RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 DEFB112Q30KQ8 113 aa6.79□□□□□ -1.32
MSH4-201ENST00000263187 ZNF876PQ49A33 203 aa6.79□□□□□ -1.32
MSH4-201ENST00000263187 C10orf105Q8TEF2 133 aa6.79□□□□□ -1.32
MSH4-201ENST00000263187 DCANP1Q8TF63 244 aa6.79□□□□□ -1.32
MSH4-201ENST00000263187 F8W1H4 67 aa6.79□□□□□ -1.32
MSH4-201ENST00000263187 BEX4Q9NWD9 120 aaPredicted RBP6.79□□□□□ -1.32
MSH4-201ENST00000263187 TRAV2A0A0B4J234 112 aa6.78□□□□□ -1.32
MSH4-201ENST00000263187 IGIPA6NJ69 53 aa6.78□□□□□ -1.32
MSH4-201ENST00000263187 ID1P41134 155 aa6.78□□□□□ -1.32
MSH4-201ENST00000263187 PMVKQ15126 192 aa6.78□□□□□ -1.32
MSH4-201ENST00000263187 C18orf65Q6ZTR6 163 aa6.78□□□□□ -1.32
MSH4-201ENST00000263187 FAM19A4Q96LR4 140 aa6.78□□□□□ -1.32
MSH4-201ENST00000263187 SIGMAR1Q99720 223 aa6.78□□□□□ -1.32
MSH4-201ENST00000263187 ACANP16112 2415 aa6.78□□□□□ -1.32
MSH4-201ENST00000263187 VCYO14598 125 aa6.78□□□□□ -1.32
MSH4-201ENST00000263187 KLLNB2CW77 178 aa6.77□□□□□ -1.33
MSH4-201ENST00000263187 COX6B1P14854 86 aa6.77□□□□□ -1.33
MSH4-201ENST00000263187 POLR2KP53803 58 aaKnown RBP6.77□□□□□ -1.33
MSH4-201ENST00000263187 TAL2Q16559 108 aa6.77□□□□□ -1.33
MSH4-201ENST00000263187 KLK9Q2XQG4 91 aa6.77□□□□□ -1.33
MSH4-201ENST00000263187 A0A0J9YXV3 536 aa6.77□□□□□ -1.33
MSH4-201ENST00000263187 A0A0J9YY99 117 aa6.77□□□□□ -1.33
MSH4-201ENST00000263187 A8MZ25 164 aa6.77□□□□□ -1.33
MSH4-201ENST00000263187 SMCPP49901 116 aaPredicted RBP6.77□□□□□ -1.33
MSH4-201ENST00000263187 KHDC1LQ5JSQ8 128 aa6.77□□□□□ -1.33
MSH4-201ENST00000263187 SPXQ9BT56 116 aa6.77□□□□□ -1.33
MSH4-201ENST00000263187 IGLV1-40P01703 118 aa6.77□□□□□ -1.33
MSH4-201ENST00000263187 HERVK_113P61574 105 aa6.77□□□□□ -1.33
MSH4-201ENST00000263187 NFE4Q86UQ8 179 aa6.77□□□□□ -1.33
MSH4-201ENST00000263187 PRO0461Q9UI25 63 aa6.77□□□□□ -1.33
MSH4-201ENST00000263187 TENM4Q6N022 2769 aa6.77□□□□□ -1.33
MSH4-201ENST00000263187 IGHV3-16A0A0C4DH30 117 aa6.76□□□□□ -1.33
MSH4-201ENST00000263187 IGHV3-38A0A0C4DH36 116 aa6.76□□□□□ -1.33
MSH4-201ENST00000263187 NDUFS8O00217 210 aa6.76□□□□□ -1.33
MSH4-201ENST00000263187 LGALS3P17931 250 aaKnown RBP6.76□□□□□ -1.33
MSH4-201ENST00000263187 SYT8Q8NBV8 401 aa6.76□□□□□ -1.33
MSH4-201ENST00000263187 J3QQQ9 107 aa6.76□□□□□ -1.33
MSH4-201ENST00000263187 CFC1BP0CG36 223 aa6.76□□□□□ -1.33
MSH4-201ENST00000263187 CFC1P0CG37 223 aa6.76□□□□□ -1.33
MSH4-201ENST00000263187 IGHV4OR15-8A0A075B7B6 117 aa6.75□□□□□ -1.33
MSH4-201ENST00000263187 A0A087WW49 117 aa6.75□□□□□ -1.33
MSH4-201ENST00000263187 TCL1BO95988 128 aa6.75□□□□□ -1.33
MSH4-201ENST00000263187 PRSS2P07478 247 aa6.75□□□□□ -1.33
MSH4-201ENST00000263187 SNRPD3P62318 126 aaKnown RBP6.75□□□□□ -1.33
MSH4-201ENST00000263187 Q5PR19 223 aa6.75□□□□□ -1.33
MSH4-201ENST00000263187 TRPT1Q86TN4 253 aaKnown RBP6.75□□□□□ -1.33
MSH4-201ENST00000263187 NDUFA11Q86Y39 141 aa6.75□□□□□ -1.33
MSH4-201ENST00000263187 C11orf44Q8N8P7 122 aa6.75□□□□□ -1.33
MSH4-201ENST00000263187 TRAV8-3A0A0A6YYJ7 113 aa6.75□□□□□ -1.33
MSH4-201ENST00000263187 J3QR89 54 aa6.75□□□□□ -1.33
MSH4-201ENST00000263187 M0QY20 66 aa6.75□□□□□ -1.33
MSH4-201ENST00000263187 Q1RN00 199 aa6.75□□□□□ -1.33
MSH4-201ENST00000263187 DLX4Q92988 240 aaPredicted RBP6.75□□□□□ -1.33
MSH4-201ENST00000263187 A0A0J9YX75 114 aa6.75□□□□□ -1.33
MSH4-201ENST00000263187 A6NJY4 79 aa6.75□□□□□ -1.33
MSH4-201ENST00000263187 IGHV1OR15-1A0A075B7D0 117 aa6.74□□□□□ -1.33
MSH4-201ENST00000263187 A4D1N5 150 aa6.74□□□□□ -1.33
MSH4-201ENST00000263187 RBMY1A1P0DJD3 496 aaKnown RBP6.74□□□□□ -1.33
MSH4-201ENST00000263187 RBMY1CP0DJD4 496 aa6.74□□□□□ -1.33
MSH4-201ENST00000263187 CRIP2P52943 208 aaPredicted RBP6.74□□□□□ -1.33
MSH4-201ENST00000263187 SLURP1P55000 103 aa6.74□□□□□ -1.33
MSH4-201ENST00000263187 RBMY1FQ15415 496 aaKnown RBP6.74□□□□□ -1.33
MSH4-201ENST00000263187 IGHV3OR16-12A0A075B7B8 117 aa6.74□□□□□ -1.33
MSH4-201ENST00000263187 PPP1R17O96001 155 aa6.74□□□□□ -1.33
MSH4-201ENST00000263187 PSMB8P28062 276 aa6.74□□□□□ -1.33
MSH4-201ENST00000263187 Q6ZSV7 163 aa6.74□□□□□ -1.33
MSH4-201ENST00000263187 FN1P02751 2386 aaKnown RBP6.74□□□□□ -1.33
MSH4-201ENST00000263187 IGHV3-30P01768 117 aa6.74□□□□□ -1.33
MSH4-201ENST00000263187 IGHV3-30-5P0DP03 117 aa6.74□□□□□ -1.33
MSH4-201ENST00000263187 DEFB131AP59861 70 aa6.74□□□□□ -1.33
MSH4-201ENST00000263187 VCX2Q9H322 139 aa6.74□□□□□ -1.33
MSH4-201ENST00000263187 NBEAL2Q6ZNJ1 2754 aa6.73□□□□□ -1.33
MSH4-201ENST00000263187 A0A0U1RRA0 63 aa6.73□□□□□ -1.33
MSH4-201ENST00000263187 HOXD3P31249 432 aaPredicted RBP6.73□□□□□ -1.33
MSH4-201ENST00000263187 UBE2D1P51668 147 aa6.73□□□□□ -1.33
MSH4-201ENST00000263187 FOXI1Q12951 378 aa6.73□□□□□ -1.33
MSH4-201ENST00000263187 FHL3Q13643 280 aa6.73□□□□□ -1.33
MSH4-201ENST00000263187 CFAP126Q5VTH2 177 aa6.73□□□□□ -1.33
MSH4-201ENST00000263187 B4DSR2 109 aa6.73□□□□□ -1.33
MSH4-201ENST00000263187 PLA2G2AP14555 144 aa6.73□□□□□ -1.33
MSH4-201ENST00000263187 APRG1Q8IVJ8 170 aa6.73□□□□□ -1.33
MSH4-201ENST00000263187 MUSTN1Q8IVN3 82 aa6.73□□□□□ -1.33
MSH4-201ENST00000263187 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.72□□□□□ -1.33
MSH4-201ENST00000263187 TRBV27A0A0K0K1C4 114 aa6.72□□□□□ -1.33
MSH4-201ENST00000263187 IGKV2-29A2NJV5 120 aaPredicted RBP6.72□□□□□ -1.33
MSH4-201ENST00000263187 ELANEP08246 267 aa6.72□□□□□ -1.33
MSH4-201ENST00000263187 DAND5Q8N907 189 aa6.72□□□□□ -1.33
MSH4-201ENST00000263187 EIF4EBP3O60516 100 aaPredicted RBP6.72□□□□□ -1.33
MSH4-201ENST00000263187 NXPH4O95158 308 aa6.72□□□□□ -1.33
MSH4-201ENST00000263187 MED14OSP0DP75 135 aa6.72□□□□□ -1.33
MSH4-201ENST00000263187 CD28P10747 220 aa6.72□□□□□ -1.33
MSH4-201ENST00000263187 CFHR3Q02985 330 aa6.72□□□□□ -1.33
MSH4-201ENST00000263187 TCTEX1D4Q5JR98 221 aa6.72□□□□□ -1.33
MSH4-201ENST00000263187 Q6ZSN1 163 aa6.72□□□□□ -1.33
MSH4-201ENST00000263187 LGALS9O00182 355 aa6.72□□□□□ -1.33
MSH4-201ENST00000263187 MT-ATP8P03928 68 aa6.72□□□□□ -1.33
MSH4-201ENST00000263187 SLC25A29Q8N8R3 303 aa6.72□□□□□ -1.33
MSH4-201ENST00000263187 TMEM141Q96I45 108 aa6.72□□□□□ -1.33
MSH4-201ENST00000263187 SETXQ7Z333 2677 aaKnown RBP6.72□□□□□ -1.33
MSH4-201ENST00000263187 C9JAW5 83 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms