RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 ODF1Q14990 250 aa10.8□□□□□ -0.68
TPM3-205ENST00000328159 ZFP2Q6ZN57 461 aa10.8□□□□□ -0.68
TPM3-205ENST00000328159 TMEM263Q8WUH6 116 aaKnown RBP10.8□□□□□ -0.68
TPM3-205ENST00000328159 NIPBLQ6KC79 2804 aaeCLIP10.8□□□□□ -0.686e-7■■■□□ 15
TPM3-205ENST00000328159 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.8□□□□□ -0.68
TPM3-205ENST00000328159 RHODO00212 210 aa10.8□□□□□ -0.68
TPM3-205ENST00000328159 Q6ZN92 141 aa10.8□□□□□ -0.68
TPM3-205ENST00000328159 GTSCR1Q86UQ5 136 aa10.8□□□□□ -0.68
TPM3-205ENST00000328159 SCGB3A1Q96QR1 104 aa10.8□□□□□ -0.68
TPM3-205ENST00000328159 G0S2P27469 103 aa10.79□□□□□ -0.68
TPM3-205ENST00000328159 CTAG1AP78358 180 aa10.79□□□□□ -0.68
TPM3-205ENST00000328159 CSNK1G2-AS1Q8NCQ2 148 aa10.79□□□□□ -0.68
TPM3-205ENST00000328159 HNRNPA3P51991 378 aaKnown RBP10.78□□□□□ -0.68
TPM3-205ENST00000328159 DEFB104AQ8WTQ1 72 aa10.78□□□□□ -0.68
TPM3-205ENST00000328159 CYSLTR1Q9Y271 337 aa10.78□□□□□ -0.68
TPM3-205ENST00000328159 RIPPLY3P57055 190 aa10.77□□□□□ -0.68
TPM3-205ENST00000328159 Q6ZSN1 163 aa10.77□□□□□ -0.68
TPM3-205ENST00000328159 ZMAT4Q9H898 229 aa10.77□□□□□ -0.68
TPM3-205ENST00000328159 TEP1Q99973 2627 aaKnown RBP10.77□□□□□ -0.69
TPM3-205ENST00000328159 TRGV1A0A0A0MS02 117 aa10.77□□□□□ -0.69
TPM3-205ENST00000328159 LINC01549A6NIU2 74 aa10.77□□□□□ -0.69
TPM3-205ENST00000328159 EREGO14944 169 aa10.77□□□□□ -0.69
TPM3-205ENST00000328159 P0DMU3 169 aa10.77□□□□□ -0.69
TPM3-205ENST00000328159 FAM231AP0DMU4 169 aa10.77□□□□□ -0.69
TPM3-205ENST00000328159 FAM231CP0DMU5 169 aa10.77□□□□□ -0.69
TPM3-205ENST00000328159 ERASQ7Z444 233 aa10.77□□□□□ -0.69
TPM3-205ENST00000328159 MRPL52Q86TS9 123 aaKnown RBP10.77□□□□□ -0.69
TPM3-205ENST00000328159 ATRQ13535 2644 aa10.77□□□□□ -0.69
TPM3-205ENST00000328159 TENM1Q9UKZ4 2725 aa10.77□□□□□ -0.69
TPM3-205ENST00000328159 NOTCH3Q9UM47 2321 aa10.76□□□□□ -0.69
TPM3-205ENST00000328159 A0A087WX48 190 aa10.76□□□□□ -0.69
TPM3-205ENST00000328159 TRAV12-1A0A0B4J245 112 aa10.76□□□□□ -0.69
TPM3-205ENST00000328159 I3L3M4 83 aa10.76□□□□□ -0.69
TPM3-205ENST00000328159 M0R143 59 aa10.76□□□□□ -0.69
TPM3-205ENST00000328159 ANKRD39Q53RE8 183 aa10.76□□□□□ -0.69
TPM3-205ENST00000328159 C16orf74Q96GX8 76 aa10.76□□□□□ -0.69
TPM3-205ENST00000328159 SNHG12Q9BXW3 62 aa10.76□□□□□ -0.69
TPM3-205ENST00000328159 TP53TG1Q9Y2A0 90 aa10.76□□□□□ -0.69
TPM3-205ENST00000328159 DPM2O94777 84 aa10.75□□□□□ -0.69
TPM3-205ENST00000328159 TSHBP01222 138 aa10.75□□□□□ -0.69
TPM3-205ENST00000328159 IGHV3-53P01767 116 aa10.75□□□□□ -0.69
TPM3-205ENST00000328159 DAZ2Q13117 558 aaKnown RBP10.75□□□□□ -0.69
TPM3-205ENST00000328159 RHOHQ15669 191 aa10.75□□□□□ -0.69
TPM3-205ENST00000328159 STPG4Q8N801 248 aa10.75□□□□□ -0.69
TPM3-205ENST00000328159 TNFRSF18Q9Y5U5 241 aa10.75□□□□□ -0.69
TPM3-205ENST00000328159 IGKCP01834 107 aa10.75□□□□□ -0.69
TPM3-205ENST00000328159 SLC25A34Q6PIV7 304 aa10.75□□□□□ -0.69
TPM3-205ENST00000328159 Q6ZTI0 123 aa10.75□□□□□ -0.69
TPM3-205ENST00000328159 NEXN-AS1Q8NBZ9 246 aa10.75□□□□□ -0.69
TPM3-205ENST00000328159 OR4C5Q8NGB2 326 aa10.75□□□□□ -0.69
TPM3-205ENST00000328159 MRPL35Q9NZE8 188 aaKnown RBP10.75□□□□□ -0.69
TPM3-205ENST00000328159 PLAC8L1A1L4L8 177 aa10.74□□□□□ -0.69
TPM3-205ENST00000328159 RRN3P1Q2M238 152 aa10.74□□□□□ -0.69
TPM3-205ENST00000328159 WFDC9Q8NEX5 89 aa10.74□□□□□ -0.69
TPM3-205ENST00000328159 BAALCQ8WXS3 180 aa10.74□□□□□ -0.69
TPM3-205ENST00000328159 NOP10Q9NPE3 64 aaKnown RBP10.74□□□□□ -0.69
TPM3-205ENST00000328159 MRPS16Q9Y3D3 137 aaKnown RBP10.74□□□□□ -0.69
TPM3-205ENST00000328159 COX8AP10176 69 aa10.73□□□□□ -0.69
TPM3-205ENST00000328159 RPL39P62891 51 aaKnown RBP10.73□□□□□ -0.69
TPM3-205ENST00000328159 LBHQ53QV2 105 aaPredicted RBP10.73□□□□□ -0.69
TPM3-205ENST00000328159 DNAJC30Q96LL9 226 aa10.73□□□□□ -0.69
TPM3-205ENST00000328159 TP73-AS1Q9UF72 201 aa10.73□□□□□ -0.69
TPM3-205ENST00000328159 IGIPA6NJ69 53 aa10.72□□□□□ -0.69
TPM3-205ENST00000328159 KRTAP24-1Q3LI83 254 aa10.72□□□□□ -0.69
TPM3-205ENST00000328159 TMEM141Q96I45 108 aa10.72□□□□□ -0.69
TPM3-205ENST00000328159 C2orf88Q9BSF0 95 aa10.72□□□□□ -0.69
TPM3-205ENST00000328159 Q9UF83 564 aa10.72□□□□□ -0.69
TPM3-205ENST00000328159 HHLA3Q9XRX5 114 aa10.72□□□□□ -0.69
TPM3-205ENST00000328159 CHTOPQ9Y3Y2 248 aaKnown RBP10.72□□□□□ -0.69
TPM3-205ENST00000328159 TRAV4A0A0B4J268 109 aa10.72□□□□□ -0.69
TPM3-205ENST00000328159 ZNF479Q96JC4 524 aa10.72□□□□□ -0.69
TPM3-205ENST00000328159 VWFP04275 2813 aa10.71□□□□□ -0.69
TPM3-205ENST00000328159 F8VRH5 84 aa10.71□□□□□ -0.69
TPM3-205ENST00000328159 PLNP26678 52 aa10.71□□□□□ -0.69
TPM3-205ENST00000328159 TCTAP57738 103 aa10.71□□□□□ -0.69
TPM3-205ENST00000328159 C20orf203Q8NBC4 194 aa10.71□□□□□ -0.69
TPM3-205ENST00000328159 TIMM17AQ99595 171 aa10.71□□□□□ -0.69
TPM3-205ENST00000328159 OVOL2Q9BRP0 275 aa10.71□□□□□ -0.69
TPM3-205ENST00000328159 PRSS29PA6NIE9 313 aa10.7□□□□□ -0.7
TPM3-205ENST00000328159 BAHCC1Q9P281 2608 aa10.7□□□□□ -0.7
TPM3-205ENST00000328159 CYSRT1A8MQ03 144 aa10.7□□□□□ -0.7
TPM3-205ENST00000328159 WIPF1O43516 503 aa10.69□□□□□ -0.7
TPM3-205ENST00000328159 FGF6P10767 208 aa10.69□□□□□ -0.7
TPM3-205ENST00000328159 GAGE12BA1L429 117 aa10.68□□□□□ -0.7
TPM3-205ENST00000328159 GAGE7O76087 117 aa10.68□□□□□ -0.7
TPM3-205ENST00000328159 GAGE12FP0CL80 117 aa10.68□□□□□ -0.7
TPM3-205ENST00000328159 GAGE12GP0CL81 117 aa10.68□□□□□ -0.7
TPM3-205ENST00000328159 GAGE12IP0CL82 117 aa10.68□□□□□ -0.7
TPM3-205ENST00000328159 ZC2HC1BQ5TFG8 222 aa10.68□□□□□ -0.7
TPM3-205ENST00000328159 NMUP48645 174 aa10.67□□□□□ -0.7
TPM3-205ENST00000328159 PMVKQ15126 192 aa10.67□□□□□ -0.7
TPM3-205ENST00000328159 BATFQ16520 125 aa10.67□□□□□ -0.7
TPM3-205ENST00000328159 BOD1L2Q8IYS8 172 aa10.67□□□□□ -0.7
TPM3-205ENST00000328159 TRGV2A0A075B6R0 118 aa10.67□□□□□ -0.7
TPM3-205ENST00000328159 K7EQD1 137 aa10.67□□□□□ -0.7
TPM3-205ENST00000328159 IGKV2D-26A0A0A0MRZ7 120 aa10.66□□□□□ -0.7
TPM3-205ENST00000328159 KIR2DL5BQ8NHK3 375 aa10.66□□□□□ -0.7
TPM3-205ENST00000328159 PHLDA1Q8WV24 401 aaPredicted RBP10.66□□□□□ -0.7
TPM3-205ENST00000328159 CST9LQ9H4G1 147 aa10.66□□□□□ -0.7
TPM3-205ENST00000328159 IGHV3-38A0A0C4DH36 116 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms