RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 PRSS3P2Q8NHM4 247 aa6.96□□□□□ -1.3
SYN3-201ENST00000332840 LINC00476Q8WZB0 136 aa6.96□□□□□ -1.3
SYN3-201ENST00000332840 SAMD10Q9BYL1 202 aa6.96□□□□□ -1.3
SYN3-201ENST00000332840 MAP1LC3AQ9H492 121 aa6.96□□□□□ -1.3
SYN3-201ENST00000332840 GSN-AS1Q9NRJ2 163 aa6.96□□□□□ -1.3
SYN3-201ENST00000332840 ALMS1Q8TCU4 4167 aa6.96□□□□□ -1.3
SYN3-201ENST00000332840 TNFRSF6BO95407 300 aa6.95□□□□□ -1.3
SYN3-201ENST00000332840 NCR2O95944 276 aa6.95□□□□□ -1.3
SYN3-201ENST00000332840 PPP1R17O96001 155 aa6.95□□□□□ -1.3
SYN3-201ENST00000332840 NPYP01303 97 aa6.95□□□□□ -1.3
SYN3-201ENST00000332840 MGPP08493 103 aa6.95□□□□□ -1.3
SYN3-201ENST00000332840 SPART-AS1P0CW21 52 aa6.95□□□□□ -1.3
SYN3-201ENST00000332840 PMCHP20382 165 aa6.95□□□□□ -1.3
SYN3-201ENST00000332840 ZNF876PQ49A33 203 aa6.95□□□□□ -1.3
SYN3-201ENST00000332840 FA2HQ7L5A8 372 aa6.95□□□□□ -1.3
SYN3-201ENST00000332840 KIF25-AS1Q9Y6Z4 181 aa6.95□□□□□ -1.3
SYN3-201ENST00000332840 PRSS47A8MTI9 375 aa6.94□□□□□ -1.3
SYN3-201ENST00000332840 AMTP48728 403 aa6.94□□□□□ -1.3
SYN3-201ENST00000332840 LINC00315P59091 139 aa6.94□□□□□ -1.3
SYN3-201ENST00000332840 C11orf72Q8NBR9 251 aa6.94□□□□□ -1.3
SYN3-201ENST00000332840 TMEM263Q8WUH6 116 aaKnown RBP6.94□□□□□ -1.3
SYN3-201ENST00000332840 URB1-AS1Q96HZ7 61 aa6.94□□□□□ -1.3
SYN3-201ENST00000332840 NDUFAF3Q9BU61 184 aa6.94□□□□□ -1.3
SYN3-201ENST00000332840 JPT2Q9H910 190 aa6.94□□□□□ -1.3
SYN3-201ENST00000332840 LOC389332A0A1B0GUA5 103 aa6.93□□□□□ -1.3
SYN3-201ENST00000332840 A8MWV9 139 aa6.93□□□□□ -1.3
SYN3-201ENST00000332840 LY6G6CO95867 125 aa6.93□□□□□ -1.3
SYN3-201ENST00000332840 PRM2P04554 102 aa6.93□□□□□ -1.3
SYN3-201ENST00000332840 CRYGDP07320 174 aa6.93□□□□□ -1.3
SYN3-201ENST00000332840 SMIM6P0DI80 62 aa6.93□□□□□ -1.3
SYN3-201ENST00000332840 GATA1P15976 413 aaPredicted RBP6.93□□□□□ -1.3
SYN3-201ENST00000332840 AZU1P20160 251 aa6.93□□□□□ -1.3
SYN3-201ENST00000332840 IFI27P40305 119 aaPredicted RBP6.93□□□□□ -1.3
SYN3-201ENST00000332840 LGALS9CQ6DKI2 356 aa6.93□□□□□ -1.3
SYN3-201ENST00000332840 Q6ZTC4 211 aa6.93□□□□□ -1.3
SYN3-201ENST00000332840 NRACQ8N912 160 aa6.93□□□□□ -1.3
SYN3-201ENST00000332840 NXT2Q9NPJ8 142 aaKnown RBP6.93□□□□□ -1.3
SYN3-201ENST00000332840 AP5S1Q9NUS5 200 aa6.93□□□□□ -1.3
SYN3-201ENST00000332840 A0A087WWL8 130 aa6.92□□□□□ -1.3
SYN3-201ENST00000332840 DEFB131BA0A096LNP1 70 aa6.92□□□□□ -1.3
SYN3-201ENST00000332840 TRAV26-2A0A0B4J265 109 aa6.92□□□□□ -1.3
SYN3-201ENST00000332840 F5H697 171 aa6.92□□□□□ -1.3
SYN3-201ENST00000332840 GAS8-AS1O95177 125 aa6.92□□□□□ -1.3
SYN3-201ENST00000332840 EMP1P54849 157 aa6.92□□□□□ -1.3
SYN3-201ENST00000332840 LINC00518Q8N0U6 118 aa6.92□□□□□ -1.3
SYN3-201ENST00000332840 FAM19A2Q8N3H0 131 aa6.92□□□□□ -1.3
SYN3-201ENST00000332840 Q8N8P6 123 aa6.92□□□□□ -1.3
SYN3-201ENST00000332840 RNASE8Q8TDE3 154 aaKnown RBP6.92□□□□□ -1.3
SYN3-201ENST00000332840 RASL10AQ92737 203 aa6.92□□□□□ -1.3
SYN3-201ENST00000332840 C16orf74Q96GX8 76 aa6.92□□□□□ -1.3
SYN3-201ENST00000332840 C20orf78Q9BR46 151 aa6.92□□□□□ -1.3
SYN3-201ENST00000332840 DKK2Q9UBU2 259 aa6.92□□□□□ -1.3
SYN3-201ENST00000332840 LYRM9A8MSI8 78 aa6.91□□□□□ -1.3
SYN3-201ENST00000332840 IGLL5B9A064 214 aa6.91□□□□□ -1.3
SYN3-201ENST00000332840 RHODO00212 210 aa6.91□□□□□ -1.3
SYN3-201ENST00000332840 RS1O15537 224 aa6.91□□□□□ -1.3
SYN3-201ENST00000332840 DAZ2Q13117 558 aaKnown RBP6.91□□□□□ -1.3
SYN3-201ENST00000332840 JOSD1Q15040 202 aaPredicted RBP6.91□□□□□ -1.3
SYN3-201ENST00000332840 ZNF56Q15929 161 aa6.91□□□□□ -1.3
SYN3-201ENST00000332840 C12orf74Q32Q52 190 aa6.91□□□□□ -1.3
SYN3-201ENST00000332840 FAM74A4Q5TZK3 123 aa6.91□□□□□ -1.3
SYN3-201ENST00000332840 FAM222AQ5U5X8 452 aa6.91□□□□□ -1.3
SYN3-201ENST00000332840 SUMO4Q6EEV6 95 aa6.91□□□□□ -1.3
SYN3-201ENST00000332840 CELA1Q9UNI1 258 aa6.91□□□□□ -1.3
SYN3-201ENST00000332840 IGHV1-24A0A0C4DH33 117 aa6.9□□□□□ -1.3
SYN3-201ENST00000332840 LINC01546A6NGU7 62 aa6.9□□□□□ -1.3
SYN3-201ENST00000332840 H7C1H1 209 aa6.9□□□□□ -1.3
SYN3-201ENST00000332840 DAD1P61803 113 aa6.9□□□□□ -1.3
SYN3-201ENST00000332840 SUMO2P61956 95 aaKnown RBP6.9□□□□□ -1.3
SYN3-201ENST00000332840 RPL32P62910 135 aaKnown RBP6.9□□□□□ -1.3
SYN3-201ENST00000332840 LGALS9BQ3B8N2 356 aa6.9□□□□□ -1.3
SYN3-201ENST00000332840 PYY3Q5JQD4 70 aa6.9□□□□□ -1.3
SYN3-201ENST00000332840 C12orf57Q99622 126 aa6.9□□□□□ -1.3
SYN3-201ENST00000332840 MRPL16Q9NX20 251 aaKnown RBP6.9□□□□□ -1.3
SYN3-201ENST00000332840 IGLV2-18A0A075B6J9 118 aa6.89□□□□□ -1.31
SYN3-201ENST00000332840 TRGV1A0A0A0MS02 117 aa6.89□□□□□ -1.31
SYN3-201ENST00000332840 TRBV6-5A0A0K0K1A5 114 aa6.89□□□□□ -1.31
SYN3-201ENST00000332840 K7EMI3 77 aa6.89□□□□□ -1.31
SYN3-201ENST00000332840 LEPROTL1O95214 131 aa6.89□□□□□ -1.31
SYN3-201ENST00000332840 CFAP126Q5VTH2 177 aa6.89□□□□□ -1.31
SYN3-201ENST00000332840 ZFP2Q6ZN57 461 aa6.89□□□□□ -1.31
SYN3-201ENST00000332840 RPL39LQ96EH5 51 aaKnown RBP6.89□□□□□ -1.31
SYN3-201ENST00000332840 SMIM2Q9BVW6 85 aa6.89□□□□□ -1.31
SYN3-201ENST00000332840 ST20Q9HBF5 79 aa6.89□□□□□ -1.31
SYN3-201ENST00000332840 NACAE9PAV3 2078 aa6.88□□□□□ -1.31
SYN3-201ENST00000332840 M0QY20 66 aa6.88□□□□□ -1.31
SYN3-201ENST00000332840 CIDEAO60543 219 aa6.88□□□□□ -1.31
SYN3-201ENST00000332840 HBDP02042 147 aa6.88□□□□□ -1.31
SYN3-201ENST00000332840 P0DMU3 169 aa6.88□□□□□ -1.31
SYN3-201ENST00000332840 FAM231AP0DMU4 169 aa6.88□□□□□ -1.31
SYN3-201ENST00000332840 FAM231CP0DMU5 169 aa6.88□□□□□ -1.31
SYN3-201ENST00000332840 FCER1GP30273 86 aa6.88□□□□□ -1.31
SYN3-201ENST00000332840 PMCHL1Q16048 86 aa6.88□□□□□ -1.31
SYN3-201ENST00000332840 UFSP1Q6NVU6 142 aa6.88□□□□□ -1.31
SYN3-201ENST00000332840 OR4C5Q8NGB2 326 aa6.88□□□□□ -1.31
SYN3-201ENST00000332840 NOP10Q9NPE3 64 aaKnown RBP6.88□□□□□ -1.31
SYN3-201ENST00000332840 NIT2Q9NQR4 276 aa6.88□□□□□ -1.31
SYN3-201ENST00000332840 HSPB8Q9UJY1 196 aa6.88□□□□□ -1.31
SYN3-201ENST00000332840 APLNQ9ULZ1 77 aa6.88□□□□□ -1.31
SYN3-201ENST00000332840 TRAV4A0A0B4J268 109 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms