RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 GAGE10A6NGK3 116 aa8.47□□□□□ -1.05
SSRP1-201ENST00000278412 LINC00315P59091 139 aa8.47□□□□□ -1.05
SSRP1-201ENST00000278412 GATD1Q8NB37 220 aa8.47□□□□□ -1.05
SSRP1-201ENST00000278412 DEFB4AO15263 64 aa8.47□□□□□ -1.05
SSRP1-201ENST00000278412 CKS2P33552 79 aa8.47□□□□□ -1.05
SSRP1-201ENST00000278412 IFI27P40305 119 aaPredicted RBP8.47□□□□□ -1.05
SSRP1-201ENST00000278412 ZNF876PQ49A33 203 aa8.47□□□□□ -1.05
SSRP1-201ENST00000278412 GTF2H5Q6ZYL4 71 aa8.47□□□□□ -1.05
SSRP1-201ENST00000278412 GTSCR1Q86UQ5 136 aa8.47□□□□□ -1.05
SSRP1-201ENST00000278412 EMP1P54849 157 aa8.46□□□□□ -1.05
SSRP1-201ENST00000278412 LINC00173Q6ZV60 143 aa8.46□□□□□ -1.05
SSRP1-201ENST00000278412 PRELID3AQ96N28 172 aa8.46□□□□□ -1.05
SSRP1-201ENST00000278412 IGHV4-4A0A075B6R2 117 aa8.46□□□□□ -1.06
SSRP1-201ENST00000278412 P0DMU3 169 aa8.46□□□□□ -1.06
SSRP1-201ENST00000278412 FAM231AP0DMU4 169 aa8.46□□□□□ -1.06
SSRP1-201ENST00000278412 FAM231CP0DMU5 169 aa8.46□□□□□ -1.06
SSRP1-201ENST00000278412 OR2K2Q8NGT1 345 aa8.46□□□□□ -1.06
SSRP1-201ENST00000278412 KIF25-AS1Q9Y6Z4 181 aa8.46□□□□□ -1.06
SSRP1-201ENST00000278412 Q6ZSN1 163 aa8.45□□□□□ -1.06
SSRP1-201ENST00000278412 TMEM158Q8WZ71 300 aa8.45□□□□□ -1.06
SSRP1-201ENST00000278412 COL7A1Q02388 2944 aa8.45□□□□□ -1.06
SSRP1-201ENST00000278412 SLC25A34Q6PIV7 304 aa8.45□□□□□ -1.06
SSRP1-201ENST00000278412 SHISA2Q6UWI4 295 aa8.45□□□□□ -1.06
SSRP1-201ENST00000278412 INSL3P51460 131 aa8.44□□□□□ -1.06
SSRP1-201ENST00000278412 DEFB135Q30KP9 77 aa8.44□□□□□ -1.06
SSRP1-201ENST00000278412 U3KQK5 164 aa8.44□□□□□ -1.06
SSRP1-201ENST00000278412 NXPH4O95158 308 aa8.44□□□□□ -1.06
SSRP1-201ENST00000278412 CRYGDP07320 174 aa8.44□□□□□ -1.06
SSRP1-201ENST00000278412 ORMDL3Q8N138 153 aa8.44□□□□□ -1.06
SSRP1-201ENST00000278412 NRACQ8N912 160 aa8.44□□□□□ -1.06
SSRP1-201ENST00000278412 SIGMAR1Q99720 223 aa8.44□□□□□ -1.06
SSRP1-201ENST00000278412 MCRIP2Q9BUT9 160 aaKnown RBP8.44□□□□□ -1.06
SSRP1-201ENST00000278412 TP73-AS1Q9UF72 201 aa8.44□□□□□ -1.06
SSRP1-201ENST00000278412 PLAC8L1A1L4L8 177 aa8.44□□□□□ -1.06
SSRP1-201ENST00000278412 K7EP34 96 aa8.44□□□□□ -1.06
SSRP1-201ENST00000278412 TNFRSF6BO95407 300 aa8.44□□□□□ -1.06
SSRP1-201ENST00000278412 IGHV3-53P01767 116 aa8.44□□□□□ -1.06
SSRP1-201ENST00000278412 Q6ZTI0 123 aa8.44□□□□□ -1.06
SSRP1-201ENST00000278412 RASL10AQ92737 203 aa8.44□□□□□ -1.06
SSRP1-201ENST00000278412 A0A1B0GW15 77 aa8.43□□□□□ -1.06
SSRP1-201ENST00000278412 IGHV4-30-4P0DP06 118 aa8.43□□□□□ -1.06
SSRP1-201ENST00000278412 CACNG7P62955 275 aa8.43□□□□□ -1.06
SSRP1-201ENST00000278412 SPATA12Q7Z6I5 190 aa8.43□□□□□ -1.06
SSRP1-201ENST00000278412 POM121L12Q8N7R1 296 aa8.43□□□□□ -1.06
SSRP1-201ENST00000278412 F5H697 171 aa8.43□□□□□ -1.06
SSRP1-201ENST00000278412 NOP10Q9NPE3 64 aaKnown RBP8.43□□□□□ -1.06
SSRP1-201ENST00000278412 CRYBA4P53673 196 aa8.42□□□□□ -1.06
SSRP1-201ENST00000278412 SEC11AP67812 179 aa8.42□□□□□ -1.06
SSRP1-201ENST00000278412 SUMO4Q6EEV6 95 aa8.42□□□□□ -1.06
SSRP1-201ENST00000278412 FAM110AQ9BQ89 295 aa8.42□□□□□ -1.06
SSRP1-201ENST00000278412 TRGV11A0A075B6L2 103 aa8.42□□□□□ -1.06
SSRP1-201ENST00000278412 MORN3Q6PF18 240 aaPredicted RBP8.42□□□□□ -1.06
SSRP1-201ENST00000278412 AP1S3Q96PC3 154 aa8.42□□□□□ -1.06
SSRP1-201ENST00000278412 DPH3P1Q9H4G8 78 aa8.42□□□□□ -1.06
SSRP1-201ENST00000278412 RETNQ9HD89 108 aa8.42□□□□□ -1.06
SSRP1-201ENST00000278412 STAB2Q8WWQ8 2551 aa8.41□□□□□ -1.06
SSRP1-201ENST00000278412 TRAV26-1A0A087WT03 109 aa8.41□□□□□ -1.06
SSRP1-201ENST00000278412 A0A096LNJ9 63 aa8.41□□□□□ -1.06
SSRP1-201ENST00000278412 TRGV1A0A0A0MS02 117 aa8.41□□□□□ -1.06
SSRP1-201ENST00000278412 IGHV1-24A0A0C4DH33 117 aa8.41□□□□□ -1.06
SSRP1-201ENST00000278412 C9orf118A6NHY6 69 aa8.41□□□□□ -1.06
SSRP1-201ENST00000278412 HSBP1O75506 76 aa8.41□□□□□ -1.06
SSRP1-201ENST00000278412 MED14OSP0DP75 135 aa8.41□□□□□ -1.06
SSRP1-201ENST00000278412 TMEM70Q9BUB7 260 aa8.41□□□□□ -1.06
SSRP1-201ENST00000278412 GTSF1LQ9H1H1 148 aa8.41□□□□□ -1.06
SSRP1-201ENST00000278412 H3BRM9 83 aa8.4□□□□□ -1.06
SSRP1-201ENST00000278412 SMAGPQ0VAQ4 97 aa8.4□□□□□ -1.06
SSRP1-201ENST00000278412 ZNF56Q15929 161 aa8.4□□□□□ -1.06
SSRP1-201ENST00000278412 OR5A1Q8NGJ0 315 aa8.4□□□□□ -1.06
SSRP1-201ENST00000278412 PRSS3P2Q8NHM4 247 aa8.4□□□□□ -1.06
SSRP1-201ENST00000278412 WIPF1O43516 503 aa8.4□□□□□ -1.06
SSRP1-201ENST00000278412 CKS1BP61024 79 aa8.4□□□□□ -1.06
SSRP1-201ENST00000278412 ZNF415Q09FC8 603 aa8.39□□□□□ -1.07
SSRP1-201ENST00000278412 HSD52Q0P140 79 aa8.39□□□□□ -1.07
SSRP1-201ENST00000278412 ZNF479Q96JC4 524 aa8.39□□□□□ -1.07
SSRP1-201ENST00000278412 X6R8D5 127 aa8.39□□□□□ -1.07
SSRP1-201ENST00000278412 hDV102S1A0JD36 115 aa8.39□□□□□ -1.07
SSRP1-201ENST00000278412 H0Y8G0 127 aa8.39□□□□□ -1.07
SSRP1-201ENST00000278412 M0R2P5 195 aa8.39□□□□□ -1.07
SSRP1-201ENST00000278412 GAGE7O76087 117 aa8.39□□□□□ -1.07
SSRP1-201ENST00000278412 GAGE12FP0CL80 117 aa8.39□□□□□ -1.07
SSRP1-201ENST00000278412 GAGE12GP0CL81 117 aa8.39□□□□□ -1.07
SSRP1-201ENST00000278412 GAGE12IP0CL82 117 aa8.39□□□□□ -1.07
SSRP1-201ENST00000278412 CFAP126Q5VTH2 177 aa8.39□□□□□ -1.07
SSRP1-201ENST00000278412 IL17DQ8TAD2 202 aa8.39□□□□□ -1.07
SSRP1-201ENST00000278412 IGLV2-18A0A075B6J9 118 aa8.38□□□□□ -1.07
SSRP1-201ENST00000278412 CMC4P56277 68 aaPredicted RBP8.38□□□□□ -1.07
SSRP1-201ENST00000278412 PMCHL2Q9BQD1 86 aa8.38□□□□□ -1.07
SSRP1-201ENST00000278412 C2orf91Q6ZV80 131 aa8.37□□□□□ -1.07
SSRP1-201ENST00000278412 TMEM263Q8WUH6 116 aaKnown RBP8.37□□□□□ -1.07
SSRP1-201ENST00000278412 SYS1-DBNDD2H3BUS1 97 aa8.37□□□□□ -1.07
SSRP1-201ENST00000278412 M0QY20 66 aa8.37□□□□□ -1.07
SSRP1-201ENST00000278412 RRN3P1Q2M238 152 aa8.37□□□□□ -1.07
SSRP1-201ENST00000278412 TMEM97Q5BJF2 176 aa8.37□□□□□ -1.07
SSRP1-201ENST00000278412 FA2HQ7L5A8 372 aa8.37□□□□□ -1.07
SSRP1-201ENST00000278412 SYT8Q8NBV8 401 aa8.37□□□□□ -1.07
SSRP1-201ENST00000278412 AP5S1Q9NUS5 200 aa8.37□□□□□ -1.07
SSRP1-201ENST00000278412 DEFB130BP0DP73 79 aa8.36□□□□□ -1.07
SSRP1-201ENST00000278412 DEFB130AP0DP74 79 aa8.36□□□□□ -1.07
SSRP1-201ENST00000278412 C18orf15Q96N68 181 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms