RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 VCYO14598 125 aa9.52□□□□□ -0.88
CPSF6-201ENST00000266679 RPL39P62891 51 aaKnown RBP9.52□□□□□ -0.88
CPSF6-201ENST00000266679 CEND1Q8N111 149 aa9.52□□□□□ -0.88
CPSF6-201ENST00000266679 OR11H12B2RN74 326 aa9.52□□□□□ -0.89
CPSF6-201ENST00000266679 SMIM13P0DJ93 91 aa9.52□□□□□ -0.89
CPSF6-201ENST00000266679 RBMY1A1P0DJD3 496 aaKnown RBP9.52□□□□□ -0.89
CPSF6-201ENST00000266679 RBMY1CP0DJD4 496 aa9.52□□□□□ -0.89
CPSF6-201ENST00000266679 DEFB131AP59861 70 aa9.52□□□□□ -0.89
CPSF6-201ENST00000266679 RBMY1FQ15415 496 aaKnown RBP9.52□□□□□ -0.89
CPSF6-201ENST00000266679 MORN3Q6PF18 240 aaPredicted RBP9.52□□□□□ -0.89
CPSF6-201ENST00000266679 OR11H1Q8NG94 326 aa9.52□□□□□ -0.89
CPSF6-201ENST00000266679 OR11H2Q8NH07 326 aa9.52□□□□□ -0.89
CPSF6-201ENST00000266679 KIR2DL4Q99706 377 aa9.52□□□□□ -0.89
CPSF6-201ENST00000266679 ZNF256Q9Y2P7 627 aaPredicted RBP9.52□□□□□ -0.89
CPSF6-201ENST00000266679 LINC01619G3V211 115 aa9.51□□□□□ -0.89
CPSF6-201ENST00000266679 TSHBP01222 138 aa9.51□□□□□ -0.89
CPSF6-201ENST00000266679 NHP2Q9NX24 153 aaKnown RBP9.51□□□□□ -0.89
CPSF6-201ENST00000266679 CRYGDP07320 174 aa9.51□□□□□ -0.89
CPSF6-201ENST00000266679 HTN1P15515 57 aa9.51□□□□□ -0.89
CPSF6-201ENST00000266679 EMP1P54849 157 aa9.51□□□□□ -0.89
CPSF6-201ENST00000266679 Q8N2B8 174 aa9.51□□□□□ -0.89
CPSF6-201ENST00000266679 TRGV11A0A075B6L2 103 aa9.5□□□□□ -0.89
CPSF6-201ENST00000266679 K7EP34 96 aa9.5□□□□□ -0.89
CPSF6-201ENST00000266679 ZNF876PQ49A33 203 aa9.5□□□□□ -0.89
CPSF6-201ENST00000266679 GTF2H5Q6ZYL4 71 aa9.5□□□□□ -0.89
CPSF6-201ENST00000266679 PRADC1Q9BSG0 188 aa9.5□□□□□ -0.89
CPSF6-201ENST00000266679 SORL1Q92673 2214 aa9.5□□□□□ -0.89
CPSF6-201ENST00000266679 TRBV6-5A0A0K0K1A5 114 aa9.5□□□□□ -0.89
CPSF6-201ENST00000266679 MYMXA0A1B0GTQ4 84 aa9.5□□□□□ -0.89
CPSF6-201ENST00000266679 A0A1W2PPM0 123 aa9.5□□□□□ -0.89
CPSF6-201ENST00000266679 M0QY20 66 aa9.5□□□□□ -0.89
CPSF6-201ENST00000266679 UFSP1Q6NVU6 142 aa9.5□□□□□ -0.89
CPSF6-201ENST00000266679 TRBV27A0A0K0K1C4 114 aa9.49□□□□□ -0.89
CPSF6-201ENST00000266679 RBMY1BA6NDE4 496 aaKnown RBP9.49□□□□□ -0.89
CPSF6-201ENST00000266679 RBMY1EA6NEQ0 496 aaKnown RBP9.49□□□□□ -0.89
CPSF6-201ENST00000266679 IGIPA6NJ69 53 aa9.49□□□□□ -0.89
CPSF6-201ENST00000266679 RBMY1DP0C7P1 496 aaKnown RBP9.49□□□□□ -0.89
CPSF6-201ENST00000266679 HIST1H4GQ99525 98 aa9.49□□□□□ -0.89
CPSF6-201ENST00000266679 TM2D2Q9BX73 214 aa9.49□□□□□ -0.89
CPSF6-201ENST00000266679 CST9LQ9H4G1 147 aa9.49□□□□□ -0.89
CPSF6-201ENST00000266679 IGLV4-69A0A075B6H9 119 aa9.48□□□□□ -0.89
CPSF6-201ENST00000266679 GAGE12BA1L429 117 aa9.48□□□□□ -0.89
CPSF6-201ENST00000266679 C11orf86A6NJI1 115 aa9.48□□□□□ -0.89
CPSF6-201ENST00000266679 E9PLD3 99 aa9.48□□□□□ -0.89
CPSF6-201ENST00000266679 TRPT1Q86TN4 253 aaKnown RBP9.48□□□□□ -0.89
CPSF6-201ENST00000266679 TMEM61Q8N0U2 210 aa9.48□□□□□ -0.89
CPSF6-201ENST00000266679 KLHL30-AS1Q8NEE0 82 aa9.48□□□□□ -0.89
CPSF6-201ENST00000266679 DYNLRB2Q8TF09 96 aa9.48□□□□□ -0.89
CPSF6-201ENST00000266679 C4orf3Q8WVX3 66 aa9.48□□□□□ -0.89
CPSF6-201ENST00000266679 PEMTQ9UBM1 199 aa9.48□□□□□ -0.89
CPSF6-201ENST00000266679 PMVKQ15126 192 aa9.48□□□□□ -0.89
CPSF6-201ENST00000266679 CD300EQ496F6 205 aaPredicted RBP9.48□□□□□ -0.89
CPSF6-201ENST00000266679 SAMD5Q5TGI4 173 aa9.48□□□□□ -0.89
CPSF6-201ENST00000266679 DLX4Q92988 240 aaPredicted RBP9.48□□□□□ -0.89
CPSF6-201ENST00000266679 SPCS1Q9Y6A9 102 aa9.48□□□□□ -0.89
CPSF6-201ENST00000266679 TENM1Q9UKZ4 2725 aa9.47□□□□□ -0.89
CPSF6-201ENST00000266679 H3BMM0 161 aa9.47□□□□□ -0.89
CPSF6-201ENST00000266679 PRM2P04554 102 aa9.47□□□□□ -0.89
CPSF6-201ENST00000266679 RBX1P62877 108 aa9.47□□□□□ -0.89
CPSF6-201ENST00000266679 TAL2Q16559 108 aa9.47□□□□□ -0.89
CPSF6-201ENST00000266679 RNF151Q2KHN1 245 aa9.47□□□□□ -0.89
CPSF6-201ENST00000266679 TMEM141Q96I45 108 aa9.47□□□□□ -0.89
CPSF6-201ENST00000266679 TRBV7-3A0A075B6L6 115 aa9.47□□□□□ -0.89
CPSF6-201ENST00000266679 IGHV3-73A0A0B4J1V6 119 aa9.47□□□□□ -0.89
CPSF6-201ENST00000266679 LINC01549A6NIU2 74 aa9.47□□□□□ -0.89
CPSF6-201ENST00000266679 ZNF815PA8K554 130 aa9.47□□□□□ -0.89
CPSF6-201ENST00000266679 FABP2P12104 132 aa9.47□□□□□ -0.89
CPSF6-201ENST00000266679 PHLDA1Q8WV24 401 aaPredicted RBP9.47□□□□□ -0.89
CPSF6-201ENST00000266679 TIMM17AQ99595 171 aa9.47□□□□□ -0.89
CPSF6-201ENST00000266679 CBY1Q9Y3M2 126 aa9.47□□□□□ -0.89
CPSF6-201ENST00000266679 SCGB2A2Q13296 93 aa9.46□□□□□ -0.89
CPSF6-201ENST00000266679 NSUN5P1Q3KNT7 163 aa9.46□□□□□ -0.9
CPSF6-201ENST00000266679 MAP6D1Q9H9H5 199 aa9.46□□□□□ -0.9
CPSF6-201ENST00000266679 A8MTW9 85 aa9.45□□□□□ -0.9
CPSF6-201ENST00000266679 RHOHQ15669 191 aa9.45□□□□□ -0.9
CPSF6-201ENST00000266679 OCIAD2Q56VL3 154 aa9.45□□□□□ -0.9
CPSF6-201ENST00000266679 PLEKHB2Q96CS7 222 aa9.45□□□□□ -0.9
CPSF6-201ENST00000266679 OPRPNQ99935 248 aaPredicted RBP9.45□□□□□ -0.9
CPSF6-201ENST00000266679 P0DMU3 169 aa9.44□□□□□ -0.9
CPSF6-201ENST00000266679 FAM231AP0DMU4 169 aa9.44□□□□□ -0.9
CPSF6-201ENST00000266679 FAM231CP0DMU5 169 aa9.44□□□□□ -0.9
CPSF6-201ENST00000266679 HERVK_113P61574 105 aa9.44□□□□□ -0.9
CPSF6-201ENST00000266679 Q6ZSV7 163 aa9.44□□□□□ -0.9
CPSF6-201ENST00000266679 TRAV2A0A0B4J234 112 aa9.44□□□□□ -0.9
CPSF6-201ENST00000266679 DNAJC9-AS1A6NH13 148 aa9.44□□□□□ -0.9
CPSF6-201ENST00000266679 PROK1P58294 105 aa9.44□□□□□ -0.9
CPSF6-201ENST00000266679 C12orf74Q32Q52 190 aa9.44□□□□□ -0.9
CPSF6-201ENST00000266679 KRTAP24-1Q3LI83 254 aa9.44□□□□□ -0.9
CPSF6-201ENST00000266679 PAPPA-AS1Q5QFB9 102 aa9.44□□□□□ -0.9
CPSF6-201ENST00000266679 C11orf44Q8N8P7 122 aa9.44□□□□□ -0.9
CPSF6-201ENST00000266679 NBEAL1Q6ZS30 2694 aa9.43□□□□□ -0.9
CPSF6-201ENST00000266679 A0A1W2PRX2 142 aa9.43□□□□□ -0.9
CPSF6-201ENST00000266679 I3L3M4 83 aa9.43□□□□□ -0.9
CPSF6-201ENST00000266679 TMEM170BQ5T4T1 132 aa9.43□□□□□ -0.9
CPSF6-201ENST00000266679 SCGB1D4Q6XE38 83 aa9.43□□□□□ -0.9
CPSF6-201ENST00000266679 OR5A1Q8NGJ0 315 aa9.43□□□□□ -0.9
CPSF6-201ENST00000266679 DEFB114Q30KQ6 69 aa9.43□□□□□ -0.9
CPSF6-201ENST00000266679 ZNRF2Q8NHG8 242 aa9.43□□□□□ -0.9
CPSF6-201ENST00000266679 IGLL5B9A064 214 aa9.42□□□□□ -0.9
CPSF6-201ENST00000266679 ZNF415Q09FC8 603 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms