RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 CYSLTR1Q9Y271 337 aa16.73■□□□□ 0.27
HOXD9-201ENST00000249499 PLNP26678 52 aa16.72■□□□□ 0.27
HOXD9-201ENST00000249499 LINC01587Q99440 93 aa16.72■□□□□ 0.27
HOXD9-201ENST00000249499 IGLV1-51P01701 117 aa16.71■□□□□ 0.27
HOXD9-201ENST00000249499 NDUFA11Q86Y39 141 aa16.71■□□□□ 0.27
HOXD9-201ENST00000249499 SIVA1O15304 175 aa16.71■□□□□ 0.27
HOXD9-201ENST00000249499 SAP30O75446 220 aa16.71■□□□□ 0.27
HOXD9-201ENST00000249499 RIPPLY3P57055 190 aa16.71■□□□□ 0.27
HOXD9-201ENST00000249499 ZFP2Q6ZN57 461 aa16.71■□□□□ 0.27
HOXD9-201ENST00000249499 F8VRH5 84 aa16.7■□□□□ 0.26
HOXD9-201ENST00000249499 NEXN-AS1Q8NBZ9 246 aa16.7■□□□□ 0.26
HOXD9-201ENST00000249499 MRPL35Q9NZE8 188 aaKnown RBP16.7■□□□□ 0.26
HOXD9-201ENST00000249499 TP73-AS1Q9UF72 201 aa16.7■□□□□ 0.26
HOXD9-201ENST00000249499 RHOHQ15669 191 aa16.69■□□□□ 0.26
HOXD9-201ENST00000249499 MORN3Q6PF18 240 aaPredicted RBP16.69■□□□□ 0.26
HOXD9-201ENST00000249499 C11orf72Q8NBR9 251 aa16.69■□□□□ 0.26
HOXD9-201ENST00000249499 INAFM1C9JVW0 142 aa16.69■□□□□ 0.26
HOXD9-201ENST00000249499 HTN1P15515 57 aa16.69■□□□□ 0.26
HOXD9-201ENST00000249499 C2orf91Q6ZV80 131 aa16.69■□□□□ 0.26
HOXD9-201ENST00000249499 MPV17L2Q567V2 206 aa16.68■□□□□ 0.26
HOXD9-201ENST00000249499 UFSP1Q6NVU6 142 aa16.68■□□□□ 0.26
HOXD9-201ENST00000249499 TMEM141Q96I45 108 aa16.67■□□□□ 0.26
HOXD9-201ENST00000249499 RHODO00212 210 aa16.67■□□□□ 0.26
HOXD9-201ENST00000249499 BEAN1Q3B7T3 259 aa16.67■□□□□ 0.26
HOXD9-201ENST00000249499 NSUN5P1Q3KNT7 163 aa16.67■□□□□ 0.26
HOXD9-201ENST00000249499 BAALCQ8WXS3 180 aa16.67■□□□□ 0.26
HOXD9-201ENST00000249499 TIMM17AQ99595 171 aa16.67■□□□□ 0.26
HOXD9-201ENST00000249499 NEGR1Q7Z3B1 354 aa16.66■□□□□ 0.26
HOXD9-201ENST00000249499 ZNF25P17030 456 aaPredicted RBP16.65■□□□□ 0.26
HOXD9-201ENST00000249499 ZC2HC1BQ5TFG8 222 aa16.65■□□□□ 0.26
HOXD9-201ENST00000249499 CHTOPQ9Y3Y2 248 aaKnown RBP16.65■□□□□ 0.26
HOXD9-201ENST00000249499 IGIPA6NJ69 53 aa16.65■□□□□ 0.26
HOXD9-201ENST00000249499 NMUP48645 174 aa16.65■□□□□ 0.26
HOXD9-201ENST00000249499 BVES-AS1Q5T3Y7 98 aa16.65■□□□□ 0.26
HOXD9-201ENST00000249499 TP53TG1Q9Y2A0 90 aa16.65■□□□□ 0.26
HOXD9-201ENST00000249499 I3L3M4 83 aa16.64■□□□□ 0.25
HOXD9-201ENST00000249499 XCL2Q9UBD3 114 aa16.64■□□□□ 0.25
HOXD9-201ENST00000249499 C1orf158Q8N1D5 194 aa16.63■□□□□ 0.25
HOXD9-201ENST00000249499 TMEM208Q9BTX3 173 aa16.63■□□□□ 0.25
HOXD9-201ENST00000249499 GAGE1Q13065 139 aa16.63■□□□□ 0.25
HOXD9-201ENST00000249499 JMJD1CQ15652 2540 aa16.62■□□□□ 0.25
HOXD9-201ENST00000249499 CFAP126Q5VTH2 177 aa16.62■□□□□ 0.25
HOXD9-201ENST00000249499 IL17DQ8TAD2 202 aa16.62■□□□□ 0.25
HOXD9-201ENST00000249499 C2CD3Q4AC94 2353 aa16.61■□□□□ 0.25
HOXD9-201ENST00000249499 PAPPA-AS1Q5QFB9 102 aa16.61■□□□□ 0.25
HOXD9-201ENST00000249499 PCP2Q8IVA1 136 aa16.61■□□□□ 0.25
HOXD9-201ENST00000249499 C19orf73Q9NVV2 129 aa16.61■□□□□ 0.25
HOXD9-201ENST00000249499 WNK1Q9H4A3 2382 aa16.6■□□□□ 0.25
HOXD9-201ENST00000249499 PRSS29PA6NIE9 313 aa16.6■□□□□ 0.25
HOXD9-201ENST00000249499 RS1O15537 224 aa16.6■□□□□ 0.25
HOXD9-201ENST00000249499 TSHBP01222 138 aa16.6■□□□□ 0.25
HOXD9-201ENST00000249499 GTSCR1Q86UQ5 136 aa16.6■□□□□ 0.25
HOXD9-201ENST00000249499 HIGD1BQ9P298 99 aa16.6■□□□□ 0.25
HOXD9-201ENST00000249499 KRTAP10-3P60369 221 aa16.59■□□□□ 0.25
HOXD9-201ENST00000249499 TMEM97Q5BJF2 176 aa16.59■□□□□ 0.25
HOXD9-201ENST00000249499 IGKV2D-26A0A0A0MRZ7 120 aa16.59■□□□□ 0.25
HOXD9-201ENST00000249499 PRM2P04554 102 aa16.59■□□□□ 0.25
HOXD9-201ENST00000249499 TCTAP57738 103 aa16.59■□□□□ 0.25
HOXD9-201ENST00000249499 PMVKQ15126 192 aa16.59■□□□□ 0.25
HOXD9-201ENST00000249499 ORAOV1Q8WV07 137 aa16.59■□□□□ 0.25
HOXD9-201ENST00000249499 DNAJC30Q96LL9 226 aa16.59■□□□□ 0.25
HOXD9-201ENST00000249499 C1QTNF4Q9BXJ3 329 aa16.59■□□□□ 0.25
HOXD9-201ENST00000249499 HSD52Q0P140 79 aa16.58■□□□□ 0.24
HOXD9-201ENST00000249499 TMEM263Q8WUH6 116 aaKnown RBP16.58■□□□□ 0.24
HOXD9-201ENST00000249499 IGHV3-53P01767 116 aa16.57■□□□□ 0.24
HOXD9-201ENST00000249499 PF4P02776 101 aa16.57■□□□□ 0.24
HOXD9-201ENST00000249499 SEC11AP67812 179 aa16.57■□□□□ 0.24
HOXD9-201ENST00000249499 LINC00482Q8N8I6 264 aa16.57■□□□□ 0.24
HOXD9-201ENST00000249499 C20orf203Q8NBC4 194 aa16.57■□□□□ 0.24
HOXD9-201ENST00000249499 RNASE8Q8TDE3 154 aaKnown RBP16.57■□□□□ 0.24
HOXD9-201ENST00000249499 COX11Q9Y6N1 276 aa16.57■□□□□ 0.24
HOXD9-201ENST00000249499 TNFRSF18Q9Y5U5 241 aa16.56■□□□□ 0.24
HOXD9-201ENST00000249499 CRLF1O75462 422 aa16.56■□□□□ 0.24
HOXD9-201ENST00000249499 RPL39P62891 51 aaKnown RBP16.56■□□□□ 0.24
HOXD9-201ENST00000249499 MRPL16Q9NX20 251 aaKnown RBP16.56■□□□□ 0.24
HOXD9-201ENST00000249499 AZU1P20160 251 aa16.55■□□□□ 0.24
HOXD9-201ENST00000249499 P0DMU3 169 aa16.54■□□□□ 0.24
HOXD9-201ENST00000249499 FAM231AP0DMU4 169 aa16.54■□□□□ 0.24
HOXD9-201ENST00000249499 FAM231CP0DMU5 169 aa16.54■□□□□ 0.24
HOXD9-201ENST00000249499 CST9LQ9H4G1 147 aa16.54■□□□□ 0.24
HOXD9-201ENST00000249499 IGHV3-73A0A0B4J1V6 119 aa16.54■□□□□ 0.24
HOXD9-201ENST00000249499 GIG44P09565 113 aaPredicted RBP16.53■□□□□ 0.24
HOXD9-201ENST00000249499 NPSP0C0P6 89 aa16.53■□□□□ 0.24
HOXD9-201ENST00000249499 INSL3P51460 131 aa16.52■□□□□ 0.24
HOXD9-201ENST00000249499 IGHV3OR16-12A0A075B7B8 117 aa16.52■□□□□ 0.23
HOXD9-201ENST00000249499 DAZ2Q13117 558 aaKnown RBP16.52■□□□□ 0.23
HOXD9-201ENST00000249499 PYGO1Q9Y3Y4 419 aa16.52■□□□□ 0.23
HOXD9-201ENST00000249499 E9PLD3 99 aa16.51■□□□□ 0.23
HOXD9-201ENST00000249499 NACAE9PAV3 2078 aa16.5■□□□□ 0.23
HOXD9-201ENST00000249499 IGLV4-69A0A075B6H9 119 aa16.5■□□□□ 0.23
HOXD9-201ENST00000249499 A6NDN8 102 aa16.5■□□□□ 0.23
HOXD9-201ENST00000249499 CRYBA4P53673 196 aa16.5■□□□□ 0.23
HOXD9-201ENST00000249499 OR11H2Q8NH07 326 aa16.5■□□□□ 0.23
HOXD9-201ENST00000249499 C16orf74Q96GX8 76 aa16.5■□□□□ 0.23
HOXD9-201ENST00000249499 Q6ZSN1 163 aa16.5■□□□□ 0.23
HOXD9-201ENST00000249499 TRBV25-1A0A075B6N4 114 aa16.49■□□□□ 0.23
HOXD9-201ENST00000249499 TAX1BP3O14907 124 aa16.49■□□□□ 0.23
HOXD9-201ENST00000249499 OR4C5Q8NGB2 326 aa16.49■□□□□ 0.23
HOXD9-201ENST00000249499 CSNK1G2-AS1Q8NCQ2 148 aa16.48■□□□□ 0.23
HOXD9-201ENST00000249499 TRGV1A0A0A0MS02 117 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms