RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 A0A096LPF7 62 aa6.58□□□□□ -1.36
RFX3-201ENST00000302303 K7EQD1 137 aa6.58□□□□□ -1.36
RFX3-201ENST00000302303 PAX4O43316 350 aa6.58□□□□□ -1.36
RFX3-201ENST00000302303 SMIM17P0DL12 118 aa6.58□□□□□ -1.36
RFX3-201ENST00000302303 ZFAND6Q6FIF0 208 aa6.58□□□□□ -1.36
RFX3-201ENST00000302303 RPL39LQ96EH5 51 aaKnown RBP6.58□□□□□ -1.36
RFX3-201ENST00000302303 IGLL5B9A064 214 aa6.57□□□□□ -1.36
RFX3-201ENST00000302303 F5H697 171 aa6.57□□□□□ -1.36
RFX3-201ENST00000302303 NCR2O95944 276 aa6.57□□□□□ -1.36
RFX3-201ENST00000302303 S100A8P05109 93 aa6.57□□□□□ -1.36
RFX3-201ENST00000302303 SMIM15Q7Z3B0 74 aa6.57□□□□□ -1.36
RFX3-201ENST00000302303 FRZBQ92765 325 aa6.57□□□□□ -1.36
RFX3-201ENST00000302303 TRBV10-1A0A0K0K1A3 114 aa6.56□□□□□ -1.36
RFX3-201ENST00000302303 TRBV6-5A0A0K0K1A5 114 aa6.56□□□□□ -1.36
RFX3-201ENST00000302303 GHRHP01286 108 aa6.56□□□□□ -1.36
RFX3-201ENST00000302303 GYPEP15421 78 aa6.56□□□□□ -1.36
RFX3-201ENST00000302303 RHOHQ15669 191 aa6.56□□□□□ -1.36
RFX3-201ENST00000302303 KIAA1644Q3SXP7 199 aa6.56□□□□□ -1.36
RFX3-201ENST00000302303 CASC10Q5T4H9 136 aa6.56□□□□□ -1.36
RFX3-201ENST00000302303 MRAP2Q96G30 205 aa6.56□□□□□ -1.36
RFX3-201ENST00000302303 NIT2Q9NQR4 276 aa6.56□□□□□ -1.36
RFX3-201ENST00000302303 LYSTQ99698 3801 aa6.56□□□□□ -1.36
RFX3-201ENST00000302303 GAGE12JA6NER3 117 aa6.55□□□□□ -1.36
RFX3-201ENST00000302303 NUPR2A6NF83 97 aa6.55□□□□□ -1.36
RFX3-201ENST00000302303 D6R8Y8 96 aa6.55□□□□□ -1.36
RFX3-201ENST00000302303 NPYP01303 97 aa6.55□□□□□ -1.36
RFX3-201ENST00000302303 HLA-DQA1P01909 254 aa6.55□□□□□ -1.36
RFX3-201ENST00000302303 POLR2KP53803 58 aaKnown RBP6.55□□□□□ -1.36
RFX3-201ENST00000302303 UBE2D3P61077 147 aa6.55□□□□□ -1.36
RFX3-201ENST00000302303 UBE2D2P62837 147 aa6.55□□□□□ -1.36
RFX3-201ENST00000302303 GAGE1Q13065 139 aa6.55□□□□□ -1.36
RFX3-201ENST00000302303 GAGE4Q13068 117 aa6.55□□□□□ -1.36
RFX3-201ENST00000302303 GAGE5Q13069 117 aa6.55□□□□□ -1.36
RFX3-201ENST00000302303 GAGE13Q4V321 117 aa6.55□□□□□ -1.36
RFX3-201ENST00000302303 ZNRF2Q8NHG8 242 aa6.55□□□□□ -1.36
RFX3-201ENST00000302303 MRPL18Q9H0U6 180 aaKnown RBP6.55□□□□□ -1.36
RFX3-201ENST00000302303 TRBV7-3A0A075B6L6 115 aa6.55□□□□□ -1.36
RFX3-201ENST00000302303 APCSP02743 223 aa6.55□□□□□ -1.36
RFX3-201ENST00000302303 RAB5AP20339 215 aa6.55□□□□□ -1.36
RFX3-201ENST00000302303 FABP9Q0Z7S8 132 aa6.55□□□□□ -1.36
RFX3-201ENST00000302303 COX19Q49B96 90 aa6.55□□□□□ -1.36
RFX3-201ENST00000302303 PRADC1Q9BSG0 188 aa6.55□□□□□ -1.36
RFX3-201ENST00000302303 ALKBH7Q9BT30 221 aaPredicted RBP6.55□□□□□ -1.36
RFX3-201ENST00000302303 IGLV2-18A0A075B6J9 118 aa6.54□□□□□ -1.36
RFX3-201ENST00000302303 PRSS47A8MTI9 375 aa6.54□□□□□ -1.36
RFX3-201ENST00000302303 TNFRSF6BO95407 300 aa6.54□□□□□ -1.36
RFX3-201ENST00000302303 MT-ND6P03923 174 aa6.54□□□□□ -1.36
RFX3-201ENST00000302303 CKS2P33552 79 aa6.54□□□□□ -1.36
RFX3-201ENST00000302303 MRPL23Q16540 153 aaKnown RBP6.54□□□□□ -1.36
RFX3-201ENST00000302303 ESRGQ1W209 222 aa6.54□□□□□ -1.36
RFX3-201ENST00000302303 NTM-AS1Q6ZSK4 140 aa6.54□□□□□ -1.36
RFX3-201ENST00000302303 DNAJC30Q96LL9 226 aa6.54□□□□□ -1.36
RFX3-201ENST00000302303 TRAPPC1Q9Y5R8 145 aa6.54□□□□□ -1.36
RFX3-201ENST00000302303 C3orf84H3BNL1 204 aa6.53□□□□□ -1.36
RFX3-201ENST00000302303 H7C1H1 209 aa6.53□□□□□ -1.36
RFX3-201ENST00000302303 NUDT3O95989 172 aa6.53□□□□□ -1.36
RFX3-201ENST00000302303 PPBPP02775 128 aa6.53□□□□□ -1.36
RFX3-201ENST00000302303 TRGC2P03986 189 aa6.53□□□□□ -1.36
RFX3-201ENST00000302303 LYPD5Q6UWN5 251 aa6.53□□□□□ -1.36
RFX3-201ENST00000302303 ORMDL3Q8N138 153 aa6.53□□□□□ -1.36
RFX3-201ENST00000302303 C15orf53Q8NAA6 179 aa6.53□□□□□ -1.36
RFX3-201ENST00000302303 DEFB104AQ8WTQ1 72 aa6.53□□□□□ -1.36
RFX3-201ENST00000302303 PRELID3AQ96N28 172 aa6.53□□□□□ -1.36
RFX3-201ENST00000302303 TMEM70Q9BUB7 260 aa6.53□□□□□ -1.36
RFX3-201ENST00000302303 ICOSQ9Y6W8 199 aa6.53□□□□□ -1.36
RFX3-201ENST00000302303 IGHV3-38A0A0C4DH36 116 aa6.52□□□□□ -1.37
RFX3-201ENST00000302303 TRBV27A0A0K0K1C4 114 aa6.52□□□□□ -1.37
RFX3-201ENST00000302303 SDHAF1A6NFY7 115 aa6.52□□□□□ -1.37
RFX3-201ENST00000302303 RPL36AP83881 106 aaKnown RBP6.52□□□□□ -1.37
RFX3-201ENST00000302303 OR10J3Q5JRS4 329 aa6.52□□□□□ -1.37
RFX3-201ENST00000302303 NEGR1Q7Z3B1 354 aa6.52□□□□□ -1.37
RFX3-201ENST00000302303 ATP6V0E2Q8NHE4 81 aa6.52□□□□□ -1.37
RFX3-201ENST00000302303 RPL36ALQ969Q0 106 aaKnown RBP6.52□□□□□ -1.37
RFX3-201ENST00000302303 KLK5Q9Y337 293 aaPredicted RBP6.52□□□□□ -1.37
RFX3-201ENST00000302303 SACSQ9NZJ4 4579 aa6.52□□□□□ -1.37
RFX3-201ENST00000302303 TCTAP57738 103 aa6.51□□□□□ -1.37
RFX3-201ENST00000302303 SUMO2P61956 95 aaKnown RBP6.51□□□□□ -1.37
RFX3-201ENST00000302303 RPL32P62910 135 aaKnown RBP6.51□□□□□ -1.37
RFX3-201ENST00000302303 URB1-AS1Q96HZ7 61 aa6.51□□□□□ -1.37
RFX3-201ENST00000302303 C20orf78Q9BR46 151 aa6.51□□□□□ -1.37
RFX3-201ENST00000302303 LINC00588Q9Y4M8 146 aa6.51□□□□□ -1.37
RFX3-201ENST00000302303 TNFRSF18Q9Y5U5 241 aa6.51□□□□□ -1.37
RFX3-201ENST00000302303 TSHBP01222 138 aa6.5□□□□□ -1.37
RFX3-201ENST00000302303 SRIP30626 198 aa6.5□□□□□ -1.37
RFX3-201ENST00000302303 TIRAPP58753 221 aa6.5□□□□□ -1.37
RFX3-201ENST00000302303 GTSF1LQ9H1H1 148 aa6.5□□□□□ -1.37
RFX3-201ENST00000302303 ST20Q9HBF5 79 aa6.5□□□□□ -1.37
RFX3-201ENST00000302303 LAMTOR2Q9Y2Q5 125 aa6.5□□□□□ -1.37
RFX3-201ENST00000302303 TMA7Q9Y2S6 64 aaKnown RBP6.5□□□□□ -1.37
RFX3-201ENST00000302303 PPP1R17O96001 155 aa6.5□□□□□ -1.37
RFX3-201ENST00000302303 DAZ4Q86SG3 579 aaKnown RBP6.5□□□□□ -1.37
RFX3-201ENST00000302303 C18orf32Q8TCD1 76 aa6.5□□□□□ -1.37
RFX3-201ENST00000302303 DAZ3Q9NR90 486 aaKnown RBP6.5□□□□□ -1.37
RFX3-201ENST00000302303 ALMS1Q8TCU4 4167 aa6.5□□□□□ -1.37
RFX3-201ENST00000302303 LINC01546A6NGU7 62 aa6.49□□□□□ -1.37
RFX3-201ENST00000302303 IQCJQ1A5X6 159 aa6.49□□□□□ -1.37
RFX3-201ENST00000302303 SH2D6Q7Z4S9 175 aa6.49□□□□□ -1.37
RFX3-201ENST00000302303 CHCHD7Q9BUK0 85 aa6.49□□□□□ -1.37
RFX3-201ENST00000302303 SMIM2Q9BVW6 85 aa6.49□□□□□ -1.37
RFX3-201ENST00000302303 TRBV6-8A0A0A6YYG3 113 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms