4 111 aa10.11□□□□□ -0.79
COL2A1-201ENST00000337299 IGLV1-47P01700 117 aa10.11□□□□□ -0.79
COL2A1-201ENST00000337299 IGHV3-30-3P0DP02 117 aa10.11□□□□□ -0.79
COL2A1-201ENST00000337299 SEM1Q6ZVN7 128 aa10.11□□□□□ -0.79
COL2A1-201ENST00000337299 MRAPQ8TCY5 172 aa10.11□□□□□ -0.79
COL2A1-201ENST00000337299 UBE2E2Q96LR5 201 aa10.11□□□□□ -0.79
COL2A1-201ENST00000337299 DAZ1Q9NQZ3 744 aaKnown RBP10.11□□□□□ -0.79
COL2A1-201ENST00000337299 OOSP1A8MZH6 123 aa10.11□□□□□ -0.79
COL2A1-201ENST00000337299 ACYP1P07311 99 aa10.11□□□□□ -0.79
COL2A1-201ENST00000337299 TMEM86BQ8N661 226 aa10.11□□□□□ -0.79
COL2A1-201ENST00000337299 FN1P02751 2386 aaKnown RBP10.11□□□□□ -0.79
COL2A1-201ENST00000337299 IGHV1OR15-1A0A075B7D0 117 aa10.11□□□□□ -0.79
COL2A1-201ENST00000337299 ATOX1O00244 68 aa10.1□□□□□ -0.79
COL2A1-201ENST00000337299 MAPK1IP1LQ8NDC0 245 aa10.1□□□□□ -0.79
COL2A1-201ENST00000337299 BPESC1Q9GZL8 116 aa10.1□□□□□ -0.79
COL2A1-201ENST00000337299 C11orf21Q9P2W6 132 aa10.1□□□□□ -0.79
COL2A1-201ENST00000337299 LINC00694P0DN24 101 aa10.1□□□□□ -0.79
COL2A1-201ENST00000337299 C6orf226Q5I0X4 101 aa10.1□□□□□ -0.79
COL2A1-201ENST00000337299 IGHV7-81A0A0B4J1V7 117 aa10.1□□□□□ -0.79
COL2A1-201ENST00000337299 NXPH4O95158 308 aa10.1□□□□□ -0.79
COL2A1-201ENST00000337299 IGFL2Q6UWQ7 119 aa10.1□□□□□ -0.79
COL2A1-201ENST00000337299 KAAG1Q9UBP8 84 aa10.1□□□□□ -0.79
COL2A1-201ENST00000337299 RBM3P98179 157 aaKnown RBP10.1□□□□□ -0.79
COL2A1-201ENST00000337299 SDIM1Q6ZPB5 146 aa10.1□□□□□ -0.79
COL2A1-201ENST00000337299 A0A0J9YXY3 114 aa10.09□□□□□ -0.79
COL2A1-201ENST00000337299 NRACQ8N912 160 aa10.09□□□□□ -0.79
COL2A1-201ENST00000337299 C8orf31Q8N9H6 132 aa10.09□□□□□ -0.79
COL2A1-201ENST00000337299 AJUBAQ96IF1 538 aa10.09□□□□□ -0.79
COL2A1-201ENST00000337299 CENPEQ02224 2701 aa10.09□□□□□ -0.79
COL2A1-201ENST00000337299 IGHV3-30P01768 117 aa10.09□□□□□ -0.79
COL2A1-201ENST00000337299 IGHV3-30-5P0DP03 117 aa10.09□□□□□ -0.79
COL2A1-201ENST00000337299 RPL36AP83881 106 aaKnown RBP10.09□□□□□ -0.79
COL2A1-201ENST00000337299 RBMY1FQ15415 496 aaKnown RBP10.09□□□□□ -0.79
COL2A1-201ENST00000337299 C5orf47Q569G3 176 aa10.09□□□□□ -0.79
COL2A1-201ENST00000337299 C11orf44Q8N8P7 122 aa10.09□□□□□ -0.79
COL2A1-201ENST00000337299 ZNRF2Q8NHG8 242 aa10.09□□□□□ -0.79
COL2A1-201ENST00000337299 RPL36ALQ969Q0 106 aaKnown RBP10.09□□□□□ -0.79
COL2A1-201ENST00000337299 MUC22E2RYF6 1773 aaPredicted RBP10.08□□□□□ -0.8
COL2A1-201ENST00000337299 DEFB131AP59861 70 aa10.08□□□□□ -0.8
COL2A1-201ENST00000337299 S100A7L2Q5SY68 101 aa10.08□□□□□ -0.8
COL2A1-201ENST00000337299 C22orf34Q6ZV56 151 aa10.08□□□□□ -0.8
COL2A1-201ENST00000337299 TIMM17AQ99595 171 aa10.08□□□□□ -0.8
COL2A1-201ENST00000337299 UQCRQO14949 82 aa10.08□□□□□ -0.8
COL2A1-201ENST00000337299 LINC00643Q86TS7 51 aa10.08□□□□□ -0.8
COL2A1-201ENST00000337299 A8MZ25 164 aa10.08□□□□□ -0.8
COL2A1-201ENST00000337299 LINC01548A6NM66 108 aa10.07□□□□□ -0.8
COL2A1-201ENST00000337299 KLK5Q9Y337 293 aaPredicted RBP10.07□□□□□ -0.8
COL2A1-201ENST00000337299 TMEM243Q9BU79 118 aa10.07□□□□□ -0.8
COL2A1-201ENST00000337299 UBL5Q9BZL1 73 aa10.07□□□□□ -0.8
COL2A1-201ENST00000337299 PPDPFQ9H3Y8 114 aa10.07□□□□□ -0.8
COL2A1-201ENST00000337299 FLNBO75369 2602 aaKnown RBP10.07□□□□□ -0.8
COL2A1-201ENST00000337299 DOPEY1Q5JWR5 2465 aa10.07□□□□□ -0.8
COL2A1-201ENST00000337299 DNAH14Q0VDD8 3507 aa10.06□□□□□ -0.8
COL2A1-201ENST00000337299 SMCPP49901 116 aaPredicted RBP10.06□□□□□ -0.8
COL2A1-201ENST00000337299 ZNF415Q09FC8 603 aa10.06□□□□□ -0.8
COL2A1-201ENST00000337299 C3orf22Q8N5N4 141 aa10.06□□□□□ -0.8
COL2A1-201ENST00000337299 PTPRBP23467 1997 aa10.06□□□□□ -0.8
COL2A1-201ENST00000337299 TRGV4A0A0C4DH28 118 aa10.06□□□□□ -0.8
COL2A1-201ENST00000337299 NDUFA7O95182 113 aa10.06□□□□□ -0.8
COL2A1-201ENST00000337299 PKD1L2Q7Z442 2459 aa10.06□□□□□ -0.8
COL2A1-201ENST00000337299 CEP192Q8TEP8 1941 aa10.06□□□□□ -0.8
COL2A1-201ENST00000337299 ZNF22P17026 224 aaPredicted RBP10.06□□□□□ -0.8
COL2A1-201ENST00000337299 SMAD5-AS1Q9Y6J3 95 aa10.06□□□□□ -0.8
COL2A1-201ENST00000337299 UBE2D1P51668 147 aa10.05□□□□□ -0.8
COL2A1-201ENST00000337299 DAZ2Q13117 558 aaKnown RBP10.05□□□□□ -0.8
COL2A1-201ENST00000337299 C9orf47Q6ZRZ4 202 aa10.05□□□□□ -0.8
COL2A1-201ENST00000337299 DAZ4Q86SG3 579 aaKnown RBP10.05□□□□□ -0.8
COL2A1-201ENST00000337299 PIP4P2Q8N4L2 257 aa10.05□□□□□ -0.8
COL2A1-201ENST00000337299 DNAJC30Q96LL9 226 aa10.05□□□□□ -0.8
COL2A1-201ENST00000337299 C14orf132Q9NPU4 83 aa10.05□□□□□ -0.8
COL2A1-201ENST00000337299 DAZ3Q9NR90 486 aaKnown RBP10.05□□□□□ -0.8
COL2A1-201ENST00000337299 LOC107984640A0A0U1RRK4 108 aa10.05□□□□□ -0.8
COL2A1-201ENST00000337299 LENEPQ9Y5L5 61 aa10.05□□□□□ -0.8
COL2A1-201ENST00000337299 A0A1W2PRX2 142 aa10.05□□□□□ -0.8
COL2A1-201ENST00000337299 FAM223BA6NKX1 122 aa10.05□□□□□ -0.8
COL2A1-201ENST00000337299 CFHR3Q02985 330 aa10.05□□□□□ -0.8
COL2A1-201ENST00000337299 FAM223AQ8IWN6 122 aa10.05□□□□□ -0.8
COL2A1-201ENST00000337299 MDFICQ9P1T7 246 aa10.05□□□□□ -0.8
COL2A1-201ENST00000337299 XCL2Q9UBD3 114 aa10.04□□□□□ -0.8
COL2A1-201ENST00000337299 OVOL2Q9BRP0 275 aa10.04□□□□□ -0.8
COL2A1-201ENST00000337299 ZMAT4Q9H898 229 aa10.04□□□□□ -0.8
COL2A1-201ENST00000337299 Q6ZSV7 163 aa10.04□□□□□ -0.8
COL2A1-201ENST00000337299 FAM110AQ9BQ89 295 aa10.04□□□□□ -0.8
COL2A1-201ENST00000337299 ACANP16112 2415 aa10.04□□□□□ -0.8
COL2A1-201ENST00000337299 LRP4O75096 1905 aa10.04□□□□□ -0.8
COL2A1-201ENST00000337299 LAMA1P25391 3075 aa10.03□□□□□ -0.8
COL2A1-201ENST00000337299 P0DMU3 169 aa10.03□□□□□ -0.8
COL2A1-201ENST00000337299 FAM231AP0DMU4 169 aa10.03□□□□□ -0.8
COL2A1-201ENST00000337299 FAM231CP0DMU5 169 aa10.03□□□□□ -0.8
COL2A1-201ENST00000337299 C20orf203Q8NBC4 194 aa10.03□□□□□ -0.8
COL2A1-201ENST00000337299 CITED2Q99967 270 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms