RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 CHCHD5Q9BSY4 110 aa7.67□□□□□ -1.18
LMX1A-201ENST00000294816 SORL1Q92673 2214 aa7.67□□□□□ -1.18
LMX1A-201ENST00000294816 IGHV4OR15-8A0A075B7B6 117 aa7.67□□□□□ -1.18
LMX1A-201ENST00000294816 A0A087WW49 117 aa7.67□□□□□ -1.18
LMX1A-201ENST00000294816 CCL21O00585 134 aa7.67□□□□□ -1.18
LMX1A-201ENST00000294816 MED14OSP0DP75 135 aa7.67□□□□□ -1.18
LMX1A-201ENST00000294816 PF4V1P10720 104 aa7.67□□□□□ -1.18
LMX1A-201ENST00000294816 HTN1P15515 57 aa7.67□□□□□ -1.18
LMX1A-201ENST00000294816 TIMM21Q9BVV7 248 aa7.67□□□□□ -1.18
LMX1A-201ENST00000294816 ICOSQ9Y6W8 199 aa7.67□□□□□ -1.18
LMX1A-201ENST00000294816 LGALS9O00182 355 aa7.66□□□□□ -1.18
LMX1A-201ENST00000294816 RHPN1-AS1Q9BWJ2 59 aa7.66□□□□□ -1.18
LMX1A-201ENST00000294816 IGHV3-73A0A0B4J1V6 119 aa7.66□□□□□ -1.18
LMX1A-201ENST00000294816 CD28P10747 220 aa7.66□□□□□ -1.18
LMX1A-201ENST00000294816 LY6EQ16553 131 aa7.66□□□□□ -1.18
LMX1A-201ENST00000294816 KLK9Q9UKQ9 250 aa7.66□□□□□ -1.18
LMX1A-201ENST00000294816 A8MZ25 164 aa7.65□□□□□ -1.18
LMX1A-201ENST00000294816 IGHV3-30-3P0DP02 117 aa7.65□□□□□ -1.18
LMX1A-201ENST00000294816 CEMP1Q6PRD7 247 aaPredicted RBP7.65□□□□□ -1.18
LMX1A-201ENST00000294816 MDFICQ9P1T7 246 aa7.65□□□□□ -1.18
LMX1A-201ENST00000294816 SIRPDQ9H106 197 aa7.65□□□□□ -1.18
LMX1A-201ENST00000294816 PRRC2AP48634 2157 aaKnown RBP7.65□□□□□ -1.18
LMX1A-201ENST00000294816 TRBV27A0A0K0K1C4 114 aa7.65□□□□□ -1.19
LMX1A-201ENST00000294816 H7C423 109 aa7.65□□□□□ -1.19
LMX1A-201ENST00000294816 DAND5Q8N907 189 aa7.65□□□□□ -1.19
LMX1A-201ENST00000294816 EDN2P20800 178 aa7.64□□□□□ -1.19
LMX1A-201ENST00000294816 CFAP161Q6P656 301 aa7.64□□□□□ -1.19
LMX1A-201ENST00000294816 C5orf56Q8N8D9 126 aa7.64□□□□□ -1.19
LMX1A-201ENST00000294816 A0A0U1RRA0 63 aa7.64□□□□□ -1.19
LMX1A-201ENST00000294816 SOCS3O14543 225 aa7.64□□□□□ -1.19
LMX1A-201ENST00000294816 NDUFA12Q9UI09 145 aa7.64□□□□□ -1.19
LMX1A-201ENST00000294816 CREBBPQ92793 2442 aa7.64□□□□□ -1.19
LMX1A-201ENST00000294816 TRBV30A0A0K0K1B3 111 aa7.63□□□□□ -1.19
LMX1A-201ENST00000294816 RPL13AP40429 203 aaKnown RBP7.63□□□□□ -1.19
LMX1A-201ENST00000294816 IGLV4-3A0A075B6K6 122 aa7.63□□□□□ -1.19
LMX1A-201ENST00000294816 NDUFA4O00483 81 aa7.63□□□□□ -1.19
LMX1A-201ENST00000294816 NPFFO15130 113 aa7.63□□□□□ -1.19
LMX1A-201ENST00000294816 ADAMTSL4-AS1Q5T5F5 129 aa7.63□□□□□ -1.19
LMX1A-201ENST00000294816 BRD3OSQ6XYD6 125 aa7.63□□□□□ -1.19
LMX1A-201ENST00000294816 C20orf203Q8NBC4 194 aa7.63□□□□□ -1.19
LMX1A-201ENST00000294816 FAM223BA6NKX1 122 aa7.63□□□□□ -1.19
LMX1A-201ENST00000294816 M0QXV9 152 aa7.63□□□□□ -1.19
LMX1A-201ENST00000294816 Q6Q795 121 aa7.63□□□□□ -1.19
LMX1A-201ENST00000294816 FAM223AQ8IWN6 122 aa7.63□□□□□ -1.19
LMX1A-201ENST00000294816 FAM110AQ9BQ89 295 aa7.63□□□□□ -1.19
LMX1A-201ENST00000294816 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.62□□□□□ -1.19
LMX1A-201ENST00000294816 M0QY20 66 aa7.62□□□□□ -1.19
LMX1A-201ENST00000294816 IGHV1-69P01742 117 aa7.62□□□□□ -1.19
LMX1A-201ENST00000294816 CDSNQ15517 529 aa7.62□□□□□ -1.19
LMX1A-201ENST00000294816 RELNP78509 3460 aa7.62□□□□□ -1.19
LMX1A-201ENST00000294816 NXPH4O95158 308 aa7.62□□□□□ -1.19
LMX1A-201ENST00000294816 RHOHQ15669 191 aa7.62□□□□□ -1.19
LMX1A-201ENST00000294816 IGF2-ASQ6U949 168 aa7.62□□□□□ -1.19
LMX1A-201ENST00000294816 TRGV11A0A075B6L2 103 aa7.62□□□□□ -1.19
LMX1A-201ENST00000294816 I3L3M4 83 aa7.62□□□□□ -1.19
LMX1A-201ENST00000294816 POM121L12Q8N7R1 296 aa7.62□□□□□ -1.19
LMX1A-201ENST00000294816 DUX5Q96PT3 197 aa7.62□□□□□ -1.19
LMX1A-201ENST00000294816 MOB4Q9Y3A3 225 aa7.62□□□□□ -1.19
LMX1A-201ENST00000294816 FAM236AA0A1B0GUQ0 79 aa7.61□□□□□ -1.19
LMX1A-201ENST00000294816 FAM236BA0A1B0GV22 79 aa7.61□□□□□ -1.19
LMX1A-201ENST00000294816 ID1P41134 155 aa7.61□□□□□ -1.19
LMX1A-201ENST00000294816 SPINK13Q1W4C9 94 aa7.61□□□□□ -1.19
LMX1A-201ENST00000294816 TMEM95Q3KNT9 176 aa7.61□□□□□ -1.19
LMX1A-201ENST00000294816 NSUN5P1Q3KNT7 163 aa7.61□□□□□ -1.19
LMX1A-201ENST00000294816 FAM19A4Q96LR4 140 aa7.61□□□□□ -1.19
LMX1A-201ENST00000294816 CEP295Q9C0D2 2601 aa7.61□□□□□ -1.19
LMX1A-201ENST00000294816 TRBV6-5A0A0K0K1A5 114 aa7.6□□□□□ -1.19
LMX1A-201ENST00000294816 H3BT86 120 aa7.6□□□□□ -1.19
LMX1A-201ENST00000294816 KNCNA6PVL3 124 aa7.6□□□□□ -1.19
LMX1A-201ENST00000294816 KLLNB2CW77 178 aa7.6□□□□□ -1.19
LMX1A-201ENST00000294816 ZNF625Q96I27 306 aaPredicted RBP7.6□□□□□ -1.19
LMX1A-201ENST00000294816 IGHV3-16A0A0C4DH30 117 aa7.6□□□□□ -1.19
LMX1A-201ENST00000294816 TMEM101Q96IK0 257 aa7.59□□□□□ -1.19
LMX1A-201ENST00000294816 ATRXP46100 2492 aa7.59□□□□□ -1.19
LMX1A-201ENST00000294816 NACAE9PAV3 2078 aa7.59□□□□□ -1.19
LMX1A-201ENST00000294816 BPESC1Q9GZL8 116 aa7.59□□□□□ -1.19
LMX1A-201ENST00000294816 DAZ1Q9NQZ3 744 aaKnown RBP7.59□□□□□ -1.19
LMX1A-201ENST00000294816 PROK1P58294 105 aa7.59□□□□□ -1.2
LMX1A-201ENST00000294816 MIAQ16674 131 aa7.58□□□□□ -1.2
LMX1A-201ENST00000294816 APRG1Q8IVJ8 170 aa7.58□□□□□ -1.2
LMX1A-201ENST00000294816 LITAFQ99732 161 aa7.58□□□□□ -1.2
LMX1A-201ENST00000294816 IGHV1-58A0A0C4DH39 117 aa7.58□□□□□ -1.2
LMX1A-201ENST00000294816 A0A0J9YX75 114 aa7.58□□□□□ -1.2
LMX1A-201ENST00000294816 LST1O00453 97 aa7.58□□□□□ -1.2
LMX1A-201ENST00000294816 DOPEY2Q9Y3R5 2298 aa7.58□□□□□ -1.2
LMX1A-201ENST00000294816 IGHV1OR15-1A0A075B7D0 117 aa7.57□□□□□ -1.2
LMX1A-201ENST00000294816 C11orf71Q6IPW1 123 aa7.57□□□□□ -1.2
LMX1A-201ENST00000294816 TNFRSF18Q9Y5U5 241 aa7.57□□□□□ -1.2
LMX1A-201ENST00000294816 PTPRQQ9UMZ3 2332 aa7.57□□□□□ -1.2
LMX1A-201ENST00000294816 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.57□□□□□ -1.2
LMX1A-201ENST00000294816 IGKV2-29A2NJV5 120 aaPredicted RBP7.57□□□□□ -1.2
LMX1A-201ENST00000294816 C9orf153Q5TBE3 101 aa7.57□□□□□ -1.2
LMX1A-201ENST00000294816 HRNRQ86YZ3 2850 aaPredicted RBP7.57□□□□□ -1.2
LMX1A-201ENST00000294816 IGHV3-38A0A0C4DH36 116 aa7.57□□□□□ -1.2
LMX1A-201ENST00000294816 BLCAPP62952 87 aa7.57□□□□□ -1.2
LMX1A-201ENST00000294816 TMEM61Q8N0U2 210 aa7.57□□□□□ -1.2
LMX1A-201ENST00000294816 C9orf85Q96MD7 179 aa7.57□□□□□ -1.2
LMX1A-201ENST00000294816 KLK9Q2XQG4 91 aa7.56□□□□□ -1.2
LMX1A-201ENST00000294816 YAE1D1Q9NRH1 226 aa7.56□□□□□ -1.2
LMX1A-201ENST00000294816 PPDPFQ9H3Y8 114 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms