RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 DLEU1O43261 78 aa12.97□□□□□ -0.33
SDF4-201ENST00000263741 CEMP1Q6PRD7 247 aaPredicted RBP12.97□□□□□ -0.33
SDF4-201ENST00000263741 ZNF575Q86XF7 245 aa12.97□□□□□ -0.33
SDF4-201ENST00000263741 LINC00612Q8N6U2 182 aa12.97□□□□□ -0.33
SDF4-201ENST00000263741 TRAV10A0A0B4J240 114 aa12.97□□□□□ -0.33
SDF4-201ENST00000263741 NUPR2A6NF83 97 aa12.97□□□□□ -0.33
SDF4-201ENST00000263741 H3BVH4 76 aa12.97□□□□□ -0.33
SDF4-201ENST00000263741 RNASE3P12724 160 aaKnown RBP12.97□□□□□ -0.33
SDF4-201ENST00000263741 RIGQ13278 110 aa12.97□□□□□ -0.33
SDF4-201ENST00000263741 LINC01559Q495D7 138 aa12.97□□□□□ -0.33
SDF4-201ENST00000263741 OR5AL1P0C617 328 aa12.96□□□□□ -0.33
SDF4-201ENST00000263741 LAMTOR2Q9Y2Q5 125 aa12.96□□□□□ -0.33
SDF4-201ENST00000263741 A0A1B0GUT8 65 aa12.95□□□□□ -0.34
SDF4-201ENST00000263741 IGHV3-53P01767 116 aa12.95□□□□□ -0.34
SDF4-201ENST00000263741 ASIPP42127 132 aa12.95□□□□□ -0.34
SDF4-201ENST00000263741 ATOH7Q8N100 152 aa12.95□□□□□ -0.34
SDF4-201ENST00000263741 MRPS16Q9Y3D3 137 aaKnown RBP12.95□□□□□ -0.34
SDF4-201ENST00000263741 PLECQ15149 4684 aaKnown RBP12.95□□□□□ -0.34
SDF4-201ENST00000263741 TRGV2A0A075B6R0 118 aa12.95□□□□□ -0.34
SDF4-201ENST00000263741 S100A4P26447 101 aaKnown RBP12.95□□□□□ -0.34
SDF4-201ENST00000263741 FOXA3P55318 350 aaPredicted RBP12.95□□□□□ -0.34
SDF4-201ENST00000263741 C9orf85Q96MD7 179 aa12.95□□□□□ -0.34
SDF4-201ENST00000263741 LEPROTL1O95214 131 aa12.94□□□□□ -0.34
SDF4-201ENST00000263741 IGHV1-24A0A0C4DH33 117 aa12.93□□□□□ -0.34
SDF4-201ENST00000263741 IGLL5B9A064 214 aa12.93□□□□□ -0.34
SDF4-201ENST00000263741 LINC00614P0C842 121 aa12.93□□□□□ -0.34
SDF4-201ENST00000263741 SPXQ9BT56 116 aa12.93□□□□□ -0.34
SDF4-201ENST00000263741 M0R2P5 195 aa12.93□□□□□ -0.34
SDF4-201ENST00000263741 ATP5G1P05496 136 aa12.93□□□□□ -0.34
SDF4-201ENST00000263741 TMEM191AQ9H0A3 160 aa12.93□□□□□ -0.34
SDF4-201ENST00000263741 HSPB8Q9UJY1 196 aa12.93□□□□□ -0.34
SDF4-201ENST00000263741 HSBP1L1C9JCN9 74 aa12.92□□□□□ -0.34
SDF4-201ENST00000263741 F5H768 121 aa12.92□□□□□ -0.34
SDF4-201ENST00000263741 URB1-AS1Q96HZ7 61 aa12.92□□□□□ -0.34
SDF4-201ENST00000263741 ARMS2P0C7Q2 107 aa12.92□□□□□ -0.34
SDF4-201ENST00000263741 LGALS9BQ3B8N2 356 aa12.92□□□□□ -0.34
SDF4-201ENST00000263741 GATD1Q8NB37 220 aa12.92□□□□□ -0.34
SDF4-201ENST00000263741 MAP1LC3CQ9BXW4 147 aa12.92□□□□□ -0.34
SDF4-201ENST00000263741 ST20Q9HBF5 79 aa12.92□□□□□ -0.34
SDF4-201ENST00000263741 SYS1-DBNDD2H3BUS1 97 aa12.91□□□□□ -0.34
SDF4-201ENST00000263741 ZNF876PQ49A33 203 aa12.91□□□□□ -0.34
SDF4-201ENST00000263741 KLK5Q9Y337 293 aaPredicted RBP12.91□□□□□ -0.34
SDF4-201ENST00000263741 CHTOPQ9Y3Y2 248 aaKnown RBP12.91□□□□□ -0.34
SDF4-201ENST00000263741 LYSTQ99698 3801 aa12.91□□□□□ -0.34
SDF4-201ENST00000263741 MUC21A0A0G2JKD1 596 aa12.9□□□□□ -0.34
SDF4-201ENST00000263741 MUC21A0A140T8X8 626 aa12.9□□□□□ -0.34
SDF4-201ENST00000263741 IGHV4-4A0A075B6R2 117 aa12.9□□□□□ -0.34
SDF4-201ENST00000263741 PET117Q6UWS5 81 aa12.9□□□□□ -0.34
SDF4-201ENST00000263741 POM121L12Q8N7R1 296 aa12.9□□□□□ -0.34
SDF4-201ENST00000263741 RASL10AQ92737 203 aa12.9□□□□□ -0.34
SDF4-201ENST00000263741 ZNF479Q96JC4 524 aa12.89□□□□□ -0.35
SDF4-201ENST00000263741 M0R381 172 aa12.88□□□□□ -0.35
SDF4-201ENST00000263741 C21orf62-AS1Q17RA5 79 aa12.88□□□□□ -0.35
SDF4-201ENST00000263741 TPPP3Q9BW30 176 aa12.88□□□□□ -0.35
SDF4-201ENST00000263741 A0A0J9YY99 117 aa12.87□□□□□ -0.35
SDF4-201ENST00000263741 FA2HQ7L5A8 372 aa12.87□□□□□ -0.35
SDF4-201ENST00000263741 OR10AG1Q8NH19 301 aa12.87□□□□□ -0.35
SDF4-201ENST00000263741 C18orf15Q96N68 181 aa12.87□□□□□ -0.35
SDF4-201ENST00000263741 JPT2Q9H910 190 aa12.87□□□□□ -0.35
SDF4-201ENST00000263741 PHLDA3Q9Y5J5 127 aa12.87□□□□□ -0.35
SDF4-201ENST00000263741 STPG4Q8N801 248 aa12.87□□□□□ -0.35
SDF4-201ENST00000263741 SCRT2Q9NQ03 307 aa12.87□□□□□ -0.35
SDF4-201ENST00000263741 AP5S1Q9NUS5 200 aa12.87□□□□□ -0.35
SDF4-201ENST00000263741 CBY1Q9Y3M2 126 aa12.87□□□□□ -0.35
SDF4-201ENST00000263741 TRAV26-1A0A087WT03 109 aa12.86□□□□□ -0.35
SDF4-201ENST00000263741 ORAOV1Q8WV07 137 aa12.86□□□□□ -0.35
SDF4-201ENST00000263741 KMT2CQ8NEZ4 4911 aaKnown RBP12.85□□□□□ -0.35
SDF4-201ENST00000263741 IGHV3-73A0A0B4J1V6 119 aa12.85□□□□□ -0.35
SDF4-201ENST00000263741 NPSP0C0P6 89 aa12.85□□□□□ -0.35
SDF4-201ENST00000263741 HINT1P49773 126 aaPredicted RBP12.85□□□□□ -0.35
SDF4-201ENST00000263741 RPS20P60866 119 aaKnown RBP12.85□□□□□ -0.35
SDF4-201ENST00000263741 OR4C5Q8NGB2 326 aa12.85□□□□□ -0.35
SDF4-201ENST00000263741 APLNQ9ULZ1 77 aa12.85□□□□□ -0.35
SDF4-201ENST00000263741 SPATA12Q7Z6I5 190 aa12.85□□□□□ -0.35
SDF4-201ENST00000263741 TRAV4A0A0B4J268 109 aa12.84□□□□□ -0.35
SDF4-201ENST00000263741 CFAP126Q5VTH2 177 aa12.84□□□□□ -0.35
SDF4-201ENST00000263741 PRSS3P2Q8NHM4 247 aa12.84□□□□□ -0.35
SDF4-201ENST00000263741 FHL2Q14192 279 aa12.84□□□□□ -0.35
SDF4-201ENST00000263741 SLC25A34Q6PIV7 304 aa12.84□□□□□ -0.35
SDF4-201ENST00000263741 FER1L6-AS1Q8NA97 138 aa12.84□□□□□ -0.35
SDF4-201ENST00000263741 TRGV4A0A0C4DH28 118 aa12.83□□□□□ -0.36
SDF4-201ENST00000263741 IGLC6P0CF74 106 aa12.83□□□□□ -0.36
SDF4-201ENST00000263741 RS1O15537 224 aa12.82□□□□□ -0.36
SDF4-201ENST00000263741 SNAI2O43623 268 aa12.82□□□□□ -0.36
SDF4-201ENST00000263741 MED14OSP0DP75 135 aa12.82□□□□□ -0.36
SDF4-201ENST00000263741 LINC00173Q6ZV60 143 aa12.82□□□□□ -0.36
SDF4-201ENST00000263741 SYT8Q8NBV8 401 aa12.82□□□□□ -0.36
SDF4-201ENST00000263741 ALMS1Q8TCU4 4167 aa12.82□□□□□ -0.36
SDF4-201ENST00000263741 COTL1Q14019 142 aa12.82□□□□□ -0.36
SDF4-201ENST00000263741 VSIG2Q96IQ7 327 aa12.82□□□□□ -0.36
SDF4-201ENST00000263741 A0A087WWL8 130 aa12.81□□□□□ -0.36
SDF4-201ENST00000263741 NUDT3O95989 172 aa12.81□□□□□ -0.36
SDF4-201ENST00000263741 PCP4P48539 62 aa12.81□□□□□ -0.36
SDF4-201ENST00000263741 FAM74A4Q5TZK3 123 aa12.81□□□□□ -0.36
SDF4-201ENST00000263741 PTH2Q96A98 100 aa12.81□□□□□ -0.36
SDF4-201ENST00000263741 SPANXN1Q5VSR9 72 aa12.81□□□□□ -0.36
SDF4-201ENST00000263741 LINC01545Q5VT33 79 aa12.81□□□□□ -0.36
SDF4-201ENST00000263741 COX11Q9Y6N1 276 aa12.81□□□□□ -0.36
SDF4-201ENST00000263741 LYZL1Q6UWQ5 148 aa12.8□□□□□ -0.36
SDF4-201ENST00000263741 ORMDL3Q8N138 153 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms