RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 K7EP34 96 aa10.67□□□□□ -0.7
TPM3-206ENST00000330188 K7ERJ3 54 aa10.67□□□□□ -0.7
TPM3-206ENST00000330188 HTN1P15515 57 aa10.67□□□□□ -0.7
TPM3-206ENST00000330188 DEFB114Q30KQ6 69 aa10.67□□□□□ -0.7
TPM3-206ENST00000330188 NHP2Q9NX24 153 aaKnown RBP10.67□□□□□ -0.7
TPM3-206ENST00000330188 APCP25054 2843 aa10.67□□□□□ -0.7
TPM3-206ENST00000330188 TRBV7-3A0A075B6L6 115 aa10.67□□□□□ -0.7
TPM3-206ENST00000330188 EMP1P54849 157 aa10.67□□□□□ -0.7
TPM3-206ENST00000330188 PAPPA-AS1Q5QFB9 102 aa10.67□□□□□ -0.7
TPM3-206ENST00000330188 SPAG8Q99932 426 aaPredicted RBP10.67□□□□□ -0.7
TPM3-206ENST00000330188 GAGE12BA1L429 117 aa10.66□□□□□ -0.7
TPM3-206ENST00000330188 PRM2P04554 102 aa10.66□□□□□ -0.7
TPM3-206ENST00000330188 HIST1H4GQ99525 98 aa10.66□□□□□ -0.7
TPM3-206ENST00000330188 P0DMU3 169 aa10.66□□□□□ -0.7
TPM3-206ENST00000330188 FAM231AP0DMU4 169 aa10.66□□□□□ -0.7
TPM3-206ENST00000330188 FAM231CP0DMU5 169 aa10.66□□□□□ -0.7
TPM3-206ENST00000330188 CD300EQ496F6 205 aaPredicted RBP10.66□□□□□ -0.7
TPM3-206ENST00000330188 SAMD5Q5TGI4 173 aa10.66□□□□□ -0.7
TPM3-206ENST00000330188 TEX29Q8N6K0 151 aa10.66□□□□□ -0.7
TPM3-206ENST00000330188 EDA2RQ9HAV5 297 aa10.66□□□□□ -0.7
TPM3-206ENST00000330188 I3L3M4 83 aa10.65□□□□□ -0.7
TPM3-206ENST00000330188 HIST2H2BCQ6DN03 193 aa10.65□□□□□ -0.7
TPM3-206ENST00000330188 ESM1Q9NQ30 184 aa10.64□□□□□ -0.71
TPM3-206ENST00000330188 IGHV3-73A0A0B4J1V6 119 aa10.64□□□□□ -0.71
TPM3-206ENST00000330188 ZNF815PA8K554 130 aa10.64□□□□□ -0.71
TPM3-206ENST00000330188 M0R2P5 195 aa10.64□□□□□ -0.71
TPM3-206ENST00000330188 RBX1P62877 108 aa10.64□□□□□ -0.71
TPM3-206ENST00000330188 C20orf203Q8NBC4 194 aa10.64□□□□□ -0.71
TPM3-206ENST00000330188 ZNRF2Q8NHG8 242 aa10.64□□□□□ -0.71
TPM3-206ENST00000330188 RAX2Q96IS3 184 aa10.64□□□□□ -0.71
TPM3-206ENST00000330188 SPCS1Q9Y6A9 102 aa10.64□□□□□ -0.71
TPM3-206ENST00000330188 NACAE9PAV3 2078 aa10.63□□□□□ -0.71
TPM3-206ENST00000330188 FABP2P12104 132 aa10.63□□□□□ -0.71
TPM3-206ENST00000330188 PROK1P58294 105 aa10.63□□□□□ -0.71
TPM3-206ENST00000330188 HERVK_113P61574 105 aa10.63□□□□□ -0.71
TPM3-206ENST00000330188 ZNF415Q09FC8 603 aa10.63□□□□□ -0.71
TPM3-206ENST00000330188 C12orf74Q32Q52 190 aa10.63□□□□□ -0.71
TPM3-206ENST00000330188 PLEKHB2Q96CS7 222 aa10.63□□□□□ -0.71
TPM3-206ENST00000330188 OPRPNQ99935 248 aaPredicted RBP10.63□□□□□ -0.71
TPM3-206ENST00000330188 ITPR3Q14573 2671 aa10.62□□□□□ -0.71
TPM3-206ENST00000330188 EPG5Q9HCE0 2579 aa10.62□□□□□ -0.71
TPM3-206ENST00000330188 A8MWV9 139 aa10.62□□□□□ -0.71
TPM3-206ENST00000330188 PIK3CD-AS1Q5SR53 167 aa10.62□□□□□ -0.71
TPM3-206ENST00000330188 PTH2Q96A98 100 aa10.62□□□□□ -0.71
TPM3-206ENST00000330188 LINC00467Q9BRT7 94 aa10.62□□□□□ -0.71
TPM3-206ENST00000330188 SCGB2A2Q13296 93 aa10.61□□□□□ -0.71
TPM3-206ENST00000330188 FHL3Q13643 280 aa10.61□□□□□ -0.71
TPM3-206ENST00000330188 OCIAD2Q56VL3 154 aa10.61□□□□□ -0.71
TPM3-206ENST00000330188 C11orf44Q8N8P7 122 aa10.61□□□□□ -0.71
TPM3-206ENST00000330188 C11orf72Q8NBR9 251 aa10.61□□□□□ -0.71
TPM3-206ENST00000330188 OR5A1Q8NGJ0 315 aa10.61□□□□□ -0.71
TPM3-206ENST00000330188 TMEM170BQ5T4T1 132 aa10.61□□□□□ -0.71
TPM3-206ENST00000330188 NFE4Q86UQ8 179 aa10.61□□□□□ -0.71
TPM3-206ENST00000330188 LINC01587Q99440 93 aa10.61□□□□□ -0.71
TPM3-206ENST00000330188 CBY1Q9Y3M2 126 aa10.61□□□□□ -0.71
TPM3-206ENST00000330188 A0A1B0GWB2 263 aa10.6□□□□□ -0.71
TPM3-206ENST00000330188 A0A1W2PRX2 142 aa10.6□□□□□ -0.71
TPM3-206ENST00000330188 IGLL5B9A064 214 aa10.6□□□□□ -0.71
TPM3-206ENST00000330188 INSP01308 110 aa10.6□□□□□ -0.71
TPM3-206ENST00000330188 CD28P10747 220 aa10.6□□□□□ -0.71
TPM3-206ENST00000330188 KRTAP1-1Q07627 177 aa10.6□□□□□ -0.71
TPM3-206ENST00000330188 ODF3L2Q3SX64 289 aa10.6□□□□□ -0.71
TPM3-206ENST00000330188 TRAV25A0A0B4J276 109 aa10.6□□□□□ -0.71
TPM3-206ENST00000330188 TSPEAR-AS2P59090 65 aa10.6□□□□□ -0.71
TPM3-206ENST00000330188 CFAP126Q5VTH2 177 aa10.6□□□□□ -0.71
TPM3-206ENST00000330188 SCGB1D4Q6XE38 83 aa10.6□□□□□ -0.71
TPM3-206ENST00000330188 CLUHP3Q96NS8 147 aa10.6□□□□□ -0.71
TPM3-206ENST00000330188 IGLV4-3A0A075B6K6 122 aa10.59□□□□□ -0.71
TPM3-206ENST00000330188 Q6ZSN1 163 aa10.59□□□□□ -0.71
TPM3-206ENST00000330188 MYO9AB2RTY4 2548 aa10.59□□□□□ -0.71
TPM3-206ENST00000330188 CCL24O00175 119 aa10.58□□□□□ -0.72
TPM3-206ENST00000330188 Q9UF83 564 aa10.58□□□□□ -0.72
TPM3-206ENST00000330188 TLN2Q9Y4G6 2542 aa10.58□□□□□ -0.72
TPM3-206ENST00000330188 CUBNO60494 3623 aa10.58□□□□□ -0.72
TPM3-206ENST00000330188 SPXQ9BT56 116 aa10.58□□□□□ -0.72
TPM3-206ENST00000330188 TNFRSF18Q9Y5U5 241 aa10.58□□□□□ -0.72
TPM3-206ENST00000330188 A0A0J9YY99 117 aa10.57□□□□□ -0.72
TPM3-206ENST00000330188 BEAN1Q3B7T3 259 aa10.57□□□□□ -0.72
TPM3-206ENST00000330188 ZNF479Q96JC4 524 aa10.57□□□□□ -0.72
TPM3-206ENST00000330188 MRPL16Q9NX20 251 aaKnown RBP10.57□□□□□ -0.72
TPM3-206ENST00000330188 FAM104AQ969W3 186 aa10.57□□□□□ -0.72
TPM3-206ENST00000330188 XCL2Q9UBD3 114 aa10.57□□□□□ -0.72
TPM3-206ENST00000330188 PYGO1Q9Y3Y4 419 aa10.57□□□□□ -0.72
TPM3-206ENST00000330188 SONP18583 2426 aaKnown RBP10.56□□□□□ -0.72
TPM3-206ENST00000330188 TMEM223A0PJW6 202 aa10.56□□□□□ -0.72
TPM3-206ENST00000330188 RHODO00212 210 aa10.56□□□□□ -0.72
TPM3-206ENST00000330188 STHQ8IWL8 128 aa10.56□□□□□ -0.72
TPM3-206ENST00000330188 AMELXQ99217 191 aa10.56□□□□□ -0.72
TPM3-206ENST00000330188 CITED2Q99967 270 aaPredicted RBP10.56□□□□□ -0.72
TPM3-206ENST00000330188 VCX2Q9H322 139 aa10.56□□□□□ -0.72
TPM3-206ENST00000330188 J3QQQ9 107 aa10.55□□□□□ -0.72
TPM3-206ENST00000330188 ZNF22P17026 224 aaPredicted RBP10.55□□□□□ -0.72
TPM3-206ENST00000330188 AZU1P20160 251 aa10.55□□□□□ -0.72
TPM3-206ENST00000330188 SRSF9Q13242 221 aaKnown RBP eCLIP10.55□□□□□ -0.72
TPM3-206ENST00000330188 RRN3P1Q2M238 152 aa10.55□□□□□ -0.72
TPM3-206ENST00000330188 A0A0J9YXV3 536 aa10.55□□□□□ -0.72
TPM3-206ENST00000330188 RS1O15537 224 aa10.55□□□□□ -0.72
TPM3-206ENST00000330188 IGHV3-53P01767 116 aa10.55□□□□□ -0.72
TPM3-206ENST00000330188 RNF151Q2KHN1 245 aa10.55□□□□□ -0.72
TPM3-206ENST00000330188 C1orf158Q8N1D5 194 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 162.3 ms