RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 FAM231CP0DMU5 169 aa3.5□□□□□ -1.85
VPS13C-201ENST00000249837 SRSF2Q01130 221 aaKnown RBP3.5□□□□□ -1.85
VPS13C-201ENST00000249837 TEN1Q86WV5 123 aa3.5□□□□□ -1.85
VPS13C-201ENST00000249837 RHODO00212 210 aa3.5□□□□□ -1.85
VPS13C-201ENST00000249837 CDSNQ15517 529 aa3.5□□□□□ -1.85
VPS13C-201ENST00000249837 ZFAND2AQ8N6M9 145 aa3.5□□□□□ -1.85
VPS13C-201ENST00000249837 LINC01619G3V211 115 aa3.5□□□□□ -1.85
VPS13C-201ENST00000249837 C6orf226Q5I0X4 101 aa3.5□□□□□ -1.85
VPS13C-201ENST00000249837 APRG1Q8IVJ8 170 aa3.5□□□□□ -1.85
VPS13C-201ENST00000249837 B5MCH6 92 aa3.5□□□□□ -1.85
VPS13C-201ENST00000249837 TNFRSF13BO14836 293 aaPredicted RBP3.5□□□□□ -1.85
VPS13C-201ENST00000249837 GAGE7O76087 117 aa3.5□□□□□ -1.85
VPS13C-201ENST00000249837 GAGE12FP0CL80 117 aa3.5□□□□□ -1.85
VPS13C-201ENST00000249837 GAGE12GP0CL81 117 aa3.5□□□□□ -1.85
VPS13C-201ENST00000249837 GAGE12IP0CL82 117 aa3.5□□□□□ -1.85
VPS13C-201ENST00000249837 CEMP1Q6PRD7 247 aaPredicted RBP3.5□□□□□ -1.85
VPS13C-201ENST00000249837 SIRPDQ9H106 197 aa3.5□□□□□ -1.85
VPS13C-201ENST00000249837 Q8N1Y9 231 aa3.49□□□□□ -1.85
VPS13C-201ENST00000249837 TMEM243Q9BU79 118 aa3.49□□□□□ -1.85
VPS13C-201ENST00000249837 IGHV4OR15-8A0A075B7B6 117 aa3.49□□□□□ -1.85
VPS13C-201ENST00000249837 A0A087WW49 117 aa3.49□□□□□ -1.85
VPS13C-201ENST00000249837 PF4P02776 101 aa3.49□□□□□ -1.85
VPS13C-201ENST00000249837 PFN2P35080 140 aa3.49□□□□□ -1.85
VPS13C-201ENST00000249837 C5orf42Q9H799 3197 aa3.49□□□□□ -1.85
VPS13C-201ENST00000249837 A6NDX4 124 aa3.49□□□□□ -1.85
VPS13C-201ENST00000249837 NBL1P41271 181 aa3.49□□□□□ -1.85
VPS13C-201ENST00000249837 FBXL19-AS1Q494R0 122 aa3.49□□□□□ -1.85
VPS13C-201ENST00000249837 FOXI1Q12951 378 aa3.49□□□□□ -1.85
VPS13C-201ENST00000249837 TMEM86BQ8N661 226 aa3.49□□□□□ -1.85
VPS13C-201ENST00000249837 HIST2H2BDQ6DRA6 164 aa3.49□□□□□ -1.85
VPS13C-201ENST00000249837 SS18L2Q9UHA2 77 aa3.49□□□□□ -1.85
VPS13C-201ENST00000249837 C19orf84I3L1E1 186 aa3.49□□□□□ -1.85
VPS13C-201ENST00000249837 MT-ATP8P03928 68 aa3.49□□□□□ -1.85
VPS13C-201ENST00000249837 PIFOQ8TCI5 191 aa3.49□□□□□ -1.85
VPS13C-201ENST00000249837 TM2D2Q9BX73 214 aa3.49□□□□□ -1.85
VPS13C-201ENST00000249837 SPANXA1Q9NS26 97 aa3.49□□□□□ -1.85
VPS13C-201ENST00000249837 MRPS12O15235 138 aaKnown RBP3.48□□□□□ -1.85
VPS13C-201ENST00000249837 ANKRD29Q8N6D5 301 aa3.48□□□□□ -1.85
VPS13C-201ENST00000249837 H3BUA1 57 aa3.48□□□□□ -1.85
VPS13C-201ENST00000249837 PRM2P04554 102 aa3.48□□□□□ -1.85
VPS13C-201ENST00000249837 CARD19Q96LW7 228 aa3.48□□□□□ -1.85
VPS13C-201ENST00000249837 RBMY1BA6NDE4 496 aaKnown RBP3.48□□□□□ -1.85
VPS13C-201ENST00000249837 RBMY1EA6NEQ0 496 aaKnown RBP3.48□□□□□ -1.85
VPS13C-201ENST00000249837 RBMY1DP0C7P1 496 aaKnown RBP3.48□□□□□ -1.85
VPS13C-201ENST00000249837 BAALC-AS2P0C853 105 aa3.48□□□□□ -1.85
VPS13C-201ENST00000249837 RBMY1A1P0DJD3 496 aaKnown RBP3.48□□□□□ -1.85
VPS13C-201ENST00000249837 RBMY1CP0DJD4 496 aa3.48□□□□□ -1.85
VPS13C-201ENST00000249837 IGHV3-30-3P0DP02 117 aa3.48□□□□□ -1.85
VPS13C-201ENST00000249837 C5orf38Q86SI9 138 aa3.48□□□□□ -1.85
VPS13C-201ENST00000249837 TCL1BO95988 128 aa3.48□□□□□ -1.85
VPS13C-201ENST00000249837 MALP21145 153 aa3.48□□□□□ -1.85
VPS13C-201ENST00000249837 CLEC2BQ92478 149 aa3.48□□□□□ -1.85
VPS13C-201ENST00000249837 Q9H8V8 135 aa3.48□□□□□ -1.85
VPS13C-201ENST00000249837 TINCRA0A1B0GVN0 87 aa3.48□□□□□ -1.85
VPS13C-201ENST00000249837 Q6ZUT4 128 aa3.48□□□□□ -1.85
VPS13C-201ENST00000249837 MRGPRG-AS1Q2M3A8 158 aa3.48□□□□□ -1.85
VPS13C-201ENST00000249837 EBI3Q14213 229 aa3.48□□□□□ -1.85
VPS13C-201ENST00000249837 TRBV7-3A0A075B6L6 115 aa3.48□□□□□ -1.85
VPS13C-201ENST00000249837 TRAV26-1A0A087WT03 109 aa3.48□□□□□ -1.85
VPS13C-201ENST00000249837 A0A096LNJ9 63 aa3.48□□□□□ -1.85
VPS13C-201ENST00000249837 A0A0J9YX75 114 aa3.48□□□□□ -1.85
VPS13C-201ENST00000249837 CLPSL2Q6UWE3 100 aa3.48□□□□□ -1.85
VPS13C-201ENST00000249837 Q8N6K4 173 aa3.48□□□□□ -1.85
VPS13C-201ENST00000249837 C11orf71Q6IPW1 123 aa3.47□□□□□ -1.85
VPS13C-201ENST00000249837 HIST1H4AP62805 103 aaKnown RBP3.47□□□□□ -1.85
VPS13C-201ENST00000249837 LINC01620Q4KN68 170 aa3.47□□□□□ -1.85
VPS13C-201ENST00000249837 MAST4O15021 2626 aa3.47□□□□□ -1.85
VPS13C-201ENST00000249837 ELANEP08246 267 aa3.47□□□□□ -1.85
VPS13C-201ENST00000249837 GPHB5Q86YW7 130 aa3.47□□□□□ -1.85
VPS13C-201ENST00000249837 C10orf105Q8TEF2 133 aa3.47□□□□□ -1.85
VPS13C-201ENST00000249837 C9orf153Q5TBE3 101 aa3.47□□□□□ -1.85
VPS13C-201ENST00000249837 EDA2RQ9HAV5 297 aa3.47□□□□□ -1.85
VPS13C-201ENST00000249837 C20orf203Q8NBC4 194 aa3.47□□□□□ -1.85
VPS13C-201ENST00000249837 IFITM1P13164 125 aa3.47□□□□□ -1.85
VPS13C-201ENST00000249837 C10orf99Q6UWK7 81 aa3.47□□□□□ -1.85
VPS13C-201ENST00000249837 NOP10Q9NPE3 64 aaKnown RBP3.47□□□□□ -1.85
VPS13C-201ENST00000249837 FLNAP21333 2647 aaKnown RBP3.47□□□□□ -1.85
VPS13C-201ENST00000249837 K7EMT4 169 aa3.46□□□□□ -1.85
VPS13C-201ENST00000249837 NDUFA11Q86Y39 141 aa3.46□□□□□ -1.85
VPS13C-201ENST00000249837 CRYBA4P53673 196 aa3.46□□□□□ -1.85
VPS13C-201ENST00000249837 EDN2P20800 178 aa3.46□□□□□ -1.86
VPS13C-201ENST00000249837 CMC4P56277 68 aaPredicted RBP3.46□□□□□ -1.86
VPS13C-201ENST00000249837 A0A0J9YXY3 114 aa3.46□□□□□ -1.86
VPS13C-201ENST00000249837 F8W735 103 aaPredicted RBP3.46□□□□□ -1.86
VPS13C-201ENST00000249837 Q6ZS46 218 aa3.46□□□□□ -1.86
VPS13C-201ENST00000249837 NEXN-AS1Q8NBZ9 246 aa3.46□□□□□ -1.86
VPS13C-201ENST00000249837 RNF183Q96D59 192 aa3.46□□□□□ -1.86
VPS13C-201ENST00000249837 HHLA3Q9XRX5 114 aa3.46□□□□□ -1.86
VPS13C-201ENST00000249837 MED14OSP0DP75 135 aa3.46□□□□□ -1.86
VPS13C-201ENST00000249837 A0A0J9YY99 117 aa3.46□□□□□ -1.86
VPS13C-201ENST00000249837 IGHG2P01859 326 aa3.46□□□□□ -1.86
VPS13C-201ENST00000249837 GATA3P23771 443 aa3.46□□□□□ -1.86
VPS13C-201ENST00000249837 TIMM17AQ99595 171 aa3.46□□□□□ -1.86
VPS13C-201ENST00000249837 LINC00467Q9BRT7 94 aa3.46□□□□□ -1.86
VPS13C-201ENST00000249837 K7EQG2 157 aa3.46□□□□□ -1.86
VPS13C-201ENST00000249837 S100A7L2Q5SY68 101 aa3.46□□□□□ -1.86
VPS13C-201ENST00000249837 ICOSQ9Y6W8 199 aa3.46□□□□□ -1.86
VPS13C-201ENST00000249837 CLPSL1A2RUU4 121 aa3.46□□□□□ -1.86
VPS13C-201ENST00000249837 INSL3P51460 131 aa3.46□□□□□ -1.86
VPS13C-201ENST00000249837 HECTD1Q9ULT8 2610 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms