RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 Q6ZSA8 131 aa9.45□□□□□ -0.9
RPP40-201ENST00000319533 LINC01551Q86U37 167 aa9.45□□□□□ -0.9
RPP40-201ENST00000319533 ZFP82Q8N141 532 aa9.45□□□□□ -0.9
RPP40-201ENST00000319533 OCC1Q8TAD7 63 aa9.45□□□□□ -0.9
RPP40-201ENST00000319533 M0R381 172 aa9.44□□□□□ -0.9
RPP40-201ENST00000319533 RHODO00212 210 aa9.44□□□□□ -0.9
RPP40-201ENST00000319533 GHRHP01286 108 aa9.44□□□□□ -0.9
RPP40-201ENST00000319533 ADIRFQ15847 76 aa9.44□□□□□ -0.9
RPP40-201ENST00000319533 TMEM241Q24JQ0 296 aa9.44□□□□□ -0.9
RPP40-201ENST00000319533 OR10J3Q5JRS4 329 aa9.44□□□□□ -0.9
RPP40-201ENST00000319533 CLRN3Q8NCR9 226 aa9.44□□□□□ -0.9
RPP40-201ENST00000319533 GTSF1LQ9H1H1 148 aa9.44□□□□□ -0.9
RPP40-201ENST00000319533 Q9HAA7 133 aa9.44□□□□□ -0.9
RPP40-201ENST00000319533 CXCL1P09341 107 aa9.43□□□□□ -0.9
RPP40-201ENST00000319533 ISOC2Q96AB3 205 aa9.43□□□□□ -0.9
RPP40-201ENST00000319533 TM2D2Q9BX73 214 aa9.43□□□□□ -0.9
RPP40-201ENST00000319533 KRTAP29-1A8MX34 341 aaPredicted RBP9.42□□□□□ -0.9
RPP40-201ENST00000319533 SCO1O75880 301 aa9.42□□□□□ -0.9
RPP40-201ENST00000319533 IGHV3-30P01768 117 aa9.42□□□□□ -0.9
RPP40-201ENST00000319533 IGHV3-33P01772 117 aa9.42□□□□□ -0.9
RPP40-201ENST00000319533 IGHV3-30-3P0DP02 117 aa9.42□□□□□ -0.9
RPP40-201ENST00000319533 IGHV3-30-5P0DP03 117 aa9.42□□□□□ -0.9
RPP40-201ENST00000319533 RPL19P84098 196 aaKnown RBP9.42□□□□□ -0.9
RPP40-201ENST00000319533 WFDC2Q14508 124 aa9.42□□□□□ -0.9
RPP40-201ENST00000319533 FAM74A4Q5TZK3 123 aa9.42□□□□□ -0.9
RPP40-201ENST00000319533 SVBPQ8N300 66 aa9.42□□□□□ -0.9
RPP40-201ENST00000319533 ATP6V0E2Q8NHE4 81 aa9.42□□□□□ -0.9
RPP40-201ENST00000319533 DAZAP1Q96EP5 407 aaKnown RBP9.42□□□□□ -0.9
RPP40-201ENST00000319533 SMIM12Q96EX1 92 aa9.42□□□□□ -0.9
RPP40-201ENST00000319533 JPT2Q9H910 190 aa9.42□□□□□ -0.9
RPP40-201ENST00000319533 PLA2G1BP04054 148 aaKnown RBP9.41□□□□□ -0.9
RPP40-201ENST00000319533 LINC00694P0DN24 101 aa9.41□□□□□ -0.9
RPP40-201ENST00000319533 SFRP2Q96HF1 295 aa9.41□□□□□ -0.9
RPP40-201ENST00000319533 SAMD10Q9BYL1 202 aa9.41□□□□□ -0.9
RPP40-201ENST00000319533 BIN3Q9NQY0 253 aa9.41□□□□□ -0.9
RPP40-201ENST00000319533 LRP1Q07954 4544 aaKnown RBP9.41□□□□□ -0.9
RPP40-201ENST00000319533 C7orf77A4D0Y5 90 aa9.4□□□□□ -0.9
RPP40-201ENST00000319533 PNRC1Q12796 327 aaPredicted RBP9.4□□□□□ -0.9
RPP40-201ENST00000319533 UFSP1Q6NVU6 142 aa9.4□□□□□ -0.9
RPP40-201ENST00000319533 HMCN2Q8NDA2 5059 aa9.4□□□□□ -0.9
RPP40-201ENST00000319533 A0A087WWL8 130 aa9.39□□□□□ -0.91
RPP40-201ENST00000319533 TRAV8-3A0A0A6YYJ7 113 aa9.39□□□□□ -0.91
RPP40-201ENST00000319533 GAGE12JA6NER3 117 aa9.39□□□□□ -0.91
RPP40-201ENST00000319533 SNAPINO95295 136 aa9.39□□□□□ -0.91
RPP40-201ENST00000319533 GAGE1Q13065 139 aa9.39□□□□□ -0.91
RPP40-201ENST00000319533 GAGE4Q13068 117 aa9.39□□□□□ -0.91
RPP40-201ENST00000319533 GAGE5Q13069 117 aa9.39□□□□□ -0.91
RPP40-201ENST00000319533 GAGE13Q4V321 117 aa9.39□□□□□ -0.91
RPP40-201ENST00000319533 SPANXN1Q5VSR9 72 aa9.39□□□□□ -0.91
RPP40-201ENST00000319533 RNASE7Q9H1E1 156 aaKnown RBP9.39□□□□□ -0.91
RPP40-201ENST00000319533 FAT3Q8TDW7 4589 aa9.39□□□□□ -0.91
RPP40-201ENST00000319533 C19orf71A6NCJ1 209 aa9.38□□□□□ -0.91
RPP40-201ENST00000319533 SNAI2O43623 268 aa9.38□□□□□ -0.91
RPP40-201ENST00000319533 OR5AL1P0C617 328 aa9.38□□□□□ -0.91
RPP40-201ENST00000319533 RPS20P60866 119 aaKnown RBP9.38□□□□□ -0.91
RPP40-201ENST00000319533 RHEBQ15382 184 aa9.38□□□□□ -0.91
RPP40-201ENST00000319533 Q8N3U1 123 aa9.38□□□□□ -0.91
RPP40-201ENST00000319533 C14orf178Q8N769 122 aaPredicted RBP9.38□□□□□ -0.91
RPP40-201ENST00000319533 OR2D3Q8NGH3 330 aa9.38□□□□□ -0.91
RPP40-201ENST00000319533 OR10AG1Q8NH19 301 aa9.38□□□□□ -0.91
RPP40-201ENST00000319533 XKRY2A2RUG3 117 aa9.37□□□□□ -0.91
RPP40-201ENST00000319533 P01737 135 aa9.37□□□□□ -0.91
RPP40-201ENST00000319533 DEFB104AQ8WTQ1 72 aa9.37□□□□□ -0.91
RPP40-201ENST00000319533 SSBP4Q9BWG4 385 aaPredicted RBP9.37□□□□□ -0.91
RPP40-201ENST00000319533 RPS10P5Q9NQ39 176 aa9.37□□□□□ -0.91
RPP40-201ENST00000319533 TRBV10-1A0A0K0K1A3 114 aa9.36□□□□□ -0.91
RPP40-201ENST00000319533 FAM231DQ6ZW35 169 aa9.36□□□□□ -0.91
RPP40-201ENST00000319533 DAZ4Q86SG3 579 aaKnown RBP9.36□□□□□ -0.91
RPP40-201ENST00000319533 CBLN2Q8IUK8 224 aa9.36□□□□□ -0.91
RPP40-201ENST00000319533 NUDT10Q8NFP7 164 aa9.36□□□□□ -0.91
RPP40-201ENST00000319533 NUDT11Q96G61 164 aa9.36□□□□□ -0.91
RPP40-201ENST00000319533 TPPP3Q9BW30 176 aa9.36□□□□□ -0.91
RPP40-201ENST00000319533 DAZ3Q9NR90 486 aaKnown RBP9.36□□□□□ -0.91
RPP40-201ENST00000319533 OSTCQ9NRP0 149 aa9.36□□□□□ -0.91
RPP40-201ENST00000319533 COX11Q9Y6N1 276 aa9.36□□□□□ -0.91
RPP40-201ENST00000319533 V9GYV3 84 aa9.36□□□□□ -0.91
RPP40-201ENST00000319533 A0A087WWC5 75 aa9.35□□□□□ -0.91
RPP40-201ENST00000319533 MUC21A0A0G2JKD1 596 aa9.35□□□□□ -0.91
RPP40-201ENST00000319533 MUC21A0A140T8X8 626 aa9.35□□□□□ -0.91
RPP40-201ENST00000319533 SMIM17P0DL12 118 aa9.35□□□□□ -0.91
RPP40-201ENST00000319533 SSTP61278 116 aa9.35□□□□□ -0.91
RPP40-201ENST00000319533 ZNF56Q15929 161 aa9.35□□□□□ -0.91
RPP40-201ENST00000319533 FER1L6-AS1Q8NA97 138 aa9.35□□□□□ -0.91
RPP40-201ENST00000319533 OR10G8Q8NGN5 311 aa9.35□□□□□ -0.91
RPP40-201ENST00000319533 AP1S3Q96PC3 154 aa9.35□□□□□ -0.91
RPP40-201ENST00000319533 LECT2O14960 151 aa9.34□□□□□ -0.91
RPP40-201ENST00000319533 GZMBP10144 247 aa9.34□□□□□ -0.91
RPP40-201ENST00000319533 KRTAP10-4P60372 401 aaPredicted RBP9.34□□□□□ -0.91
RPP40-201ENST00000319533 RAB4BP61018 213 aa9.34□□□□□ -0.91
RPP40-201ENST00000319533 RPL36AP83881 106 aaKnown RBP9.34□□□□□ -0.91
RPP40-201ENST00000319533 RPL36ALQ969Q0 106 aaKnown RBP9.34□□□□□ -0.91
RPP40-201ENST00000319533 Q9UF83 564 aa9.34□□□□□ -0.91
RPP40-201ENST00000319533 PKHD1L1Q86WI1 4243 aa9.33□□□□□ -0.92
RPP40-201ENST00000319533 F2Z2F3 143 aa9.33□□□□□ -0.92
RPP40-201ENST00000319533 F5H697 171 aa9.33□□□□□ -0.92
RPP40-201ENST00000319533 GATCO43716 136 aaKnown RBP9.33□□□□□ -0.92
RPP40-201ENST00000319533 MT-ND4LP03901 98 aa9.33□□□□□ -0.92
RPP40-201ENST00000319533 IGLC6P0CF74 106 aa9.33□□□□□ -0.92
RPP40-201ENST00000319533 CACNG7P62955 275 aa9.33□□□□□ -0.92
RPP40-201ENST00000319533 SCXQ7RTU7 201 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms