RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 IGKV2-40A0A087WW87 121 aaPredicted RBP3.65□□□□□ -1.83
CKS1B-201ENST00000308987 TMSB15BA0A087X1C1 80 aa3.65□□□□□ -1.83
CKS1B-201ENST00000308987 TRBV7-1A0A0A6YYK4 115 aa3.65□□□□□ -1.83
CKS1B-201ENST00000308987 IGHV7-81A0A0B4J1V7 117 aa3.65□□□□□ -1.83
CKS1B-201ENST00000308987 TRBV7-9A0A0J9YWB2 115 aa3.65□□□□□ -1.83
CKS1B-201ENST00000308987 A6NDX4 124 aa3.65□□□□□ -1.83
CKS1B-201ENST00000308987 SNAI2O43623 268 aa3.65□□□□□ -1.83
CKS1B-201ENST00000308987 BRI3O95415 125 aa3.65□□□□□ -1.83
CKS1B-201ENST00000308987 PPP1R17O96001 155 aa3.65□□□□□ -1.83
CKS1B-201ENST00000308987 IGKV2D-40P01614 121 aaPredicted RBP3.65□□□□□ -1.83
CKS1B-201ENST00000308987 IGKCP01834 107 aa3.65□□□□□ -1.83
CKS1B-201ENST00000308987 ORM1P02763 201 aa3.65□□□□□ -1.83
CKS1B-201ENST00000308987 FABP2P12104 132 aa3.65□□□□□ -1.83
CKS1B-201ENST00000308987 TMEM11P17152 192 aa3.65□□□□□ -1.83
CKS1B-201ENST00000308987 PLNP26678 52 aa3.65□□□□□ -1.83
CKS1B-201ENST00000308987 HOXD3P31249 432 aaPredicted RBP3.65□□□□□ -1.83
CKS1B-201ENST00000308987 LEPP41159 167 aa3.65□□□□□ -1.83
CKS1B-201ENST00000308987 ZNF80P51504 273 aaPredicted RBP3.65□□□□□ -1.83
CKS1B-201ENST00000308987 CRIP2P52943 208 aaPredicted RBP3.65□□□□□ -1.83
CKS1B-201ENST00000308987 KRTAP10-5P60370 271 aa3.65□□□□□ -1.83
CKS1B-201ENST00000308987 EGFEM1PQ0D2K5 195 aa3.65□□□□□ -1.83
CKS1B-201ENST00000308987 HES1Q14469 280 aa3.65□□□□□ -1.83
CKS1B-201ENST00000308987 TMEM78Q5T7P6 136 aa3.65□□□□□ -1.83
CKS1B-201ENST00000308987 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.65□□□□□ -1.83
CKS1B-201ENST00000308987 C9orf47Q6ZRZ4 202 aa3.65□□□□□ -1.83
CKS1B-201ENST00000308987 MYOZ3Q8TDC0 251 aa3.65□□□□□ -1.83
CKS1B-201ENST00000308987 VGLL1Q99990 258 aa3.65□□□□□ -1.83
CKS1B-201ENST00000308987 CSTL1Q9H114 145 aa3.65□□□□□ -1.83
CKS1B-201ENST00000308987 HILPDAQ9Y5L2 63 aa3.65□□□□□ -1.83
CKS1B-201ENST00000308987 DNAH6Q9C0G6 4158 aa3.64□□□□□ -1.83
CKS1B-201ENST00000308987 A0A087WX48 190 aa3.64□□□□□ -1.83
CKS1B-201ENST00000308987 PRSS29PA6NIE9 313 aa3.64□□□□□ -1.83
CKS1B-201ENST00000308987 NCBP2LA6PVI3 153 aaKnown RBP3.64□□□□□ -1.83
CKS1B-201ENST00000308987 H3BUT2 72 aa3.64□□□□□ -1.83
CKS1B-201ENST00000308987 M0R381 172 aa3.64□□□□□ -1.83
CKS1B-201ENST00000308987 PRSS1P07477 247 aa3.64□□□□□ -1.83
CKS1B-201ENST00000308987 SCGB1A1P11684 91 aa3.64□□□□□ -1.83
CKS1B-201ENST00000308987 NMUP48645 174 aa3.64□□□□□ -1.83
CKS1B-201ENST00000308987 RPL32P62910 135 aaKnown RBP3.64□□□□□ -1.83
CKS1B-201ENST00000308987 NDPQ00604 133 aa3.64□□□□□ -1.83
CKS1B-201ENST00000308987 LAGE3Q14657 143 aa3.64□□□□□ -1.83
CKS1B-201ENST00000308987 ORMDL2Q53FV1 153 aa3.64□□□□□ -1.83
CKS1B-201ENST00000308987 C10orf25Q5T742 122 aa3.64□□□□□ -1.83
CKS1B-201ENST00000308987 C18orf65Q6ZTR6 163 aa3.64□□□□□ -1.83
CKS1B-201ENST00000308987 ERASQ7Z444 233 aa3.64□□□□□ -1.83
CKS1B-201ENST00000308987 PCP2Q8IVA1 136 aa3.64□□□□□ -1.83
CKS1B-201ENST00000308987 Q8N9W7 124 aa3.64□□□□□ -1.83
CKS1B-201ENST00000308987 EEF1AKMT3Q96AZ1 226 aa3.64□□□□□ -1.83
CKS1B-201ENST00000308987 B9D2Q9BPU9 175 aa3.64□□□□□ -1.83
CKS1B-201ENST00000308987 C20orf78Q9BR46 151 aa3.64□□□□□ -1.83
CKS1B-201ENST00000308987 MCRIP2Q9BUT9 160 aaKnown RBP3.64□□□□□ -1.83
CKS1B-201ENST00000308987 MDFICQ9P1T7 246 aa3.64□□□□□ -1.83
CKS1B-201ENST00000308987 TP73-AS1Q9UF72 201 aa3.64□□□□□ -1.83
CKS1B-201ENST00000308987 TIMM8BQ9Y5J9 83 aaPredicted RBP3.64□□□□□ -1.83
CKS1B-201ENST00000308987 SPCS1Q9Y6A9 102 aa3.64□□□□□ -1.83
CKS1B-201ENST00000308987 DNAH2Q9P225 4427 aa3.64□□□□□ -1.83
CKS1B-201ENST00000308987 TRBV25-1A0A075B6N4 114 aa3.63□□□□□ -1.83
CKS1B-201ENST00000308987 IGKV3D-20A0A0C4DH25 116 aa3.63□□□□□ -1.83
CKS1B-201ENST00000308987 A0A1B0GWB2 263 aa3.63□□□□□ -1.83
CKS1B-201ENST00000308987 FAM223BA6NKX1 122 aa3.63□□□□□ -1.83
CKS1B-201ENST00000308987 E9PLD3 99 aa3.63□□□□□ -1.83
CKS1B-201ENST00000308987 F8W1H4 67 aa3.63□□□□□ -1.83
CKS1B-201ENST00000308987 SMKR1H3BMG3 65 aa3.63□□□□□ -1.83
CKS1B-201ENST00000308987 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.63□□□□□ -1.83
CKS1B-201ENST00000308987 H7C1H1 209 aa3.63□□□□□ -1.83
CKS1B-201ENST00000308987 J3QR89 54 aa3.63□□□□□ -1.83
CKS1B-201ENST00000308987 PPIFP30405 207 aaKnown RBP3.63□□□□□ -1.83
CKS1B-201ENST00000308987 DEFB121Q5J5C9 76 aa3.63□□□□□ -1.83
CKS1B-201ENST00000308987 FAM223AQ8IWN6 122 aa3.63□□□□□ -1.83
CKS1B-201ENST00000308987 CEND1Q8N111 149 aa3.63□□□□□ -1.83
CKS1B-201ENST00000308987 PHLDA1Q8WV24 401 aaPredicted RBP3.63□□□□□ -1.83
CKS1B-201ENST00000308987 LINC00477Q96M19 166 aa3.63□□□□□ -1.83
CKS1B-201ENST00000308987 METTL26Q96S19 204 aa3.63□□□□□ -1.83
CKS1B-201ENST00000308987 CHAC1Q9BUX1 264 aa3.63□□□□□ -1.83
CKS1B-201ENST00000308987 AGPAT4-IT1Q9H0P7 198 aa3.63□□□□□ -1.83
CKS1B-201ENST00000308987 MSRB1Q9NZV6 116 aa3.63□□□□□ -1.83
CKS1B-201ENST00000308987 DNAH17Q9UFH2 4485 aa3.63□□□□□ -1.83
CKS1B-201ENST00000308987 DYNC1H1Q14204 4646 aaKnown RBP3.63□□□□□ -1.83
CKS1B-201ENST00000308987 TRAV8-2A0A0B4J237 113 aa3.62□□□□□ -1.83
CKS1B-201ENST00000308987 IGHV7-4-1A0A0J9YVY3 117 aa3.62□□□□□ -1.83
CKS1B-201ENST00000308987 PRAC2D3DTV9 90 aa3.62□□□□□ -1.83
CKS1B-201ENST00000308987 F8VRH5 84 aa3.62□□□□□ -1.83
CKS1B-201ENST00000308987 H3BUA1 57 aa3.62□□□□□ -1.83
CKS1B-201ENST00000308987 OVOL1O14753 267 aa3.62□□□□□ -1.83
CKS1B-201ENST00000308987 CLEC3BP05452 202 aa3.62□□□□□ -1.83
CKS1B-201ENST00000308987 NANOS2P60321 138 aaKnown RBP3.62□□□□□ -1.83
CKS1B-201ENST00000308987 C15orf32Q32M92 178 aa3.62□□□□□ -1.83
CKS1B-201ENST00000308987 PAPPA-AS1Q5QFB9 102 aa3.62□□□□□ -1.83
CKS1B-201ENST00000308987 ZC2HC1BQ5TFG8 222 aa3.62□□□□□ -1.83
CKS1B-201ENST00000308987 SAMD13Q5VXD3 122 aa3.62□□□□□ -1.83
CKS1B-201ENST00000308987 FOXI2Q6ZQN5 318 aa3.62□□□□□ -1.83
CKS1B-201ENST00000308987 APRG1Q8IVJ8 170 aa3.62□□□□□ -1.83
CKS1B-201ENST00000308987 POM121L12Q8N7R1 296 aa3.62□□□□□ -1.83
CKS1B-201ENST00000308987 Q8TAT8 98 aa3.62□□□□□ -1.83
CKS1B-201ENST00000308987 TOMM6Q96B49 74 aa3.62□□□□□ -1.83
CKS1B-201ENST00000308987 SMIM2Q9BVW6 85 aa3.62□□□□□ -1.83
CKS1B-201ENST00000308987 FAT2Q9NYQ8 4349 aa3.62□□□□□ -1.83
CKS1B-201ENST00000308987 IGHV4OR15-8A0A075B7B6 117 aa3.61□□□□□ -1.83
CKS1B-201ENST00000308987 A0A087WW49 117 aa3.61□□□□□ -1.83
CKS1B-201ENST00000308987 IGKV2D-26A0A0A0MRZ7 120 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 164.2 ms