RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 RPL39LQ96EH5 51 aaKnown RBP10.97□□□□□ -0.65
GYPC-201ENST00000259254 TRAV26-1A0A087WT03 109 aa10.96□□□□□ -0.65
GYPC-201ENST00000259254 GAGE12JA6NER3 117 aa10.96□□□□□ -0.65
GYPC-201ENST00000259254 PPP1R17O96001 155 aa10.96□□□□□ -0.65
GYPC-201ENST00000259254 GAGE1Q13065 139 aa10.96□□□□□ -0.65
GYPC-201ENST00000259254 GAGE4Q13068 117 aa10.96□□□□□ -0.65
GYPC-201ENST00000259254 GAGE5Q13069 117 aa10.96□□□□□ -0.65
GYPC-201ENST00000259254 GAGE13Q4V321 117 aa10.96□□□□□ -0.65
GYPC-201ENST00000259254 ALKBH7Q9BT30 221 aaPredicted RBP10.96□□□□□ -0.65
GYPC-201ENST00000259254 NIT2Q9NQR4 276 aa10.96□□□□□ -0.65
GYPC-201ENST00000259254 TNFRSF18Q9Y5U5 241 aa10.96□□□□□ -0.65
GYPC-201ENST00000259254 RYR3Q15413 4870 aa10.96□□□□□ -0.66
GYPC-201ENST00000259254 TRBV10-1A0A0K0K1A3 114 aa10.95□□□□□ -0.66
GYPC-201ENST00000259254 LOC100131303A0A0U1RQF7 123 aa10.95□□□□□ -0.66
GYPC-201ENST00000259254 C1orf196B1AJZ1 125 aa10.95□□□□□ -0.66
GYPC-201ENST00000259254 TNFRSF6BO95407 300 aa10.95□□□□□ -0.66
GYPC-201ENST00000259254 NPYP01303 97 aa10.95□□□□□ -0.66
GYPC-201ENST00000259254 RPL36AP83881 106 aaKnown RBP10.95□□□□□ -0.66
GYPC-201ENST00000259254 RPL36ALQ969Q0 106 aaKnown RBP10.95□□□□□ -0.66
GYPC-201ENST00000259254 ST20Q9HBF5 79 aa10.95□□□□□ -0.66
GYPC-201ENST00000259254 GYPEP15421 78 aa10.94□□□□□ -0.66
GYPC-201ENST00000259254 CASC10Q5T4H9 136 aa10.94□□□□□ -0.66
GYPC-201ENST00000259254 NRACQ8N912 160 aa10.94□□□□□ -0.66
GYPC-201ENST00000259254 NEXN-AS1Q8NBZ9 246 aa10.94□□□□□ -0.66
GYPC-201ENST00000259254 ZNRF2Q8NHG8 242 aa10.94□□□□□ -0.66
GYPC-201ENST00000259254 PHLDA1Q8WV24 401 aaPredicted RBP10.94□□□□□ -0.66
GYPC-201ENST00000259254 DNAJC30Q96LL9 226 aa10.94□□□□□ -0.66
GYPC-201ENST00000259254 LAMTOR2Q9Y2Q5 125 aa10.94□□□□□ -0.66
GYPC-201ENST00000259254 VSIG2Q96IQ7 327 aa10.93□□□□□ -0.66
GYPC-201ENST00000259254 MAP1LC3AQ9H492 121 aa10.93□□□□□ -0.66
GYPC-201ENST00000259254 Q9UF83 564 aa10.93□□□□□ -0.66
GYPC-201ENST00000259254 LOC389332A0A1B0GUA5 103 aa10.92□□□□□ -0.66
GYPC-201ENST00000259254 PHOX2AO14813 284 aa10.92□□□□□ -0.66
GYPC-201ENST00000259254 TRBV7-3A0A075B6L6 115 aa10.91□□□□□ -0.66
GYPC-201ENST00000259254 TRBV6-5A0A0K0K1A5 114 aa10.91□□□□□ -0.66
GYPC-201ENST00000259254 SDHAF1A6NFY7 115 aa10.91□□□□□ -0.66
GYPC-201ENST00000259254 RAB5BP61020 215 aa10.91□□□□□ -0.66
GYPC-201ENST00000259254 SUMO2P61956 95 aaKnown RBP10.91□□□□□ -0.66
GYPC-201ENST00000259254 IQCJQ1A5X6 159 aa10.91□□□□□ -0.66
GYPC-201ENST00000259254 C20orf78Q9BR46 151 aa10.91□□□□□ -0.66
GYPC-201ENST00000259254 ICOSQ9Y6W8 199 aa10.91□□□□□ -0.66
GYPC-201ENST00000259254 NUDT3O95989 172 aa10.9□□□□□ -0.66
GYPC-201ENST00000259254 NEGR1Q7Z3B1 354 aa10.9□□□□□ -0.66
GYPC-201ENST00000259254 STARD9Q9P2P6 4700 aa10.89□□□□□ -0.67
GYPC-201ENST00000259254 A0A096LPF7 62 aa10.89□□□□□ -0.67
GYPC-201ENST00000259254 IGHV3-38A0A0C4DH36 116 aa10.89□□□□□ -0.67
GYPC-201ENST00000259254 IGLL5B9A064 214 aa10.89□□□□□ -0.67
GYPC-201ENST00000259254 PMCHP20382 165 aa10.89□□□□□ -0.67
GYPC-201ENST00000259254 MRPL23Q16540 153 aaKnown RBP10.89□□□□□ -0.67
GYPC-201ENST00000259254 PRSS3P2Q8NHM4 247 aa10.89□□□□□ -0.67
GYPC-201ENST00000259254 C18orf32Q8TCD1 76 aa10.89□□□□□ -0.67
GYPC-201ENST00000259254 TMEM70Q9BUB7 260 aa10.89□□□□□ -0.67
GYPC-201ENST00000259254 SMIM2Q9BVW6 85 aa10.89□□□□□ -0.67
GYPC-201ENST00000259254 H3BNG1 76 aa10.88□□□□□ -0.67
GYPC-201ENST00000259254 VCYO14598 125 aa10.88□□□□□ -0.67
GYPC-201ENST00000259254 HIST1H2BKO60814 126 aa10.88□□□□□ -0.67
GYPC-201ENST00000259254 HIST1H2BJP06899 126 aa10.88□□□□□ -0.67
GYPC-201ENST00000259254 HIST1H2BOP23527 126 aa10.88□□□□□ -0.67
GYPC-201ENST00000259254 HIST1H2BBP33778 126 aa10.88□□□□□ -0.67
GYPC-201ENST00000259254 HIST1H2BDP58876 126 aa10.88□□□□□ -0.67
GYPC-201ENST00000259254 UBE2D3P61077 147 aa10.88□□□□□ -0.67
GYPC-201ENST00000259254 HIST1H2BCP62807 126 aa10.88□□□□□ -0.67
GYPC-201ENST00000259254 UBE2D2P62837 147 aa10.88□□□□□ -0.67
GYPC-201ENST00000259254 HIST2H2BEQ16778 126 aa10.88□□□□□ -0.67
GYPC-201ENST00000259254 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.88□□□□□ -0.67
GYPC-201ENST00000259254 BAGE3Q86Y29 109 aa10.88□□□□□ -0.67
GYPC-201ENST00000259254 DEFB104AQ8WTQ1 72 aa10.88□□□□□ -0.67
GYPC-201ENST00000259254 HIST1H2BHQ93079 126 aa10.88□□□□□ -0.67
GYPC-201ENST00000259254 HIST1H2BNQ99877 126 aa10.88□□□□□ -0.67
GYPC-201ENST00000259254 HIST1H2BMQ99879 126 aa10.88□□□□□ -0.67
GYPC-201ENST00000259254 DYNC2H1Q8NCM8 4307 aaKnown RBP10.88□□□□□ -0.67
GYPC-201ENST00000259254 NUPR2A6NF83 97 aa10.87□□□□□ -0.67
GYPC-201ENST00000259254 ZFAND6Q6FIF0 208 aa10.87□□□□□ -0.67
GYPC-201ENST00000259254 CEMP1Q6PRD7 247 aaPredicted RBP10.87□□□□□ -0.67
GYPC-201ENST00000259254 FA2HQ7L5A8 372 aa10.87□□□□□ -0.67
GYPC-201ENST00000259254 ATP6V0E2Q8NHE4 81 aa10.87□□□□□ -0.67
GYPC-201ENST00000259254 CSMD3Q7Z407 3707 aa10.87□□□□□ -0.67
GYPC-201ENST00000259254 I3L3M4 83 aa10.86□□□□□ -0.67
GYPC-201ENST00000259254 FCER1GP30273 86 aa10.86□□□□□ -0.67
GYPC-201ENST00000259254 IFI27P40305 119 aaPredicted RBP10.86□□□□□ -0.67
GYPC-201ENST00000259254 POLR2KP53803 58 aaKnown RBP10.86□□□□□ -0.67
GYPC-201ENST00000259254 RNASEKQ6P5S7 137 aaKnown RBP10.86□□□□□ -0.67
GYPC-201ENST00000259254 DAZ4Q86SG3 579 aaKnown RBP10.86□□□□□ -0.67
GYPC-201ENST00000259254 Q8N8P6 123 aa10.86□□□□□ -0.67
GYPC-201ENST00000259254 KIR2DL4Q99706 377 aa10.86□□□□□ -0.67
GYPC-201ENST00000259254 NXT2Q9NPJ8 142 aaKnown RBP10.86□□□□□ -0.67
GYPC-201ENST00000259254 DAZ3Q9NR90 486 aaKnown RBP10.86□□□□□ -0.67
GYPC-201ENST00000259254 KLK5Q9Y337 293 aaPredicted RBP10.86□□□□□ -0.67
GYPC-201ENST00000259254 TRBV27A0A0K0K1C4 114 aa10.85□□□□□ -0.67
GYPC-201ENST00000259254 LINC00694P0DN24 101 aa10.85□□□□□ -0.67
GYPC-201ENST00000259254 RPL32P62910 135 aaKnown RBP10.85□□□□□ -0.67
GYPC-201ENST00000259254 Q0VG73 95 aa10.85□□□□□ -0.67
GYPC-201ENST00000259254 COTL1Q14019 142 aa10.85□□□□□ -0.67
GYPC-201ENST00000259254 SH2D6Q7Z4S9 175 aa10.85□□□□□ -0.67
GYPC-201ENST00000259254 C15orf53Q8NAA6 179 aa10.85□□□□□ -0.67
GYPC-201ENST00000259254 PRSS47A8MTI9 375 aa10.84□□□□□ -0.67
GYPC-201ENST00000259254 TCAPO15273 167 aa10.84□□□□□ -0.67
GYPC-201ENST00000259254 NDUFA6P56556 154 aa10.84□□□□□ -0.67
GYPC-201ENST00000259254 TMA7Q9Y2S6 64 aaKnown RBP10.84□□□□□ -0.67
GYPC-201ENST00000259254 NACAE9PAV3 2078 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms