RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 TENM3Q9P273 2699 aa13.4□□□□□ -0.26
PDLIM3-202ENST00000284770 PRSS47A8MTI9 375 aa13.4□□□□□ -0.26
PDLIM3-202ENST00000284770 LINC00614P0C842 121 aa13.4□□□□□ -0.26
PDLIM3-202ENST00000284770 S100A2P29034 98 aa13.4□□□□□ -0.26
PDLIM3-202ENST00000284770 RNASEKQ6P5S7 137 aaKnown RBP13.4□□□□□ -0.26
PDLIM3-202ENST00000284770 LOC389332A0A1B0GUA5 103 aa13.39□□□□□ -0.27
PDLIM3-202ENST00000284770 IFI27P40305 119 aaPredicted RBP13.39□□□□□ -0.27
PDLIM3-202ENST00000284770 CHCHD1Q96BP2 118 aaKnown RBP13.39□□□□□ -0.27
PDLIM3-202ENST00000284770 RPL39LQ96EH5 51 aaKnown RBP13.39□□□□□ -0.27
PDLIM3-202ENST00000284770 MAP1LC3AQ9H492 121 aa13.39□□□□□ -0.27
PDLIM3-202ENST00000284770 FABP4P15090 132 aa13.38□□□□□ -0.27
PDLIM3-202ENST00000284770 Q6ZSN1 163 aa13.38□□□□□ -0.27
PDLIM3-202ENST00000284770 M0QY20 66 aa13.37□□□□□ -0.27
PDLIM3-202ENST00000284770 PRSS3P2Q8NHM4 247 aa13.37□□□□□ -0.27
PDLIM3-202ENST00000284770 HUWE1Q7Z6Z7 4374 aaKnown RBP13.37□□□□□ -0.27
PDLIM3-202ENST00000284770 C12orf74Q32Q52 190 aa13.37□□□□□ -0.27
PDLIM3-202ENST00000284770 EDA2RQ9HAV5 297 aa13.37□□□□□ -0.27
PDLIM3-202ENST00000284770 IGLV2-18A0A075B6J9 118 aa13.36□□□□□ -0.27
PDLIM3-202ENST00000284770 PPP1R17O96001 155 aa13.36□□□□□ -0.27
PDLIM3-202ENST00000284770 FHL2Q14192 279 aa13.36□□□□□ -0.27
PDLIM3-202ENST00000284770 TMEM18Q96B42 140 aa13.36□□□□□ -0.27
PDLIM3-202ENST00000284770 C20orf78Q9BR46 151 aa13.36□□□□□ -0.27
PDLIM3-202ENST00000284770 TRGV4A0A0C4DH28 118 aa13.35□□□□□ -0.27
PDLIM3-202ENST00000284770 H7C1H1 209 aa13.35□□□□□ -0.27
PDLIM3-202ENST00000284770 HSBP1O75506 76 aa13.35□□□□□ -0.27
PDLIM3-202ENST00000284770 ATP5G1P05496 136 aa13.35□□□□□ -0.27
PDLIM3-202ENST00000284770 C11orf45Q8TAV5 145 aa13.35□□□□□ -0.27
PDLIM3-202ENST00000284770 PACRGQ96M98 296 aaPredicted RBP13.35□□□□□ -0.27
PDLIM3-202ENST00000284770 AP5S1Q9NUS5 200 aa13.35□□□□□ -0.27
PDLIM3-202ENST00000284770 DNAH9Q9NYC9 4486 aa13.35□□□□□ -0.27
PDLIM3-202ENST00000284770 LINC01546A6NGU7 62 aa13.35□□□□□ -0.27
PDLIM3-202ENST00000284770 SUMO2P61956 95 aaKnown RBP13.35□□□□□ -0.27
PDLIM3-202ENST00000284770 FA2HQ7L5A8 372 aa13.35□□□□□ -0.27
PDLIM3-202ENST00000284770 FAM19A2Q8N3H0 131 aa13.35□□□□□ -0.27
PDLIM3-202ENST00000284770 NXT2Q9NPJ8 142 aaKnown RBP13.35□□□□□ -0.27
PDLIM3-202ENST00000284770 PMCHP20382 165 aa13.34□□□□□ -0.27
PDLIM3-202ENST00000284770 AMTP48728 403 aa13.34□□□□□ -0.27
PDLIM3-202ENST00000284770 AKR1D1P51857 326 aa13.34□□□□□ -0.27
PDLIM3-202ENST00000284770 Q8N8P6 123 aa13.34□□□□□ -0.27
PDLIM3-202ENST00000284770 SLC25A29Q8N8R3 303 aa13.34□□□□□ -0.27
PDLIM3-202ENST00000284770 TRBV6-5A0A0K0K1A5 114 aa13.33□□□□□ -0.28
PDLIM3-202ENST00000284770 SMIM2Q9BVW6 85 aa13.33□□□□□ -0.28
PDLIM3-202ENST00000284770 IGHV1-24A0A0C4DH33 117 aa13.32□□□□□ -0.28
PDLIM3-202ENST00000284770 TRBV6-4A0A1B0GX49 114 aa13.32□□□□□ -0.28
PDLIM3-202ENST00000284770 OR10D4PQ8NGN7 298 aa13.32□□□□□ -0.28
PDLIM3-202ENST00000284770 NIT2Q9NQR4 276 aa13.32□□□□□ -0.28
PDLIM3-202ENST00000284770 HHLA3Q9XRX5 114 aa13.32□□□□□ -0.28
PDLIM3-202ENST00000284770 K7EQD1 137 aa13.32□□□□□ -0.28
PDLIM3-202ENST00000284770 P0DMU3 169 aa13.32□□□□□ -0.28
PDLIM3-202ENST00000284770 FAM231AP0DMU4 169 aa13.32□□□□□ -0.28
PDLIM3-202ENST00000284770 FAM231CP0DMU5 169 aa13.32□□□□□ -0.28
PDLIM3-202ENST00000284770 NANOS2P60321 138 aaKnown RBP13.32□□□□□ -0.28
PDLIM3-202ENST00000284770 PMCHL1Q16048 86 aa13.32□□□□□ -0.28
PDLIM3-202ENST00000284770 POLR2KP53803 58 aaKnown RBP13.31□□□□□ -0.28
PDLIM3-202ENST00000284770 RPL32P62910 135 aaKnown RBP13.31□□□□□ -0.28
PDLIM3-202ENST00000284770 PRKDCP78527 4128 aaKnown RBP13.31□□□□□ -0.28
PDLIM3-202ENST00000284770 Q6ZTC4 211 aa13.31□□□□□ -0.28
PDLIM3-202ENST00000284770 ST20Q9HBF5 79 aa13.31□□□□□ -0.28
PDLIM3-202ENST00000284770 TRBV10-1A0A0K0K1A3 114 aa13.3□□□□□ -0.28
PDLIM3-202ENST00000284770 TMEM70Q9BUB7 260 aa13.3□□□□□ -0.28
PDLIM3-202ENST00000284770 Q9UF83 564 aa13.3□□□□□ -0.28
PDLIM3-202ENST00000284770 PRO0255Q9UI72 69 aa13.3□□□□□ -0.28
PDLIM3-202ENST00000284770 A0A096LNJ9 63 aa13.3□□□□□ -0.28
PDLIM3-202ENST00000284770 F5H768 121 aa13.3□□□□□ -0.28
PDLIM3-202ENST00000284770 RHOHQ15669 191 aa13.3□□□□□ -0.28
PDLIM3-202ENST00000284770 HTN3P15516 51 aa13.29□□□□□ -0.28
PDLIM3-202ENST00000284770 CRYBA4P53673 196 aa13.29□□□□□ -0.28
PDLIM3-202ENST00000284770 NEXN-AS1Q8NBZ9 246 aa13.29□□□□□ -0.28
PDLIM3-202ENST00000284770 DNAJC30Q96LL9 226 aa13.29□□□□□ -0.28
PDLIM3-202ENST00000284770 COL7A1Q02388 2944 aa13.29□□□□□ -0.28
PDLIM3-202ENST00000284770 SDHAF1A6NFY7 115 aa13.28□□□□□ -0.28
PDLIM3-202ENST00000284770 PRADC1Q9BSG0 188 aa13.28□□□□□ -0.28
PDLIM3-202ENST00000284770 TRBV27A0A0K0K1C4 114 aa13.27□□□□□ -0.28
PDLIM3-202ENST00000284770 TNFRSF18Q9Y5U5 241 aa13.27□□□□□ -0.28
PDLIM3-202ENST00000284770 TCAPO15273 167 aa13.27□□□□□ -0.29
PDLIM3-202ENST00000284770 TRBV7-3A0A075B6L6 115 aa13.26□□□□□ -0.29
PDLIM3-202ENST00000284770 NEGR1Q7Z3B1 354 aa13.26□□□□□ -0.29
PDLIM3-202ENST00000284770 K7EMI3 77 aa13.25□□□□□ -0.29
PDLIM3-202ENST00000284770 VCYO14598 125 aa13.25□□□□□ -0.29
PDLIM3-202ENST00000284770 PAX4O43316 350 aa13.25□□□□□ -0.29
PDLIM3-202ENST00000284770 RPL36AP83881 106 aaKnown RBP13.25□□□□□ -0.29
PDLIM3-202ENST00000284770 LAGE3Q14657 143 aa13.25□□□□□ -0.29
PDLIM3-202ENST00000284770 ZNRF2Q8NHG8 242 aa13.25□□□□□ -0.29
PDLIM3-202ENST00000284770 RPL36ALQ969Q0 106 aaKnown RBP13.25□□□□□ -0.29
PDLIM3-202ENST00000284770 TRAV26-1A0A087WT03 109 aa13.25□□□□□ -0.29
PDLIM3-202ENST00000284770 LOC100131303A0A0U1RQF7 123 aa13.25□□□□□ -0.29
PDLIM3-202ENST00000284770 VSIG2Q96IQ7 327 aa13.25□□□□□ -0.29
PDLIM3-202ENST00000284770 HBDP02042 147 aa13.24□□□□□ -0.29
PDLIM3-202ENST00000284770 FCER1GP30273 86 aa13.24□□□□□ -0.29
PDLIM3-202ENST00000284770 DEFB131BA0A096LNP1 70 aa13.23□□□□□ -0.29
PDLIM3-202ENST00000284770 A0A0J9YY99 117 aa13.23□□□□□ -0.29
PDLIM3-202ENST00000284770 GAGE12JA6NER3 117 aa13.23□□□□□ -0.29
PDLIM3-202ENST00000284770 LEPROTL1O95214 131 aa13.23□□□□□ -0.29
PDLIM3-202ENST00000284770 GYPEP15421 78 aa13.23□□□□□ -0.29
PDLIM3-202ENST00000284770 GAGE1Q13065 139 aa13.23□□□□□ -0.29
PDLIM3-202ENST00000284770 GAGE4Q13068 117 aa13.23□□□□□ -0.29
PDLIM3-202ENST00000284770 GAGE5Q13069 117 aa13.23□□□□□ -0.29
PDLIM3-202ENST00000284770 GAGE13Q4V321 117 aa13.23□□□□□ -0.29
PDLIM3-202ENST00000284770 LINC00173Q6ZV60 143 aa13.23□□□□□ -0.29
PDLIM3-202ENST00000284770 FBN3Q75N90 2809 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms