RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 OBSL1O75147 1896 aa13.73□□□□□ -0.21
COL5A3-201ENST00000264828 TMEM256-PLSCR3K7ERE1 68 aa13.73□□□□□ -0.21
COL5A3-201ENST00000264828 TP53TG3Q9ULZ0 132 aa13.73□□□□□ -0.21
COL5A3-201ENST00000264828 H3BT86 120 aa13.72□□□□□ -0.21
COL5A3-201ENST00000264828 SPATA12Q7Z6I5 190 aa13.72□□□□□ -0.21
COL5A3-201ENST00000264828 MED14OSP0DP75 135 aa13.72□□□□□ -0.21
COL5A3-201ENST00000264828 C10orf105Q8TEF2 133 aa13.72□□□□□ -0.21
COL5A3-201ENST00000264828 SIRPDQ9H106 197 aa13.72□□□□□ -0.21
COL5A3-201ENST00000264828 WNK2Q9Y3S1 2297 aa13.72□□□□□ -0.21
COL5A3-201ENST00000264828 FANCD2OSQ96PS1 177 aa13.71□□□□□ -0.21
COL5A3-201ENST00000264828 Q6ZSR3 168 aa13.71□□□□□ -0.21
COL5A3-201ENST00000264828 CXCL5P42830 114 aa13.71□□□□□ -0.22
COL5A3-201ENST00000264828 UPK3BQ9BT76 320 aa13.71□□□□□ -0.22
COL5A3-201ENST00000264828 C19orf71A6NCJ1 209 aa13.7□□□□□ -0.22
COL5A3-201ENST00000264828 CHD3Q12873 2000 aaKnown RBP13.7□□□□□ -0.22
COL5A3-201ENST00000264828 C4orf3Q8WVX3 66 aa13.7□□□□□ -0.22
COL5A3-201ENST00000264828 ABCA4P78363 2273 aa13.7□□□□□ -0.22
COL5A3-201ENST00000264828 COL4A3Q01955 1670 aa13.7□□□□□ -0.22
COL5A3-201ENST00000264828 KIAA1549LQ6ZVL6 1849 aa13.7□□□□□ -0.22
COL5A3-201ENST00000264828 COX7BP24311 80 aa13.7□□□□□ -0.22
COL5A3-201ENST00000264828 MIAQ16674 131 aa13.7□□□□□ -0.22
COL5A3-201ENST00000264828 C20orf203Q8NBC4 194 aa13.7□□□□□ -0.22
COL5A3-201ENST00000264828 K7EMT4 169 aa13.69□□□□□ -0.22
COL5A3-201ENST00000264828 ZNF80P51504 273 aaPredicted RBP13.69□□□□□ -0.22
COL5A3-201ENST00000264828 LYPD6Q86Y78 171 aa13.69□□□□□ -0.22
COL5A3-201ENST00000264828 TNRC6AQ8NDV7 1962 aaKnown RBP13.69□□□□□ -0.22
COL5A3-201ENST00000264828 TP73-AS1Q9UF72 201 aa13.69□□□□□ -0.22
COL5A3-201ENST00000264828 CACNA1BQ00975 2339 aa13.68□□□□□ -0.22
COL5A3-201ENST00000264828 GPHB5Q86YW7 130 aa13.68□□□□□ -0.22
COL5A3-201ENST00000264828 MPLKIPQ8TAP9 179 aa13.68□□□□□ -0.22
COL5A3-201ENST00000264828 C4orf48Q5BLP8 95 aa13.67□□□□□ -0.22
COL5A3-201ENST00000264828 LINC00322Q6ZN03 302 aaPredicted RBP13.67□□□□□ -0.22
COL5A3-201ENST00000264828 NCOR1O75376 2440 aa13.67□□□□□ -0.22
COL5A3-201ENST00000264828 IGKV4-1P06312 121 aa13.67□□□□□ -0.22
COL5A3-201ENST00000264828 SDIM1Q6ZPB5 146 aa13.67□□□□□ -0.22
COL5A3-201ENST00000264828 ADAMTS9Q9P2N4 1935 aa13.67□□□□□ -0.22
COL5A3-201ENST00000264828 A0A0J9YXY3 114 aa13.66□□□□□ -0.22
COL5A3-201ENST00000264828 IGLV1-47P01700 117 aa13.66□□□□□ -0.22
COL5A3-201ENST00000264828 SPTSSBQ8NFR3 76 aa13.66□□□□□ -0.22
COL5A3-201ENST00000264828 TRBV6-1A0A0K0K1D8 114 aa13.66□□□□□ -0.22
COL5A3-201ENST00000264828 A0A0J9YX75 114 aa13.66□□□□□ -0.22
COL5A3-201ENST00000264828 SCXQ7RTU7 201 aa13.66□□□□□ -0.22
COL5A3-201ENST00000264828 TMEM263Q8WUH6 116 aaKnown RBP13.66□□□□□ -0.22
COL5A3-201ENST00000264828 MT-ATP8P03928 68 aa13.66□□□□□ -0.22
COL5A3-201ENST00000264828 GDF5OSQ5U4N7 250 aa13.66□□□□□ -0.22
COL5A3-201ENST00000264828 TEX49A0A1B0GTD5 131 aa13.65□□□□□ -0.22
COL5A3-201ENST00000264828 IGKV1D-37A0A075B6S9 117 aa13.65□□□□□ -0.22
COL5A3-201ENST00000264828 IGKV2-24A0A0C4DH68 120 aa13.65□□□□□ -0.22
COL5A3-201ENST00000264828 ACACAQ13085 2346 aa13.65□□□□□ -0.22
COL5A3-201ENST00000264828 MAP6D1Q9H9H5 199 aa13.65□□□□□ -0.22
COL5A3-201ENST00000264828 SLPIP03973 132 aa13.64□□□□□ -0.23
COL5A3-201ENST00000264828 SEC61GP60059 68 aa13.64□□□□□ -0.23
COL5A3-201ENST00000264828 LINC00643Q86TS7 51 aa13.63□□□□□ -0.23
COL5A3-201ENST00000264828 C11orf1Q9H5F2 150 aa13.63□□□□□ -0.23
COL5A3-201ENST00000264828 LINC00269Q8N2A0 174 aa13.63□□□□□ -0.23
COL5A3-201ENST00000264828 SPRY4Q9C004 299 aa13.63□□□□□ -0.23
COL5A3-201ENST00000264828 MSMPQ1L6U9 139 aa13.63□□□□□ -0.23
COL5A3-201ENST00000264828 A0A1B0GXF2 115 aa13.62□□□□□ -0.23
COL5A3-201ENST00000264828 BPY2O14599 106 aa13.62□□□□□ -0.23
COL5A3-201ENST00000264828 CCDC140Q96MF4 163 aa13.62□□□□□ -0.23
COL5A3-201ENST00000264828 A0A096LNI7 61 aa13.62□□□□□ -0.23
COL5A3-201ENST00000264828 DAZAP2Q15038 168 aaPredicted RBP13.62□□□□□ -0.23
COL5A3-201ENST00000264828 ZFAND2AQ8N6M9 145 aa13.62□□□□□ -0.23
COL5A3-201ENST00000264828 B9D2Q9BPU9 175 aa13.62□□□□□ -0.23
COL5A3-201ENST00000264828 IGLV2-8P01709 118 aa13.61□□□□□ -0.23
COL5A3-201ENST00000264828 MYCNOSP40205 109 aa13.61□□□□□ -0.23
COL5A3-201ENST00000264828 PRO0255Q9UI72 69 aa13.61□□□□□ -0.23
COL5A3-201ENST00000264828 LINC01548A6NM66 108 aa13.61□□□□□ -0.23
COL5A3-201ENST00000264828 WISP2O76076 250 aa13.61□□□□□ -0.23
COL5A3-201ENST00000264828 NDUFV3P56181 108 aaKnown RBP13.61□□□□□ -0.23
COL5A3-201ENST00000264828 Q6ZTI0 123 aa13.61□□□□□ -0.23
COL5A3-201ENST00000264828 LINC00467Q9BRT7 94 aa13.6□□□□□ -0.23
COL5A3-201ENST00000264828 IGLC6P0CF74 106 aa13.6□□□□□ -0.23
COL5A3-201ENST00000264828 C20orf197Q8N268 126 aa13.6□□□□□ -0.23
COL5A3-201ENST00000264828 HIGD2AQ9BW72 106 aa13.6□□□□□ -0.23
COL5A3-201ENST00000264828 NACAE9PAV3 2078 aa13.6□□□□□ -0.23
COL5A3-201ENST00000264828 HIST2H2BDQ6DRA6 164 aa13.59□□□□□ -0.23
COL5A3-201ENST00000264828 MALRD1Q5VYJ5 2156 aa13.59□□□□□ -0.23
COL5A3-201ENST00000264828 A6NDX4 124 aa13.58□□□□□ -0.24
COL5A3-201ENST00000264828 ARHGAP21Q5T5U3 1957 aa13.58□□□□□ -0.24
COL5A3-201ENST00000264828 MLST8Q9BVC4 326 aa13.58□□□□□ -0.24
COL5A3-201ENST00000264828 TMEM131Q92545 1883 aa13.58□□□□□ -0.24
COL5A3-201ENST00000264828 ZNF106Q9H2Y7 1883 aaKnown RBP13.58□□□□□ -0.24
COL5A3-201ENST00000264828 REG3AQ06141 175 aa13.58□□□□□ -0.24
COL5A3-201ENST00000264828 ENHOQ6UWT2 76 aa13.58□□□□□ -0.24
COL5A3-201ENST00000264828 MED13Q9UHV7 2174 aa13.57□□□□□ -0.24
COL5A3-201ENST00000264828 CACNA1GO43497 2377 aa13.57□□□□□ -0.24
COL5A3-201ENST00000264828 IGF1P05019 195 aa13.57□□□□□ -0.24
COL5A3-201ENST00000264828 PRORYQ9H606 182 aa13.57□□□□□ -0.24
COL5A3-201ENST00000264828 SMAD5-AS1Q9Y6J3 95 aa13.57□□□□□ -0.24
COL5A3-201ENST00000264828 C20orf173Q96LM9 149 aa13.57□□□□□ -0.24
COL5A3-201ENST00000264828 Q8NA96 180 aa13.57□□□□□ -0.24
COL5A3-201ENST00000264828 NEXN-AS1Q8NBZ9 246 aa13.56□□□□□ -0.24
COL5A3-201ENST00000264828 NOTCH3Q9UM47 2321 aa13.56□□□□□ -0.24
COL5A3-201ENST00000264828 PDE6GP18545 87 aa13.56□□□□□ -0.24
COL5A3-201ENST00000264828 SPANXB1Q9NS25 103 aaPredicted RBP13.55□□□□□ -0.24
COL5A3-201ENST00000264828 TMEM89A2RUT3 159 aa13.55□□□□□ -0.24
COL5A3-201ENST00000264828 DNAJC9-AS1A6NH13 148 aa13.55□□□□□ -0.24
COL5A3-201ENST00000264828 PIK3CD-AS1Q5SR53 167 aa13.55□□□□□ -0.24
COL5A3-201ENST00000264828 TRBV10-1A0A0K0K1A3 114 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms