RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 GAGE12JA6NER3 117 aa18.88■□□□□ 0.61
HDAC3-201ENST00000305264 NUDT3O95989 172 aa18.88■□□□□ 0.61
HDAC3-201ENST00000305264 RPS10P46783 165 aaKnown RBP18.88■□□□□ 0.61
HDAC3-201ENST00000305264 GAGE1Q13065 139 aa18.88■□□□□ 0.61
HDAC3-201ENST00000305264 GAGE4Q13068 117 aa18.88■□□□□ 0.61
HDAC3-201ENST00000305264 GAGE5Q13069 117 aa18.88■□□□□ 0.61
HDAC3-201ENST00000305264 GAGE13Q4V321 117 aa18.88■□□□□ 0.61
HDAC3-201ENST00000305264 COLCA2A8K830 154 aa18.88■□□□□ 0.61
HDAC3-201ENST00000305264 ICOSQ9Y6W8 199 aa18.88■□□□□ 0.61
HDAC3-201ENST00000305264 A0A096LPF7 62 aa18.87■□□□□ 0.61
HDAC3-201ENST00000305264 D6R8Y8 96 aa18.87■□□□□ 0.61
HDAC3-201ENST00000305264 FRZBQ92765 325 aa18.87■□□□□ 0.61
HDAC3-201ENST00000305264 LINC00694P0DN24 101 aa18.86■□□□□ 0.61
HDAC3-201ENST00000305264 APCSP02743 223 aa18.86■□□□□ 0.61
HDAC3-201ENST00000305264 MT-ND6P03923 174 aa18.86■□□□□ 0.61
HDAC3-201ENST00000305264 CKS2P33552 79 aa18.86■□□□□ 0.61
HDAC3-201ENST00000305264 CASC10Q5T4H9 136 aa18.86■□□□□ 0.61
HDAC3-201ENST00000305264 C15orf53Q8NAA6 179 aa18.86■□□□□ 0.61
HDAC3-201ENST00000305264 ZNRF2Q8NHG8 242 aa18.86■□□□□ 0.61
HDAC3-201ENST00000305264 MRPL18Q9H0U6 180 aaKnown RBP18.86■□□□□ 0.61
HDAC3-201ENST00000305264 NIT2Q9NQR4 276 aa18.85■□□□□ 0.61
HDAC3-201ENST00000305264 C3orf84H3BNL1 204 aa18.84■□□□□ 0.61
HDAC3-201ENST00000305264 KIAA1644Q3SXP7 199 aa18.84■□□□□ 0.61
HDAC3-201ENST00000305264 APLNQ9ULZ1 77 aa18.84■□□□□ 0.61
HDAC3-201ENST00000305264 TRBV7-3A0A075B6L6 115 aa18.84■□□□□ 0.61
HDAC3-201ENST00000305264 SRIP30626 198 aa18.84■□□□□ 0.61
HDAC3-201ENST00000305264 RPL36AP83881 106 aaKnown RBP18.84■□□□□ 0.61
HDAC3-201ENST00000305264 MRPL23Q16540 153 aaKnown RBP18.84■□□□□ 0.61
HDAC3-201ENST00000305264 NRACQ8N912 160 aa18.84■□□□□ 0.61
HDAC3-201ENST00000305264 RPL36ALQ969Q0 106 aaKnown RBP18.84■□□□□ 0.61
HDAC3-201ENST00000305264 LYSTQ99698 3801 aa18.84■□□□□ 0.61
HDAC3-201ENST00000305264 OR10J3Q5JRS4 329 aa18.83■□□□□ 0.61
HDAC3-201ENST00000305264 TRAPPC1Q9Y5R8 145 aa18.83■□□□□ 0.61
HDAC3-201ENST00000305264 ORMDL3Q8N138 153 aa18.82■□□□□ 0.6
HDAC3-201ENST00000305264 TNFRSF18Q9Y5U5 241 aa18.82■□□□□ 0.6
HDAC3-201ENST00000305264 UBE2D3P61077 147 aa18.81■□□□□ 0.6
HDAC3-201ENST00000305264 UBE2D2P62837 147 aa18.81■□□□□ 0.6
HDAC3-201ENST00000305264 FABP9Q0Z7S8 132 aa18.81■□□□□ 0.6
HDAC3-201ENST00000305264 DNAJC30Q96LL9 226 aa18.81■□□□□ 0.6
HDAC3-201ENST00000305264 PPBPP02775 128 aa18.81■□□□□ 0.6
HDAC3-201ENST00000305264 NPYP01303 97 aa18.8■□□□□ 0.6
HDAC3-201ENST00000305264 RAB5AP20339 215 aa18.8■□□□□ 0.6
HDAC3-201ENST00000305264 PRELID3AQ96N28 172 aa18.79■□□□□ 0.6
HDAC3-201ENST00000305264 NEGR1Q7Z3B1 354 aa18.79■□□□□ 0.6
HDAC3-201ENST00000305264 TRBV6-5A0A0K0K1A5 114 aa18.78■□□□□ 0.6
HDAC3-201ENST00000305264 TNFRSF6BO95407 300 aa18.78■□□□□ 0.6
HDAC3-201ENST00000305264 IGHV3-38A0A0C4DH36 116 aa18.77■□□□□ 0.6
HDAC3-201ENST00000305264 ATP6V0E2Q8NHE4 81 aa18.77■□□□□ 0.6
HDAC3-201ENST00000305264 TCTAP57738 103 aa18.77■□□□□ 0.59
HDAC3-201ENST00000305264 SDHAF1A6NFY7 115 aa18.76■□□□□ 0.59
HDAC3-201ENST00000305264 PPP1R17O96001 155 aa18.76■□□□□ 0.59
HDAC3-201ENST00000305264 ST20Q9HBF5 79 aa18.76■□□□□ 0.59
HDAC3-201ENST00000305264 SUMO2P61956 95 aaKnown RBP18.75■□□□□ 0.59
HDAC3-201ENST00000305264 SH2D6Q7Z4S9 175 aa18.75■□□□□ 0.59
HDAC3-201ENST00000305264 TMEM70Q9BUB7 260 aa18.74■□□□□ 0.59
HDAC3-201ENST00000305264 DEFB104AQ8WTQ1 72 aa18.73■□□□□ 0.59
HDAC3-201ENST00000305264 ALKBH7Q9BT30 221 aaPredicted RBP18.73■□□□□ 0.59
HDAC3-201ENST00000305264 PHOX2AO14813 284 aa18.73■□□□□ 0.59
HDAC3-201ENST00000305264 TRGC2P03986 189 aa18.73■□□□□ 0.59
HDAC3-201ENST00000305264 ESRGQ1W209 222 aa18.73■□□□□ 0.59
HDAC3-201ENST00000305264 LAMTOR2Q9Y2Q5 125 aa18.73■□□□□ 0.59
HDAC3-201ENST00000305264 LYPD5Q6UWN5 251 aa18.72■□□□□ 0.59
HDAC3-201ENST00000305264 DAZ4Q86SG3 579 aaKnown RBP18.72■□□□□ 0.59
HDAC3-201ENST00000305264 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.72■□□□□ 0.59
HDAC3-201ENST00000305264 GTSF1LQ9H1H1 148 aa18.72■□□□□ 0.59
HDAC3-201ENST00000305264 DAZ3Q9NR90 486 aaKnown RBP18.72■□□□□ 0.59
HDAC3-201ENST00000305264 POLR2KP53803 58 aaKnown RBP18.72■□□□□ 0.59
HDAC3-201ENST00000305264 C20orf78Q9BR46 151 aa18.72■□□□□ 0.59
HDAC3-201ENST00000305264 TRBV27A0A0K0K1C4 114 aa18.68■□□□□ 0.58
HDAC3-201ENST00000305264 SMIM2Q9BVW6 85 aa18.68■□□□□ 0.58
HDAC3-201ENST00000305264 MAP1LC3AQ9H492 121 aa18.68■□□□□ 0.58
HDAC3-201ENST00000305264 LINC00588Q9Y4M8 146 aa18.68■□□□□ 0.58
HDAC3-201ENST00000305264 LOC389332A0A1B0GUA5 103 aa18.67■□□□□ 0.58
HDAC3-201ENST00000305264 I3L3M4 83 aa18.66■□□□□ 0.58
HDAC3-201ENST00000305264 NTM-AS1Q6ZSK4 140 aa18.66■□□□□ 0.58
HDAC3-201ENST00000305264 PMCHP20382 165 aa18.66■□□□□ 0.58
HDAC3-201ENST00000305264 CCL18P55774 89 aa18.66■□□□□ 0.58
HDAC3-201ENST00000305264 TIRAPP58753 221 aa18.66■□□□□ 0.58
HDAC3-201ENST00000305264 RPL32P62910 135 aaKnown RBP18.66■□□□□ 0.58
HDAC3-201ENST00000305264 VCYO14598 125 aa18.65■□□□□ 0.58
HDAC3-201ENST00000305264 COTL1Q14019 142 aa18.64■□□□□ 0.58
HDAC3-201ENST00000305264 PRSS47A8MTI9 375 aa18.64■□□□□ 0.57
HDAC3-201ENST00000305264 TSHBP01222 138 aa18.64■□□□□ 0.57
HDAC3-201ENST00000305264 IQCJQ1A5X6 159 aa18.64■□□□□ 0.57
HDAC3-201ENST00000305264 VPS13DQ5THJ4 4388 aa18.64■□□□□ 0.57
HDAC3-201ENST00000305264 IGLV2-18A0A075B6J9 118 aa18.63■□□□□ 0.57
HDAC3-201ENST00000305264 TRBV6-8A0A0A6YYG3 113 aa18.63■□□□□ 0.57
HDAC3-201ENST00000305264 LELP1Q5T871 98 aa18.62■□□□□ 0.57
HDAC3-201ENST00000305264 C18orf32Q8TCD1 76 aa18.62■□□□□ 0.57
HDAC3-201ENST00000305264 UBE2DNLQ8IWF7 75 aa18.62■□□□□ 0.57
HDAC3-201ENST00000305264 ALMS1Q8TCU4 4167 aa18.62■□□□□ 0.57
HDAC3-201ENST00000305264 DNAH1Q9P2D7 4330 aa18.62■□□□□ 0.57
HDAC3-201ENST00000305264 IFI27P40305 119 aaPredicted RBP18.61■□□□□ 0.57
HDAC3-201ENST00000305264 MRPS16Q9Y3D3 137 aaKnown RBP18.61■□□□□ 0.57
HDAC3-201ENST00000305264 KIR2DL4Q99706 377 aa18.61■□□□□ 0.57
HDAC3-201ENST00000305264 TMEM97Q5BJF2 176 aa18.6■□□□□ 0.57
HDAC3-201ENST00000305264 TCAPO15273 167 aa18.59■□□□□ 0.57
HDAC3-201ENST00000305264 Q8N8P6 123 aa18.59■□□□□ 0.57
HDAC3-201ENST00000305264 TRBV25-1A0A075B6N4 114 aa18.58■□□□□ 0.56
HDAC3-201ENST00000305264 FCER1GP30273 86 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms